EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1976 bases
Position: chrQKWQ01000528.1:16750157-16752132
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003194	KH_1	PF00013.29	3.7e-10	1	1
ENSCAFP00020003194	DEAD	PF00270.29	5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003718	-	1806	-	ENSCAFP00020003194	601 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002717	-	70	32.870	ENSCAFG00020003753	DDX52	71	32.870
ENSCAFG00020002717	-	60	30.513	ENSCAFG00020019785	DDX28	73	30.513
ENSCAFG00020002717	-	58	30.542	ENSCAFG00020024548	DDX31	59	30.542
ENSCAFG00020002717	-	75	43.584	ENSCAFG00020026563	DDX5	73	43.261
ENSCAFG00020002717	-	57	31.856	ENSCAFG00020015254	DDX55	65	31.856
ENSCAFG00020002717	-	59	32.231	ENSCAFG00020008055	DDX20	84	30.208
ENSCAFG00020002717	-	60	34.184	ENSCAFG00020014114	DDX18	56	34.184
ENSCAFG00020002717	-	56	35.143	ENSCAFG00020025973	-	95	35.143
ENSCAFG00020002717	-	73	31.532	ENSCAFG00020018385	DDX59	69	31.532
ENSCAFG00020002717	-	59	32.402	ENSCAFG00020007858	EIF4A1	94	32.402
ENSCAFG00020002717	-	64	42.169	ENSCAFG00020013383	DDX23	50	42.169
ENSCAFG00020002717	-	68	37.232	ENSCAFG00020012019	DDX41	65	37.232
ENSCAFG00020002717	-	99	92.236	ENSCAFG00020010029	-	99	92.236
ENSCAFG00020002717	-	60	36.605	ENSCAFG00020017143	DDX27	50	36.605
ENSCAFG00020002717	-	61	40.318	ENSCAFG00020024295	DDX4	57	40.318
ENSCAFG00020002717	-	66	34.328	ENSCAFG00020006612	DDX47	85	34.761
ENSCAFG00020002717	-	60	75.758	ENSCAFG00020005312	-	78	75.549
ENSCAFG00020002717	-	59	32.312	ENSCAFG00020006146	EIF4A2	86	32.312
ENSCAFG00020002717	-	72	43.478	ENSCAFG00020002867	DDX17	85	43.869
ENSCAFG00020002717	-	59	33.708	ENSCAFG00020013150	DDX6	72	33.708
ENSCAFG00020002717	-	62	40.306	ENSCAFG00020027227	DDX3X	59	40.306
ENSCAFG00020002717	-	56	32.743	ENSCAFG00020008253	EIF4A3	81	32.743
ENSCAFG00020002717	-	57	34.943	ENSCAFG00020012375	DDX49	54	34.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002717	-	99	82.716	ENSAMEG00000007851	-	99	82.716	Ailuropoda_melanoleuca
ENSCAFG00020002717	-	99	73.635	ENSBTAG00000021814	-	99	73.635	Bos_taurus
ENSCAFG00020002717	-	99	73.791	ENSCHIG00000017351	-	99	73.791	Capra_hircus
ENSCAFG00020002717	-	79	74.316	ENSCAPG00000004247	-	94	74.316	Cavia_aperea
ENSCAFG00020002717	-	99	75.776	ENSCPOG00000003991	-	99	75.776	Cavia_porcellus
ENSCAFG00020002717	-	99	68.576	ENSCLAG00000010261	-	99	68.576	Chinchilla_lanigera
ENSCAFG00020002717	-	66	77.219	ENSCHOG00000003450	-	70	77.219	Choloepus_hoffmanni
ENSCAFG00020002717	-	99	75.311	ENSCGRG00001001145	Ddx43	99	75.311	Cricetulus_griseus_chok1gshd
ENSCAFG00020002717	-	86	77.975	ENSCGRG00000010217	Ddx43	100	77.975	Cricetulus_griseus_crigri
ENSCAFG00020002717	-	100	77.350	ENSDNOG00000017589	-	99	77.266	Dasypus_novemcinctus
ENSCAFG00020002717	-	99	76.589	ENSDORG00000030010	Ddx43	99	76.589	Dipodomys_ordii
ENSCAFG00020002717	-	80	86.391	ENSETEG00000001887	-	75	86.391	Echinops_telfairi
ENSCAFG00020002717	-	99	77.864	ENSEASG00005004346	-	89	77.864	Equus_asinus_asinus
ENSCAFG00020002717	-	99	77.709	ENSECAG00000017971	DDX43	98	77.709	Equus_caballus
ENSCAFG00020002717	-	99	80.000	ENSFCAG00000031631	-	99	80.000	Felis_catus
ENSCAFG00020002717	-	86	74.956	ENSHGLG00000001118	-	100	74.956	Heterocephalus_glaber_female
ENSCAFG00020002717	-	97	72.160	ENSHGLG00100011895	-	99	72.152	Heterocephalus_glaber_male
ENSCAFG00020002717	-	86	67.496	ENSSTOG00000032538	-	100	67.496	Ictidomys_tridecemlineatus
ENSCAFG00020002717	-	99	75.311	ENSJJAG00000014184	Ddx43	99	75.311	Jaculus_jaculus
ENSCAFG00020002717	-	93	77.944	ENSLAFG00000012755	-	100	77.944	Loxodonta_africana
ENSCAFG00020002717	-	99	74.845	ENSMAUG00000001441	Ddx43	99	74.845	Mesocricetus_auratus
ENSCAFG00020002717	-	99	74.613	ENSMOCG00000012956	Ddx43	99	74.613	Microtus_ochrogaster
ENSCAFG00020002717	-	99	75.155	MGP_CAROLIEiJ_G0032467	Ddx43	99	75.155	Mus_caroli
ENSCAFG00020002717	-	99	75.466	ENSMUSG00000070291	Ddx43	99	75.466	Mus_musculus
ENSCAFG00020002717	-	99	73.877	MGP_PahariEiJ_G0015333	Ddx43	99	74.167	Mus_pahari
ENSCAFG00020002717	-	99	75.466	MGP_SPRETEiJ_G0033607	Ddx43	99	75.466	Mus_spretus
ENSCAFG00020002717	-	99	83.101	ENSMPUG00000004342	-	99	83.101	Mustela_putorius_furo
ENSCAFG00020002717	-	99	77.966	ENSMLUG00000017604	-	99	77.966	Myotis_lucifugus
ENSCAFG00020002717	-	99	75.894	ENSNGAG00000015102	Ddx43	99	76.087	Nannospalax_galili
ENSCAFG00020002717	-	73	80.357	ENSOPRG00000013523	-	86	80.357	Ochotona_princeps
ENSCAFG00020002717	-	83	75.322	ENSODEG00000016207	-	99	75.322	Octodon_degus
ENSCAFG00020002717	-	98	69.048	ENSOCUG00000025811	-	97	69.048	Oryctolagus_cuniculus
ENSCAFG00020002717	-	99	73.053	ENSOCUG00000006338	-	99	73.053	Oryctolagus_cuniculus
ENSCAFG00020002717	-	99	73.167	ENSOARG00000010873	-	99	73.167	Ovis_aries
ENSCAFG00020002717	-	99	80.465	ENSPTIG00000017842	-	99	80.465	Panthera_tigris_altaica
ENSCAFG00020002717	-	86	78.330	ENSPEMG00000023986	Ddx43	100	78.330	Peromyscus_maniculatus_bairdii
ENSCAFG00020002717	-	99	75.311	ENSPCAG00000005962	-	99	75.466	Procavia_capensis
ENSCAFG00020002717	-	86	80.496	ENSPVAG00000012718	-	99	80.496	Pteropus_vampyrus
ENSCAFG00020002717	-	99	75.311	ENSRNOG00000050868	Ddx43	99	75.311	Rattus_norvegicus
ENSCAFG00020002717	-	83	77.514	ENSSARG00000013493	-	99	77.514	Sorex_araneus
ENSCAFG00020002717	-	99	76.568	ENSSSCG00000004287	-	99	76.733	Sus_scrofa
ENSCAFG00020002717	-	86	69.162	ENSTTRG00000001488	-	99	69.162	Tursiops_truncatus
ENSCAFG00020002717	-	82	78.967	ENSUAMG00000012894	-	82	78.967	Ursus_americanus
ENSCAFG00020002717	-	99	82.972	ENSUMAG00000012291	-	99	82.972	Ursus_maritimus
ENSCAFG00020002717	-	94	70.132	ENSVPAG00000004969	-	99	69.802	Vicugna_pacos
ENSCAFG00020002717	-	99	97.830	ENSVVUG00000013908	-	99	97.830	Vulpes_vulpes