EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002661 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 9617 bases
Position: chrQKWQ01001844.1:10723945-10733561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003152	APOBEC_N	PF08210.11	8.1e-37	1	1
ENSCAFP00020003164	APOBEC_N	PF08210.11	1.6e-35	1	1
ENSCAFP00020003164	APOBEC_C	PF05240.14	4.2e-28	1	1
ENSCAFP00020003152	APOBEC_C	PF05240.14	4.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003681	-	681	-	ENSCAFP00020003164	226 (aa)	-	-
ENSCAFT00020003666	-	693	-	ENSCAFP00020003152	230 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002661	-	78	32.178	ENSCAFG00020008306	APOBEC2	78	34.831
ENSCAFG00020002661	-	87	32.367	ENSCAFG00020002584	-	92	37.640
ENSCAFG00020002661	-	53	30.159	ENSCAFG00020003511	APOBEC1	53	30.159
ENSCAFG00020002661	-	80	35.979	ENSCAFG00020003515	AICDA	90	37.222
ENSCAFG00020002661	-	100	97.403	ENSCAFG00020002641	-	100	97.403
ENSCAFG00020002661	-	53	44.000	ENSCAFG00020002615	-	65	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002661	-	81	43.842	ENSG00000239713	APOBEC3G	95	46.524	Homo_sapiens
ENSCAFG00020002661	-	84	49.767	ENSAMEG00000010815	-	90	52.709	Ailuropoda_melanoleuca
ENSCAFG00020002661	-	80	42.246	ENSANAG00000028416	-	97	42.781	Aotus_nancymaae
ENSCAFG00020002661	-	80	46.392	ENSANAG00000031271	APOBEC3G	97	46.392	Aotus_nancymaae
ENSCAFG00020002661	-	78	43.169	ENSANAG00000027961	-	96	43.169	Aotus_nancymaae
ENSCAFG00020002661	-	83	46.000	ENSANAG00000020573	-	98	46.193	Aotus_nancymaae
ENSCAFG00020002661	-	80	48.404	ENSBTAG00000037800	-	100	46.486	Bos_taurus
ENSCAFG00020002661	-	80	44.792	ENSCJAG00000023368	APOBEC3G	96	45.361	Callithrix_jacchus
ENSCAFG00020002661	-	78	44.324	ENSCJAG00000011578	-	75	43.850	Callithrix_jacchus
ENSCAFG00020002661	-	54	98.387	ENSCAFG00000023589	-	89	98.387	Canis_familiaris
ENSCAFG00020002661	-	80	81.726	ENSCAFG00000015211	-	66	82.412	Canis_familiaris
ENSCAFG00020002661	-	84	47.475	ENSCHIG00000012694	-	98	48.223	Capra_hircus
ENSCAFG00020002661	-	83	46.193	ENSCCAG00000030928	-	95	46.734	Cebus_capucinus
ENSCAFG00020002661	-	81	44.103	ENSCCAG00000033147	-	97	42.788	Cebus_capucinus
ENSCAFG00020002661	-	80	44.330	ENSCCAG00000032232	-	91	43.617	Cebus_capucinus
ENSCAFG00020002661	-	80	41.237	ENSCCAG00000032509	-	98	41.237	Cebus_capucinus
ENSCAFG00020002661	-	85	38.983	ENSCSAG00000006376	APOBEC3G	80	40.491	Chlorocebus_sabaeus
ENSCAFG00020002661	-	63	32.121	ENSCANG00000029968	-	50	32.121	Colobus_angolensis_palliatus
ENSCAFG00020002661	-	85	38.350	ENSDNOG00000039749	-	93	38.350	Dasypus_novemcinctus
ENSCAFG00020002661	-	80	49.733	ENSEASG00005018643	-	83	50.000	Equus_asinus_asinus
ENSCAFG00020002661	-	87	46.445	ENSECAG00000032756	-	71	49.505	Equus_caballus
ENSCAFG00020002661	-	80	46.524	ENSECAG00000022371	APOBEC3Z1B	88	46.500	Equus_caballus
ENSCAFG00020002661	-	79	43.333	ENSGGOG00000013750	APOBEC3G	95	43.333	Gorilla_gorilla
ENSCAFG00020002661	-	82	42.708	ENSLAFG00000008890	-	90	46.409	Loxodonta_africana
ENSCAFG00020002661	-	80	44.041	ENSLAFG00000005275	-	99	46.629	Loxodonta_africana
ENSCAFG00020002661	-	83	41.451	ENSLAFG00000020906	-	94	40.404	Loxodonta_africana
ENSCAFG00020002661	-	94	39.004	ENSMFAG00000044711	APOBEC3G	92	41.743	Macaca_fascicularis
ENSCAFG00020002661	-	84	44.949	ENSMMUG00000039346	APOBEC3G	96	42.857	Macaca_mulatta
ENSCAFG00020002661	-	89	40.435	ENSMNEG00000038847	APOBEC3G	94	45.455	Macaca_nemestrina
ENSCAFG00020002661	-	84	44.724	ENSMLEG00000024444	APOBEC3G	96	43.137	Mandrillus_leucophaeus
ENSCAFG00020002661	-	80	41.885	ENSMICG00000047191	-	98	41.885	Microcebus_murinus
ENSCAFG00020002661	-	82	44.330	ENSMICG00000043748	-	95	44.898	Microcebus_murinus
ENSCAFG00020002661	-	80	48.634	ENSMPUG00000013235	-	93	48.876	Mustela_putorius_furo
ENSCAFG00020002661	-	83	38.860	ENSMLUG00000014565	-	100	38.860	Myotis_lucifugus
ENSCAFG00020002661	-	50	42.857	ENSMLUG00000022226	-	98	43.182	Myotis_lucifugus
ENSCAFG00020002661	-	79	37.433	ENSMLUG00000000517	-	100	38.418	Myotis_lucifugus
ENSCAFG00020002661	-	87	42.568	ENSMLUG00000008631	-	97	42.568	Myotis_lucifugus
ENSCAFG00020002661	-	78	35.829	ENSMLUG00000028652	-	84	36.126	Myotis_lucifugus
ENSCAFG00020002661	-	80	36.842	ENSMLUG00000023022	-	93	36.765	Myotis_lucifugus
ENSCAFG00020002661	-	73	43.810	ENSMLUG00000026771	-	75	37.870	Myotis_lucifugus
ENSCAFG00020002661	-	81	40.884	ENSMLUG00000000977	-	95	41.899	Myotis_lucifugus
ENSCAFG00020002661	-	85	42.105	ENSMLUG00000024853	-	100	42.105	Myotis_lucifugus
ENSCAFG00020002661	-	80	38.624	ENSMLUG00000024957	-	95	40.000	Myotis_lucifugus
ENSCAFG00020002661	-	79	44.186	ENSNLEG00000018922	-	95	44.186	Nomascus_leucogenys
ENSCAFG00020002661	-	80	35.602	ENSOPRG00000002326	-	98	38.547	Ochotona_princeps
ENSCAFG00020002661	-	70	38.554	ENSOCUG00000023532	-	64	41.975	Oryctolagus_cuniculus
ENSCAFG00020002661	-	80	46.032	ENSOGAG00000032518	-	98	47.644	Otolemur_garnettii
ENSCAFG00020002661	-	81	42.640	ENSOGAG00000024822	-	96	42.640	Otolemur_garnettii
ENSCAFG00020002661	-	80	48.128	ENSOARG00000016213	APOBEC3Z1	100	46.237	Ovis_aries
ENSCAFG00020002661	-	81	43.137	ENSPPAG00000033277	-	78	45.366	Pan_paniscus
ENSCAFG00020002661	-	84	42.453	ENSPTRG00000014387	APOBEC3G	96	45.455	Pan_troglodytes
ENSCAFG00020002661	-	84	44.221	ENSPPYG00000011833	APOBEC3G	90	44.221	Pongo_abelii
ENSCAFG00020002661	-	80	42.400	ENSPCAG00000015518	-	83	38.298	Procavia_capensis
ENSCAFG00020002661	-	54	45.600	ENSPCAG00000001848	-	91	45.600	Procavia_capensis
ENSCAFG00020002661	-	79	41.489	ENSPCOG00000016357	-	90	41.489	Propithecus_coquereli
ENSCAFG00020002661	-	83	45.833	ENSPVAG00000004045	-	95	46.842	Pteropus_vampyrus
ENSCAFG00020002661	-	84	43.939	ENSRBIG00000035436	APOBEC3G	90	44.444	Rhinopithecus_bieti
ENSCAFG00020002661	-	80	43.684	ENSSBOG00000025673	-	87	43.684	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	83	48.241	ENSSBOG00000029091	-	95	48.241	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	80	45.876	ENSSBOG00000026566	-	97	45.876	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	80	47.120	ENSSBOG00000021384	-	95	47.120	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	93	41.057	ENSSBOG00000023468	-	89	41.057	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	80	44.211	ENSSBOG00000018208	-	98	44.211	Saimiri_boliviensis_boliviensis
ENSCAFG00020002661	-	82	48.677	ENSTTRG00000009395	-	95	48.677	Tursiops_truncatus
ENSCAFG00020002661	-	80	49.754	ENSUMAG00000014447	-	94	53.476	Ursus_maritimus
ENSCAFG00020002661	-	83	51.759	ENSUMAG00000002249	-	88	55.000	Ursus_maritimus