EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020002715 (Gene tree)
Gene ID: 112663435
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 54556 bases
Position: chrQKWQ01000458.1:14912451-14967006
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020004233	Suf	PF05843.14	9.8e-85	1	1
ENSCAFP00020004211	Suf	PF05843.14	2.2e-84	1	1
ENSCAFP00020004248	Suf	PF05843.14	6.8e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020004895	CSTF3-202	2148	-	ENSCAFP00020004233	715 (aa)	-	-
ENSCAFT00020004873	CSTF3-201	2160	-	ENSCAFP00020004211	719 (aa)	-	-
ENSCAFT00020004912	CSTF3-203	2121	-	ENSCAFP00020004248	706 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002715	CSTF3	99	100.000	ENSG00000176102	CSTF3	99	100.000	Homo_sapiens
ENSCAFG00020002715	CSTF3	98	91.949	ENSAPOG00000014054	cstf3	99	91.949	Acanthochromis_polyacanthus
ENSCAFG00020002715	CSTF3	100	99.722	ENSAMEG00000007187	CSTF3	99	99.722	Ailuropoda_melanoleuca
ENSCAFG00020002715	CSTF3	89	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSCAFG00020002715	CSTF3	98	91.667	ENSAOCG00000010930	cstf3	99	91.667	Amphiprion_ocellaris
ENSCAFG00020002715	CSTF3	98	91.667	ENSAPEG00000007903	cstf3	99	91.667	Amphiprion_percula
ENSCAFG00020002715	CSTF3	98	91.949	ENSATEG00000000190	cstf3	99	91.949	Anabas_testudineus
ENSCAFG00020002715	CSTF3	98	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSCAFG00020002715	CSTF3	99	96.333	ENSACAG00000002823	CSTF3	99	96.333	Anolis_carolinensis
ENSCAFG00020002715	CSTF3	99	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSCAFG00020002715	CSTF3	98	91.773	ENSACLG00000007820	cstf3	99	91.808	Astatotilapia_calliptera
ENSCAFG00020002715	CSTF3	99	91.268	ENSAMXG00000014198	cstf3	99	91.549	Astyanax_mexicanus
ENSCAFG00020002715	CSTF3	99	100.000	ENSBTAG00000008617	CSTF3	100	100.000	Bos_taurus
ENSCAFG00020002715	CSTF3	97	49.313	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSCAFG00020002715	CSTF3	99	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSCAFG00020002715	CSTF3	99	100.000	ENSCAFG00000007264	CSTF3	99	100.000	Canis_familiaris
ENSCAFG00020002715	CSTF3	98	100.000	ENSCHIG00000016418	CSTF3	100	100.000	Capra_hircus
ENSCAFG00020002715	CSTF3	99	99.577	ENSTSYG00000000451	CSTF3	100	99.577	Carlito_syrichta
ENSCAFG00020002715	CSTF3	83	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSCAFG00020002715	CSTF3	99	99.718	ENSCPOG00000005545	CSTF3	99	99.718	Cavia_porcellus
ENSCAFG00020002715	CSTF3	99	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSCAFG00020002715	CSTF3	99	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSCAFG00020002715	CSTF3	99	100.000	ENSCLAG00000016179	CSTF3	99	100.000	Chinchilla_lanigera
ENSCAFG00020002715	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSCAFG00020002715	CSTF3	99	97.884	ENSCPBG00000006753	CSTF3	99	97.884	Chrysemys_picta_bellii
ENSCAFG00020002715	CSTF3	99	61.119	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSCAFG00020002715	CSTF3	98	61.785	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSCAFG00020002715	CSTF3	99	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSCAFG00020002715	CSTF3	99	99.577	ENSCGRG00001014773	Cstf3	99	99.577	Cricetulus_griseus_chok1gshd
ENSCAFG00020002715	CSTF3	99	99.577	ENSCGRG00000004142	Cstf3	99	99.577	Cricetulus_griseus_crigri
ENSCAFG00020002715	CSTF3	99	91.678	ENSCSEG00000014283	cstf3	99	91.678	Cynoglossus_semilaevis
ENSCAFG00020002715	CSTF3	98	90.819	ENSCVAG00000019739	cstf3	99	90.819	Cyprinodon_variegatus
ENSCAFG00020002715	CSTF3	99	91.678	ENSDARG00000018904	cstf3	99	91.678	Danio_rerio
ENSCAFG00020002715	CSTF3	99	99.298	ENSDNOG00000007366	CSTF3	99	99.298	Dasypus_novemcinctus
ENSCAFG00020002715	CSTF3	99	91.961	ENSDORG00000005898	Cstf3	99	92.102	Dipodomys_ordii
ENSCAFG00020002715	CSTF3	98	57.025	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSCAFG00020002715	CSTF3	85	99.331	ENSETEG00000017097	CSTF3	90	94.237	Echinops_telfairi
ENSCAFG00020002715	CSTF3	84	75.421	ENSEBUG00000015459	cstf3	96	75.421	Eptatretus_burgeri
ENSCAFG00020002715	CSTF3	99	98.449	ENSEASG00005019884	CSTF3	100	99.857	Equus_asinus_asinus
ENSCAFG00020002715	CSTF3	99	98.449	ENSECAG00000023338	CSTF3	100	99.857	Equus_caballus
ENSCAFG00020002715	CSTF3	99	94.217	ENSEEUG00000015167	CSTF3	99	94.217	Erinaceus_europaeus
ENSCAFG00020002715	CSTF3	99	90.409	ENSELUG00000023393	cstf3	99	90.409	Esox_lucius
ENSCAFG00020002715	CSTF3	99	99.859	ENSFCAG00000030711	CSTF3	99	99.859	Felis_catus
ENSCAFG00020002715	CSTF3	93	98.501	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSCAFG00020002715	CSTF3	99	99.859	ENSFDAG00000012082	CSTF3	99	99.859	Fukomys_damarensis
ENSCAFG00020002715	CSTF3	98	90.960	ENSFHEG00000020623	cstf3	99	90.960	Fundulus_heteroclitus
ENSCAFG00020002715	CSTF3	98	89.986	ENSGMOG00000012275	cstf3	99	89.986	Gadus_morhua
ENSCAFG00020002715	CSTF3	99	98.449	ENSGALG00000011685	CSTF3	99	98.449	Gallus_gallus
ENSCAFG00020002715	CSTF3	98	91.243	ENSGAFG00000002181	cstf3	99	91.243	Gambusia_affinis
ENSCAFG00020002715	CSTF3	98	91.243	ENSGACG00000015997	cstf3	99	91.243	Gasterosteus_aculeatus
ENSCAFG00020002715	CSTF3	99	97.884	ENSGAGG00000006200	CSTF3	99	97.884	Gopherus_agassizii
ENSCAFG00020002715	CSTF3	99	95.429	ENSGGOG00000026591	CSTF3	99	95.429	Gorilla_gorilla
ENSCAFG00020002715	CSTF3	98	91.773	ENSHBUG00000016656	cstf3	99	91.808	Haplochromis_burtoni
ENSCAFG00020002715	CSTF3	99	99.718	ENSHGLG00000017834	CSTF3	99	99.718	Heterocephalus_glaber_female
ENSCAFG00020002715	CSTF3	99	99.718	ENSHGLG00100018042	CSTF3	100	99.579	Heterocephalus_glaber_male
ENSCAFG00020002715	CSTF3	98	89.886	ENSHCOG00000015218	cstf3	99	89.915	Hippocampus_comes
ENSCAFG00020002715	CSTF3	99	90.832	ENSIPUG00000013170	CSTF3	99	90.832	Ictalurus_punctatus
ENSCAFG00020002715	CSTF3	99	100.000	ENSSTOG00000013306	CSTF3	99	100.000	Ictidomys_tridecemlineatus
ENSCAFG00020002715	CSTF3	99	87.692	ENSJJAG00000018430	Cstf3	99	87.692	Jaculus_jaculus
ENSCAFG00020002715	CSTF3	98	90.819	ENSKMAG00000010916	cstf3	99	90.819	Kryptolebias_marmoratus
ENSCAFG00020002715	CSTF3	98	90.819	ENSLBEG00000002306	cstf3	99	90.819	Labrus_bergylta
ENSCAFG00020002715	CSTF3	99	94.358	ENSLACG00000017296	CSTF3	99	94.358	Latimeria_chalumnae
ENSCAFG00020002715	CSTF3	99	93.653	ENSLOCG00000004415	cstf3	99	93.653	Lepisosteus_oculatus
ENSCAFG00020002715	CSTF3	99	99.718	ENSLAFG00000008712	CSTF3	99	99.718	Loxodonta_africana
ENSCAFG00020002715	CSTF3	99	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSCAFG00020002715	CSTF3	99	100.000	ENSMMUG00000002542	CSTF3	99	100.000	Macaca_mulatta
ENSCAFG00020002715	CSTF3	99	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSCAFG00020002715	CSTF3	99	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSCAFG00020002715	CSTF3	99	91.535	ENSMAMG00000020423	cstf3	99	91.667	Mastacembelus_armatus
ENSCAFG00020002715	CSTF3	99	91.155	ENSMZEG00005012082	cstf3	99	91.808	Maylandia_zebra
ENSCAFG00020002715	CSTF3	99	98.449	ENSMGAG00000001383	CSTF3	99	98.449	Meleagris_gallopavo
ENSCAFG00020002715	CSTF3	99	99.436	ENSMAUG00000002487	Cstf3	99	99.436	Mesocricetus_auratus
ENSCAFG00020002715	CSTF3	99	99.718	ENSMICG00000004784	CSTF3	100	99.680	Microcebus_murinus
ENSCAFG00020002715	CSTF3	99	99.577	ENSMOCG00000017583	Cstf3	99	99.577	Microtus_ochrogaster
ENSCAFG00020002715	CSTF3	98	91.384	ENSMMOG00000016026	cstf3	94	91.384	Mola_mola
ENSCAFG00020002715	CSTF3	99	98.872	ENSMODG00000009745	-	99	98.872	Monodelphis_domestica
ENSCAFG00020002715	CSTF3	98	84.724	ENSMODG00000025205	-	99	84.724	Monodelphis_domestica
ENSCAFG00020002715	CSTF3	98	91.384	ENSMALG00000012050	cstf3	99	91.384	Monopterus_albus
ENSCAFG00020002715	CSTF3	99	99.577	MGP_CAROLIEiJ_G0024026	Cstf3	99	99.577	Mus_caroli
ENSCAFG00020002715	CSTF3	99	99.577	ENSMUSG00000027176	Cstf3	99	99.577	Mus_musculus
ENSCAFG00020002715	CSTF3	99	99.577	MGP_PahariEiJ_G0025464	Cstf3	99	99.577	Mus_pahari
ENSCAFG00020002715	CSTF3	99	99.577	MGP_SPRETEiJ_G0024939	Cstf3	99	99.577	Mus_spretus
ENSCAFG00020002715	CSTF3	99	99.859	ENSMPUG00000011457	CSTF3	99	99.859	Mustela_putorius_furo
ENSCAFG00020002715	CSTF3	99	96.474	ENSMLUG00000026022	-	99	96.474	Myotis_lucifugus
ENSCAFG00020002715	CSTF3	99	99.024	ENSMLUG00000003073	-	99	99.024	Myotis_lucifugus
ENSCAFG00020002715	CSTF3	99	99.577	ENSNGAG00000010677	Cstf3	99	99.577	Nannospalax_galili
ENSCAFG00020002715	CSTF3	89	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSCAFG00020002715	CSTF3	99	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSCAFG00020002715	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSCAFG00020002715	CSTF3	67	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSCAFG00020002715	CSTF3	99	99.859	ENSODEG00000016737	-	100	99.858	Octodon_degus
ENSCAFG00020002715	CSTF3	99	81.662	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSCAFG00020002715	CSTF3	98	91.773	ENSONIG00000005563	cstf3	99	91.808	Oreochromis_niloticus
ENSCAFG00020002715	CSTF3	90	97.634	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSCAFG00020002715	CSTF3	99	99.718	ENSOCUG00000015417	CSTF3	99	99.718	Oryctolagus_cuniculus
ENSCAFG00020002715	CSTF3	99	91.114	ENSORLG00000009762	cstf3	99	91.114	Oryzias_latipes
ENSCAFG00020002715	CSTF3	99	91.114	ENSORLG00020005540	cstf3	99	91.114	Oryzias_latipes_hni
ENSCAFG00020002715	CSTF3	99	91.092	ENSORLG00015003551	cstf3	99	91.092	Oryzias_latipes_hsok
ENSCAFG00020002715	CSTF3	98	90.806	ENSOMEG00000003848	cstf3	99	90.806	Oryzias_melastigma
ENSCAFG00020002715	CSTF3	99	99.438	ENSOGAG00000010229	CSTF3	99	99.438	Otolemur_garnettii
ENSCAFG00020002715	CSTF3	90	99.842	ENSOARG00000017271	CSTF3	99	99.844	Ovis_aries
ENSCAFG00020002715	CSTF3	99	97.714	ENSPPAG00000027358	CSTF3	99	97.714	Pan_paniscus
ENSCAFG00020002715	CSTF3	99	99.859	ENSPPRG00000016852	CSTF3	99	99.859	Panthera_pardus
ENSCAFG00020002715	CSTF3	99	99.859	ENSPTIG00000008716	CSTF3	99	99.859	Panthera_tigris_altaica
ENSCAFG00020002715	CSTF3	99	100.000	ENSPTRG00000003485	CSTF3	99	100.000	Pan_troglodytes
ENSCAFG00020002715	CSTF3	99	100.000	ENSPANG00000013722	CSTF3	99	100.000	Papio_anubis
ENSCAFG00020002715	CSTF3	99	92.948	ENSPKIG00000023648	cstf3	99	92.948	Paramormyrops_kingsleyae
ENSCAFG00020002715	CSTF3	99	97.461	ENSPSIG00000009173	CSTF3	99	97.461	Pelodiscus_sinensis
ENSCAFG00020002715	CSTF3	75	95.733	ENSPMGG00000000164	cstf3	98	95.733	Periophthalmus_magnuspinnatus
ENSCAFG00020002715	CSTF3	99	99.436	ENSPEMG00000011481	Cstf3	99	99.436	Peromyscus_maniculatus_bairdii
ENSCAFG00020002715	CSTF3	99	79.354	ENSPMAG00000007282	cstf3	99	79.887	Petromyzon_marinus
ENSCAFG00020002715	CSTF3	99	81.408	ENSPCIG00000030419	-	89	82.113	Phascolarctos_cinereus
ENSCAFG00020002715	CSTF3	100	95.278	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSCAFG00020002715	CSTF3	98	91.384	ENSPFOG00000017239	cstf3	99	91.384	Poecilia_formosa
ENSCAFG00020002715	CSTF3	98	91.384	ENSPLAG00000009456	cstf3	99	91.384	Poecilia_latipinna
ENSCAFG00020002715	CSTF3	98	91.384	ENSPMEG00000010320	cstf3	99	91.384	Poecilia_mexicana
ENSCAFG00020002715	CSTF3	99	91.248	ENSPREG00000013549	cstf3	99	91.384	Poecilia_reticulata
ENSCAFG00020002715	CSTF3	99	100.000	ENSPPYG00000003375	CSTF3	99	100.000	Pongo_abelii
ENSCAFG00020002715	CSTF3	70	100.000	ENSPCAG00000008025	-	70	100.000	Procavia_capensis
ENSCAFG00020002715	CSTF3	99	95.989	ENSPCOG00000014417	CSTF3	99	95.989	Propithecus_coquereli
ENSCAFG00020002715	CSTF3	99	94.499	ENSPVAG00000002350	CSTF3	99	94.499	Pteropus_vampyrus
ENSCAFG00020002715	CSTF3	99	91.155	ENSPNYG00000018259	cstf3	99	91.808	Pundamilia_nyererei
ENSCAFG00020002715	CSTF3	99	92.666	ENSPNAG00000020182	cstf3	99	92.666	Pygocentrus_nattereri
ENSCAFG00020002715	CSTF3	89	99.200	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSCAFG00020002715	CSTF3	99	98.453	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSCAFG00020002715	CSTF3	99	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSCAFG00020002715	CSTF3	99	100.000	ENSSBOG00000024764	CSTF3	100	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00020002715	CSTF3	99	85.290	ENSSHAG00000003135	-	98	86.139	Sarcophilus_harrisii
ENSCAFG00020002715	CSTF3	99	98.315	ENSSHAG00000018128	-	99	98.315	Sarcophilus_harrisii
ENSCAFG00020002715	CSTF3	99	92.807	ENSSFOG00015022133	cstf3	99	92.807	Scleropages_formosus
ENSCAFG00020002715	CSTF3	98	90.960	ENSSMAG00000002197	cstf3	99	90.960	Scophthalmus_maximus
ENSCAFG00020002715	CSTF3	98	91.808	ENSSDUG00000020426	cstf3	99	91.808	Seriola_dumerili
ENSCAFG00020002715	CSTF3	98	91.808	ENSSLDG00000025649	cstf3	99	91.808	Seriola_lalandi_dorsalis
ENSCAFG00020002715	CSTF3	99	99.577	ENSSARG00000000391	CSTF3	99	99.577	Sorex_araneus
ENSCAFG00020002715	CSTF3	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSCAFG00020002715	CSTF3	98	91.808	ENSSPAG00000004958	cstf3	99	91.808	Stegastes_partitus
ENSCAFG00020002715	CSTF3	99	99.859	ENSSSCG00000040954	CSTF3	99	99.859	Sus_scrofa
ENSCAFG00020002715	CSTF3	98	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSCAFG00020002715	CSTF3	98	90.537	ENSTRUG00000004959	cstf3	99	90.537	Takifugu_rubripes
ENSCAFG00020002715	CSTF3	98	90.960	ENSTNIG00000013811	cstf3	98	90.960	Tetraodon_nigroviridis
ENSCAFG00020002715	CSTF3	90	96.203	ENSTBEG00000001544	CSTF3	90	96.417	Tupaia_belangeri
ENSCAFG00020002715	CSTF3	99	96.897	ENSTTRG00000016366	CSTF3	99	96.897	Tursiops_truncatus
ENSCAFG00020002715	CSTF3	100	99.583	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSCAFG00020002715	CSTF3	99	99.859	ENSVPAG00000007800	CSTF3	99	99.859	Vicugna_pacos
ENSCAFG00020002715	CSTF3	100	100.000	ENSVVUG00000014938	CSTF3	100	100.000	Vulpes_vulpes
ENSCAFG00020002715	CSTF3	87	80.449	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSCAFG00020002715	CSTF3	66	43.685	ENSXETG00000017946	-	99	43.685	Xenopus_tropicalis
ENSCAFG00020002715	CSTF3	89	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSCAFG00020002715	CSTF3	98	91.384	ENSXMAG00000009545	cstf3	99	91.384	Xiphophorus_maculatus