EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002879 (Gene tree)
Gene ID: 112660173
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 142071 bases
Position: chrQKWQ01000243.1:21744064-21886134
Accession: 112660173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003606	ResIII	PF04851.15	6.5e-06	1	1
ENSCAFP00020003612	BRK	PF07533.16	1.2e-31	1	2
ENSCAFP00020003612	BRK	PF07533.16	1.2e-31	2	2
ENSCAFP00020003606	BRK	PF07533.16	1.3e-30	1	2
ENSCAFP00020003606	BRK	PF07533.16	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020004186	CHD9-202	2898	-	ENSCAFP00020003612	965 (aa)	-	-
ENSCAFT00020004179	CHD9-201	8709	-	ENSCAFP00020003606	2902 (aa)	XP_025303367	UPI000184A2FA

Gene Model

Click here to download ENSCAFG00020002879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002879	CHD9	65	68.294	ENSCAFG00020014565	CHD8	87	77.619
ENSCAFG00020002879	CHD9	68	64.348	ENSCAFG00020012906	CHD6	95	73.269
ENSCAFG00020002879	CHD9	91	54.762	ENSCAFG00020015856	CHD7	91	54.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002879	CHD9	100	98.901	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCAFG00020002879	CHD9	91	70.107	ENSAPOG00000023034	chd9	66	75.432	Acanthochromis_polyacanthus
ENSCAFG00020002879	CHD9	100	99.267	ENSAMEG00000016232	CHD9	100	98.623	Ailuropoda_melanoleuca
ENSCAFG00020002879	CHD9	92	70.486	ENSACIG00000004097	chd9	73	61.714	Amphilophus_citrinellus
ENSCAFG00020002879	CHD9	91	69.718	ENSAOCG00000005487	chd9	67	75.492	Amphiprion_ocellaris
ENSCAFG00020002879	CHD9	91	69.718	ENSAPEG00000009859	chd9	67	75.432	Amphiprion_percula
ENSCAFG00020002879	CHD9	91	71.886	ENSATEG00000002748	chd9	100	61.017	Anabas_testudineus
ENSCAFG00020002879	CHD9	98	91.941	ENSAPLG00000002826	CHD9	74	85.922	Anas_platyrhynchos
ENSCAFG00020002879	CHD9	98	88.645	ENSACAG00000016150	CHD9	98	81.135	Anolis_carolinensis
ENSCAFG00020002879	CHD9	100	97.802	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSCAFG00020002879	CHD9	92	68.836	ENSACLG00000016899	chd9	73	63.029	Astatotilapia_calliptera
ENSCAFG00020002879	CHD9	98	71.228	ENSAMXG00000005652	chd9	68	75.343	Astyanax_mexicanus
ENSCAFG00020002879	CHD9	100	99.267	ENSBTAG00000002287	CHD9	100	96.796	Bos_taurus
ENSCAFG00020002879	CHD9	100	98.168	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSCAFG00020002879	CHD9	100	100.000	ENSCAFG00000009699	CHD9	100	100.000	Canis_familiaris
ENSCAFG00020002879	CHD9	100	94.505	ENSCHIG00000021000	CHD9	100	94.039	Capra_hircus
ENSCAFG00020002879	CHD9	100	98.901	ENSTSYG00000007693	CHD9	100	98.901	Carlito_syrichta
ENSCAFG00020002879	CHD9	77	96.774	ENSCAPG00000011604	CHD9	81	79.429	Cavia_aperea
ENSCAFG00020002879	CHD9	100	98.168	ENSCPOG00000036544	CHD9	100	91.354	Cavia_porcellus
ENSCAFG00020002879	CHD9	100	97.436	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSCAFG00020002879	CHD9	100	98.168	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSCAFG00020002879	CHD9	98	99.634	ENSCLAG00000007137	CHD9	99	96.532	Chinchilla_lanigera
ENSCAFG00020002879	CHD9	100	98.168	ENSCSAG00000005311	CHD9	100	96.281	Chlorocebus_sabaeus
ENSCAFG00020002879	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSCAFG00020002879	CHD9	98	88.278	ENSCPBG00000012459	CHD9	99	91.980	Chrysemys_picta_bellii
ENSCAFG00020002879	CHD9	100	98.168	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSCAFG00020002879	CHD9	98	96.337	ENSCGRG00001016150	Chd9	99	91.875	Cricetulus_griseus_chok1gshd
ENSCAFG00020002879	CHD9	98	96.337	ENSCGRG00000012850	Chd9	99	95.838	Cricetulus_griseus_crigri
ENSCAFG00020002879	CHD9	91	69.550	ENSCSEG00000009209	chd9	67	72.543	Cynoglossus_semilaevis
ENSCAFG00020002879	CHD9	91	69.655	ENSCVAG00000016195	chd9	73	62.893	Cyprinodon_variegatus
ENSCAFG00020002879	CHD9	98	69.366	ENSDARG00000074498	chd9	68	74.103	Danio_rerio
ENSCAFG00020002879	CHD9	100	96.337	ENSDNOG00000006045	CHD9	100	96.219	Dasypus_novemcinctus
ENSCAFG00020002879	CHD9	100	94.872	ENSDORG00000008523	-	100	93.307	Dipodomys_ordii
ENSCAFG00020002879	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	97.895	Echinops_telfairi
ENSCAFG00020002879	CHD9	98	99.267	ENSEASG00005014832	CHD9	100	97.105	Equus_asinus_asinus
ENSCAFG00020002879	CHD9	100	99.634	ENSECAG00000011505	CHD9	100	97.038	Equus_caballus
ENSCAFG00020002879	CHD9	81	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSCAFG00020002879	CHD9	92	71.579	ENSELUG00000006031	chd9	97	67.799	Esox_lucius
ENSCAFG00020002879	CHD9	100	99.634	ENSFCAG00000022534	CHD9	100	99.634	Felis_catus
ENSCAFG00020002879	CHD9	98	91.575	ENSFALG00000013276	CHD9	99	88.255	Ficedula_albicollis
ENSCAFG00020002879	CHD9	100	99.267	ENSFDAG00000021037	CHD9	100	94.730	Fukomys_damarensis
ENSCAFG00020002879	CHD9	91	68.905	ENSFHEG00000006068	chd9	68	75.075	Fundulus_heteroclitus
ENSCAFG00020002879	CHD9	81	69.686	ENSGMOG00000006040	chd9	83	76.934	Gadus_morhua
ENSCAFG00020002879	CHD9	96	85.591	ENSGALG00000039178	CHD9	98	85.771	Gallus_gallus
ENSCAFG00020002879	CHD9	91	69.580	ENSGAFG00000010014	chd9	67	74.926	Gambusia_affinis
ENSCAFG00020002879	CHD9	91	67.832	ENSGACG00000016694	chd9	96	75.214	Gasterosteus_aculeatus
ENSCAFG00020002879	CHD9	98	84.411	ENSGAGG00000001048	-	98	88.645	Gopherus_agassizii
ENSCAFG00020002879	CHD9	100	98.535	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSCAFG00020002879	CHD9	91	70.526	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSCAFG00020002879	CHD9	100	99.267	ENSHGLG00000014938	CHD9	99	97.225	Heterocephalus_glaber_female
ENSCAFG00020002879	CHD9	100	93.264	ENSHGLG00100007620	-	100	94.872	Heterocephalus_glaber_male
ENSCAFG00020002879	CHD9	91	69.204	ENSHCOG00000000937	chd9	69	73.420	Hippocampus_comes
ENSCAFG00020002879	CHD9	92	72.263	ENSIPUG00000016448	chd9	97	73.358	Ictalurus_punctatus
ENSCAFG00020002879	CHD9	100	97.436	ENSSTOG00000022273	CHD9	99	97.341	Ictidomys_tridecemlineatus
ENSCAFG00020002879	CHD9	100	97.436	ENSJJAG00000015741	-	100	94.737	Jaculus_jaculus
ENSCAFG00020002879	CHD9	91	71.731	ENSKMAG00000016784	chd9	96	61.350	Kryptolebias_marmoratus
ENSCAFG00020002879	CHD9	91	69.718	ENSLBEG00000012077	chd9	98	68.080	Labrus_bergylta
ENSCAFG00020002879	CHD9	98	73.739	ENSLACG00000005557	CHD9	73	72.694	Latimeria_chalumnae
ENSCAFG00020002879	CHD9	98	75.714	ENSLOCG00000007225	chd9	68	80.371	Lepisosteus_oculatus
ENSCAFG00020002879	CHD9	100	97.070	ENSLAFG00000015374	CHD9	100	95.384	Loxodonta_africana
ENSCAFG00020002879	CHD9	100	98.168	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSCAFG00020002879	CHD9	100	98.168	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSCAFG00020002879	CHD9	100	97.802	ENSMNEG00000031494	CHD9	100	96.405	Macaca_nemestrina
ENSCAFG00020002879	CHD9	100	98.168	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSCAFG00020002879	CHD9	91	69.718	ENSMAMG00000003909	chd9	96	61.661	Mastacembelus_armatus
ENSCAFG00020002879	CHD9	91	70.526	ENSMZEG00005006581	chd9	67	75.716	Maylandia_zebra
ENSCAFG00020002879	CHD9	98	92.308	ENSMGAG00000004642	CHD9	72	81.300	Meleagris_gallopavo
ENSCAFG00020002879	CHD9	95	91.432	ENSMAUG00000000526	-	98	96.400	Mesocricetus_auratus
ENSCAFG00020002879	CHD9	100	98.168	ENSMICG00000016679	CHD9	100	98.168	Microcebus_murinus
ENSCAFG00020002879	CHD9	98	92.683	ENSMOCG00000010691	-	98	95.971	Microtus_ochrogaster
ENSCAFG00020002879	CHD9	91	70.671	ENSMMOG00000016406	chd9	74	63.229	Mola_mola
ENSCAFG00020002879	CHD9	98	85.664	ENSMODG00000013142	-	99	92.743	Monodelphis_domestica
ENSCAFG00020002879	CHD9	91	64.360	ENSMALG00000013306	chd9	73	62.194	Monopterus_albus
ENSCAFG00020002879	CHD9	98	95.238	MGP_CAROLIEiJ_G0031364	Chd9	99	90.701	Mus_caroli
ENSCAFG00020002879	CHD9	98	94.872	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSCAFG00020002879	CHD9	98	95.238	MGP_PahariEiJ_G0022964	Chd9	99	88.804	Mus_pahari
ENSCAFG00020002879	CHD9	98	94.505	MGP_SPRETEiJ_G0032483	Chd9	99	90.385	Mus_spretus
ENSCAFG00020002879	CHD9	100	99.634	ENSMPUG00000003285	CHD9	100	98.484	Mustela_putorius_furo
ENSCAFG00020002879	CHD9	100	99.267	ENSMLUG00000004456	CHD9	100	94.590	Myotis_lucifugus
ENSCAFG00020002879	CHD9	100	93.057	ENSNGAG00000015820	-	100	97.070	Nannospalax_galili
ENSCAFG00020002879	CHD9	91	71.277	ENSNBRG00000009423	chd9	67	75.581	Neolamprologus_brichardi
ENSCAFG00020002879	CHD9	90	96.550	ENSNLEG00000001026	CHD9	100	96.550	Nomascus_leucogenys
ENSCAFG00020002879	CHD9	74	98.496	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSCAFG00020002879	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSCAFG00020002879	CHD9	98	97.810	ENSODEG00000004466	CHD9	99	94.656	Octodon_degus
ENSCAFG00020002879	CHD9	92	70.175	ENSONIG00000002816	chd9	87	63.012	Oreochromis_niloticus
ENSCAFG00020002879	CHD9	100	93.818	ENSOANG00000013401	CHD9	100	87.337	Ornithorhynchus_anatinus
ENSCAFG00020002879	CHD9	100	97.802	ENSOCUG00000001016	CHD9	99	97.559	Oryctolagus_cuniculus
ENSCAFG00020002879	CHD9	91	70.732	ENSORLG00000013810	chd9	67	74.552	Oryzias_latipes
ENSCAFG00020002879	CHD9	91	73.646	ENSORLG00020020665	chd9	75	63.113	Oryzias_latipes_hni
ENSCAFG00020002879	CHD9	92	70.732	ENSORLG00015019126	chd9	81	62.261	Oryzias_latipes_hsok
ENSCAFG00020002879	CHD9	100	98.535	ENSOGAG00000002110	CHD9	100	95.112	Otolemur_garnettii
ENSCAFG00020002879	CHD9	100	98.188	ENSOARG00000017664	CHD9	100	96.559	Ovis_aries
ENSCAFG00020002879	CHD9	100	98.535	ENSPPAG00000039388	-	100	96.143	Pan_paniscus
ENSCAFG00020002879	CHD9	100	99.267	ENSPPRG00000004801	CHD9	100	99.267	Panthera_pardus
ENSCAFG00020002879	CHD9	100	97.037	ENSPTIG00000021854	CHD9	100	97.037	Panthera_tigris_altaica
ENSCAFG00020002879	CHD9	100	98.535	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSCAFG00020002879	CHD9	100	98.168	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSCAFG00020002879	CHD9	90	73.214	ENSPKIG00000021876	chd9	68	77.061	Paramormyrops_kingsleyae
ENSCAFG00020002879	CHD9	94	71.583	ENSPKIG00000025401	-	71	63.412	Paramormyrops_kingsleyae
ENSCAFG00020002879	CHD9	64	85.135	ENSPSIG00000008099	CHD9	99	85.135	Pelodiscus_sinensis
ENSCAFG00020002879	CHD9	91	63.164	ENSPMGG00000021802	chd9	98	72.143	Periophthalmus_magnuspinnatus
ENSCAFG00020002879	CHD9	98	91.622	ENSPEMG00000021464	-	98	97.070	Peromyscus_maniculatus_bairdii
ENSCAFG00020002879	CHD9	64	61.538	ENSPMAG00000006035	-	72	67.820	Petromyzon_marinus
ENSCAFG00020002879	CHD9	89	88.281	ENSPCIG00000017215	CHD9	97	90.420	Phascolarctos_cinereus
ENSCAFG00020002879	CHD9	91	69.231	ENSPFOG00000015839	chd9	94	66.462	Poecilia_formosa
ENSCAFG00020002879	CHD9	91	69.965	ENSPLAG00000011118	chd9	66	75.075	Poecilia_latipinna
ENSCAFG00020002879	CHD9	91	70.318	ENSPMEG00000015106	chd9	68	71.405	Poecilia_mexicana
ENSCAFG00020002879	CHD9	91	69.965	ENSPREG00000006473	chd9	98	68.383	Poecilia_reticulata
ENSCAFG00020002879	CHD9	100	98.168	ENSPPYG00000007348	CHD9	100	96.347	Pongo_abelii
ENSCAFG00020002879	CHD9	77	96.639	ENSPCAG00000007564	CHD9	86	96.639	Procavia_capensis
ENSCAFG00020002879	CHD9	100	99.267	ENSPCOG00000028433	CHD9	100	99.267	Propithecus_coquereli
ENSCAFG00020002879	CHD9	97	95.101	ENSPVAG00000015617	CHD9	98	95.202	Pteropus_vampyrus
ENSCAFG00020002879	CHD9	91	70.526	ENSPNYG00000010947	chd9	66	75.581	Pundamilia_nyererei
ENSCAFG00020002879	CHD9	93	71.636	ENSPNAG00000024141	chd9	68	75.583	Pygocentrus_nattereri
ENSCAFG00020002879	CHD9	88	93.785	ENSRNOG00000049302	Chd9	100	89.905	Rattus_norvegicus
ENSCAFG00020002879	CHD9	100	98.168	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSCAFG00020002879	CHD9	100	98.168	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSCAFG00020002879	CHD9	100	97.436	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSCAFG00020002879	CHD9	98	92.727	ENSSHAG00000002719	CHD9	100	88.583	Sarcophilus_harrisii
ENSCAFG00020002879	CHD9	92	72.500	ENSSFOG00015020209	chd9	99	70.139	Scleropages_formosus
ENSCAFG00020002879	CHD9	93	71.685	ENSSFOG00015001327	chd9	67	75.908	Scleropages_formosus
ENSCAFG00020002879	CHD9	91	68.531	ENSSMAG00000008953	chd9	99	62.722	Scophthalmus_maximus
ENSCAFG00020002879	CHD9	91	71.127	ENSSDUG00000006139	chd9	67	74.985	Seriola_dumerili
ENSCAFG00020002879	CHD9	91	71.986	ENSSLDG00000017818	chd9	66	75.045	Seriola_lalandi_dorsalis
ENSCAFG00020002879	CHD9	100	95.324	ENSSARG00000010632	CHD9	97	94.902	Sorex_araneus
ENSCAFG00020002879	CHD9	98	86.532	ENSSPUG00000017465	-	98	91.941	Sphenodon_punctatus
ENSCAFG00020002879	CHD9	91	68.662	ENSSPAG00000021649	chd9	67	74.970	Stegastes_partitus
ENSCAFG00020002879	CHD9	98	99.267	ENSSSCG00000033591	CHD9	100	95.084	Sus_scrofa
ENSCAFG00020002879	CHD9	90	85.660	ENSTGUG00000007476	CHD9	100	85.851	Taeniopygia_guttata
ENSCAFG00020002879	CHD9	97	72.857	ENSTRUG00000009125	chd9	73	62.875	Takifugu_rubripes
ENSCAFG00020002879	CHD9	75	68.310	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSCAFG00020002879	CHD9	66	97.748	ENSTBEG00000016052	-	81	97.748	Tupaia_belangeri
ENSCAFG00020002879	CHD9	90	96.550	ENSTTRG00000012674	CHD9	90	96.550	Tursiops_truncatus
ENSCAFG00020002879	CHD9	100	100.000	ENSUAMG00000022706	CHD9	100	100.000	Ursus_americanus
ENSCAFG00020002879	CHD9	90	96.295	ENSUMAG00000004043	CHD9	99	100.000	Ursus_maritimus
ENSCAFG00020002879	CHD9	100	98.535	ENSVPAG00000001374	CHD9	97	96.268	Vicugna_pacos
ENSCAFG00020002879	CHD9	100	100.000	ENSVVUG00000019435	CHD9	100	99.931	Vulpes_vulpes
ENSCAFG00020002879	CHD9	98	81.319	ENSXETG00000000349	chd9	96	77.007	Xenopus_tropicalis
ENSCAFG00020002879	CHD9	91	69.965	ENSXCOG00000012997	chd9	67	75.149	Xiphophorus_couchianus
ENSCAFG00020002879	CHD9	91	69.580	ENSXMAG00000016192	chd9	67	76.217	Xiphophorus_maculatus