EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020002900 (Gene tree)
Gene ID: 112668067
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 11456 bases
Position: chrQKWQ01002038.1:3565620-3577075
Accession: 112668067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003429	RRM_1	PF00076.22	5.5e-14	1	1
ENSCAFP00020003429	RRM_3	PF08777.11	1.8e-31	1	1
ENSCAFP00020003429	La	PF05383.17	7.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003982	SSB-201	1663	XM_025460103	ENSCAFP00020003429	406 (aa)	XP_025315888	UPI00004BF8A5

Gene Model

Click here to download ENSCAFG00020002900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002900	SSB	100	93.888	ENSG00000138385	SSB	100	97.500	Homo_sapiens
ENSCAFG00020002900	SSB	98	54.591	ENSAPOG00000003448	ssb	100	55.037	Acanthochromis_polyacanthus
ENSCAFG00020002900	SSB	100	94.524	ENSAMEG00000010507	SSB	100	94.524	Ailuropoda_melanoleuca
ENSCAFG00020002900	SSB	92	58.289	ENSACIG00000001738	ssb	97	58.133	Amphilophus_citrinellus
ENSCAFG00020002900	SSB	98	54.839	ENSAOCG00000020398	ssb	100	55.528	Amphiprion_ocellaris
ENSCAFG00020002900	SSB	98	55.087	ENSAPEG00000020395	ssb	100	55.774	Amphiprion_percula
ENSCAFG00020002900	SSB	99	56.265	ENSATEG00000016884	ssb	100	56.757	Anabas_testudineus
ENSCAFG00020002900	SSB	100	69.811	ENSAPLG00000006109	SSB	100	71.831	Anas_platyrhynchos
ENSCAFG00020002900	SSB	100	67.153	ENSACAG00000017008	SSB	99	67.153	Anolis_carolinensis
ENSCAFG00020002900	SSB	100	84.729	ENSANAG00000027195	-	100	84.729	Aotus_nancymaae
ENSCAFG00020002900	SSB	99	54.568	ENSACLG00000010798	ssb	100	54.321	Astatotilapia_calliptera
ENSCAFG00020002900	SSB	98	54.902	ENSAMXG00000012606	ssb	100	55.932	Astyanax_mexicanus
ENSCAFG00020002900	SSB	100	94.581	ENSBTAG00000008716	SSB	100	94.581	Bos_taurus
ENSCAFG00020002900	SSB	73	35.099	WBGene00016653	C44E4.4	85	33.041	Caenorhabditis_elegans
ENSCAFG00020002900	SSB	100	93.596	ENSCJAG00000045073	SSB	100	93.596	Callithrix_jacchus
ENSCAFG00020002900	SSB	100	100.000	ENSCAFG00000012418	SSB	100	100.000	Canis_familiaris
ENSCAFG00020002900	SSB	100	88.424	ENSCHIG00000022196	-	100	88.424	Capra_hircus
ENSCAFG00020002900	SSB	100	94.581	ENSCHIG00000022624	-	100	94.581	Capra_hircus
ENSCAFG00020002900	SSB	100	94.335	ENSTSYG00000000097	SSB	100	94.335	Carlito_syrichta
ENSCAFG00020002900	SSB	100	95.320	ENSCPOG00000003338	SSB	100	95.320	Cavia_porcellus
ENSCAFG00020002900	SSB	100	94.089	ENSCCAG00000035147	SSB	100	94.089	Cebus_capucinus
ENSCAFG00020002900	SSB	100	73.892	ENSCATG00000036701	SSB	100	73.892	Cercocebus_atys
ENSCAFG00020002900	SSB	100	70.197	ENSCATG00000042909	-	100	70.197	Cercocebus_atys
ENSCAFG00020002900	SSB	100	95.320	ENSCLAG00000015617	-	100	95.320	Chinchilla_lanigera
ENSCAFG00020002900	SSB	100	94.581	ENSCSAG00000015200	SSB	89	94.581	Chlorocebus_sabaeus
ENSCAFG00020002900	SSB	98	85.930	ENSCSAG00000018390	-	100	85.930	Chlorocebus_sabaeus
ENSCAFG00020002900	SSB	100	94.335	ENSCHOG00000007763	SSB	100	94.335	Choloepus_hoffmanni
ENSCAFG00020002900	SSB	100	78.537	ENSCPBG00000006519	SSB	100	79.268	Chrysemys_picta_bellii
ENSCAFG00020002900	SSB	100	80.049	ENSCANG00000033240	-	100	80.049	Colobus_angolensis_palliatus
ENSCAFG00020002900	SSB	100	94.828	ENSCANG00000027695	SSB	100	94.828	Colobus_angolensis_palliatus
ENSCAFG00020002900	SSB	98	74.185	ENSCANG00000028838	-	95	74.185	Colobus_angolensis_palliatus
ENSCAFG00020002900	SSB	100	79.319	ENSCGRG00001024831	Ssb	100	80.535	Cricetulus_griseus_chok1gshd
ENSCAFG00020002900	SSB	100	79.319	ENSCGRG00000005387	Ssb	100	80.535	Cricetulus_griseus_crigri
ENSCAFG00020002900	SSB	98	56.359	ENSCSEG00000011599	ssb	99	57.107	Cynoglossus_semilaevis
ENSCAFG00020002900	SSB	99	57.108	ENSCVAG00000021558	ssb	100	57.598	Cyprinodon_variegatus
ENSCAFG00020002900	SSB	98	56.436	ENSDARG00000029252	ssb	99	56.436	Danio_rerio
ENSCAFG00020002900	SSB	100	94.089	ENSDNOG00000013450	SSB	100	94.089	Dasypus_novemcinctus
ENSCAFG00020002900	SSB	100	84.223	ENSDORG00000005543	Ssb	100	84.223	Dipodomys_ordii
ENSCAFG00020002900	SSB	83	33.524	FBgn0011638	La	92	33.421	Drosophila_melanogaster
ENSCAFG00020002900	SSB	58	92.537	ENSETEG00000004614	-	61	92.537	Echinops_telfairi
ENSCAFG00020002900	SSB	96	47.583	ENSEBUG00000001237	ssb	96	47.837	Eptatretus_burgeri
ENSCAFG00020002900	SSB	100	96.305	ENSEASG00005022835	SSB	100	96.305	Equus_asinus_asinus
ENSCAFG00020002900	SSB	100	96.552	ENSECAG00000018495	SSB	100	96.552	Equus_caballus
ENSCAFG00020002900	SSB	75	75.490	ENSEEUG00000008077	SSB	78	75.490	Erinaceus_europaeus
ENSCAFG00020002900	SSB	98	58.853	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSCAFG00020002900	SSB	100	97.044	ENSFCAG00000011601	SSB	100	97.044	Felis_catus
ENSCAFG00020002900	SSB	100	75.490	ENSFALG00000000930	SSB	100	75.490	Ficedula_albicollis
ENSCAFG00020002900	SSB	100	95.074	ENSFDAG00000000598	SSB	100	95.074	Fukomys_damarensis
ENSCAFG00020002900	SSB	72	54.849	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSCAFG00020002900	SSB	97	54.926	ENSGMOG00000002664	ssb	99	55.665	Gadus_morhua
ENSCAFG00020002900	SSB	100	75.061	ENSGALG00000009677	SSB	100	75.061	Gallus_gallus
ENSCAFG00020002900	SSB	99	56.020	ENSGAFG00000002749	ssb	100	56.265	Gambusia_affinis
ENSCAFG00020002900	SSB	99	53.753	ENSGACG00000005107	ssb	100	54.106	Gasterosteus_aculeatus
ENSCAFG00020002900	SSB	100	77.805	ENSGAGG00000007807	SSB	100	78.537	Gopherus_agassizii
ENSCAFG00020002900	SSB	100	77.833	ENSGGOG00000024891	-	100	77.833	Gorilla_gorilla
ENSCAFG00020002900	SSB	63	90.265	ENSGGOG00000023471	-	100	90.265	Gorilla_gorilla
ENSCAFG00020002900	SSB	99	54.074	ENSHBUG00000006584	ssb	100	53.827	Haplochromis_burtoni
ENSCAFG00020002900	SSB	100	85.961	ENSHGLG00000005832	-	100	85.961	Heterocephalus_glaber_female
ENSCAFG00020002900	SSB	100	86.520	ENSHGLG00000004478	-	100	86.520	Heterocephalus_glaber_female
ENSCAFG00020002900	SSB	100	93.462	ENSHGLG00000017580	-	100	93.462	Heterocephalus_glaber_female
ENSCAFG00020002900	SSB	100	93.462	ENSHGLG00100003084	-	100	93.462	Heterocephalus_glaber_male
ENSCAFG00020002900	SSB	100	81.773	ENSHGLG00100008767	-	100	81.773	Heterocephalus_glaber_male
ENSCAFG00020002900	SSB	98	54.271	ENSHCOG00000019011	ssb	99	54.523	Hippocampus_comes
ENSCAFG00020002900	SSB	97	57.463	ENSIPUG00000003681	SSB	99	57.921	Ictalurus_punctatus
ENSCAFG00020002900	SSB	100	94.828	ENSSTOG00000008416	SSB	100	94.828	Ictidomys_tridecemlineatus
ENSCAFG00020002900	SSB	99	67.494	ENSJJAG00000016250	-	99	67.494	Jaculus_jaculus
ENSCAFG00020002900	SSB	100	79.245	ENSJJAG00000023158	-	100	79.245	Jaculus_jaculus
ENSCAFG00020002900	SSB	99	56.020	ENSKMAG00000017317	ssb	100	56.511	Kryptolebias_marmoratus
ENSCAFG00020002900	SSB	98	53.598	ENSLBEG00000017345	ssb	100	54.545	Labrus_bergylta
ENSCAFG00020002900	SSB	99	66.912	ENSLACG00000014056	SSB	99	69.193	Latimeria_chalumnae
ENSCAFG00020002900	SSB	98	66.085	ENSLOCG00000007933	ssb	99	66.584	Lepisosteus_oculatus
ENSCAFG00020002900	SSB	100	86.730	ENSLAFG00000000867	-	100	88.389	Loxodonta_africana
ENSCAFG00020002900	SSB	74	69.868	ENSLAFG00000026721	-	99	69.868	Loxodonta_africana
ENSCAFG00020002900	SSB	100	78.079	ENSLAFG00000028909	-	100	78.079	Loxodonta_africana
ENSCAFG00020002900	SSB	100	94.828	ENSMFAG00000039066	SSB	100	94.828	Macaca_fascicularis
ENSCAFG00020002900	SSB	88	80.952	ENSMFAG00000041478	-	100	80.952	Macaca_fascicularis
ENSCAFG00020002900	SSB	100	79.803	ENSMMUG00000011724	-	97	79.803	Macaca_mulatta
ENSCAFG00020002900	SSB	99	66.584	ENSMMUG00000039889	-	100	66.832	Macaca_mulatta
ENSCAFG00020002900	SSB	100	94.828	ENSMMUG00000023051	SSB	100	94.828	Macaca_mulatta
ENSCAFG00020002900	SSB	100	82.238	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSCAFG00020002900	SSB	88	80.952	ENSMNEG00000034698	-	100	80.952	Macaca_nemestrina
ENSCAFG00020002900	SSB	100	66.995	ENSMLEG00000042644	-	100	66.995	Mandrillus_leucophaeus
ENSCAFG00020002900	SSB	100	94.828	ENSMLEG00000035717	SSB	100	94.828	Mandrillus_leucophaeus
ENSCAFG00020002900	SSB	99	58.477	ENSMAMG00000004800	ssb	100	58.968	Mastacembelus_armatus
ENSCAFG00020002900	SSB	99	54.568	ENSMZEG00005005749	ssb	100	54.321	Maylandia_zebra
ENSCAFG00020002900	SSB	100	75.061	ENSMGAG00000010328	SSB	99	76.098	Meleagris_gallopavo
ENSCAFG00020002900	SSB	99	95.050	ENSMICG00000028252	-	99	95.050	Microcebus_murinus
ENSCAFG00020002900	SSB	99	85.644	ENSMICG00000033304	-	99	85.533	Microcebus_murinus
ENSCAFG00020002900	SSB	100	65.025	ENSMODG00000007027	-	100	65.025	Monodelphis_domestica
ENSCAFG00020002900	SSB	100	67.488	ENSMODG00000019271	-	100	67.734	Monodelphis_domestica
ENSCAFG00020002900	SSB	100	77.885	ENSMODG00000008227	-	100	78.846	Monodelphis_domestica
ENSCAFG00020002900	SSB	90	58.583	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSCAFG00020002900	SSB	100	77.488	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSCAFG00020002900	SSB	100	76.777	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSCAFG00020002900	SSB	100	76.777	MGP_PahariEiJ_G0025081	-	100	91.304	Mus_pahari
ENSCAFG00020002900	SSB	100	76.777	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSCAFG00020002900	SSB	100	98.522	ENSMPUG00000000785	SSB	100	98.522	Mustela_putorius_furo
ENSCAFG00020002900	SSB	100	89.786	ENSMLUG00000016316	SSB	100	89.786	Myotis_lucifugus
ENSCAFG00020002900	SSB	99	54.568	ENSNBRG00000012661	ssb	100	54.321	Neolamprologus_brichardi
ENSCAFG00020002900	SSB	100	68.227	ENSNLEG00000028754	-	100	68.227	Nomascus_leucogenys
ENSCAFG00020002900	SSB	100	94.581	ENSNLEG00000004958	SSB	100	94.581	Nomascus_leucogenys
ENSCAFG00020002900	SSB	61	87.097	ENSMEUG00000001650	-	100	87.097	Notamacropus_eugenii
ENSCAFG00020002900	SSB	72	71.478	ENSOPRG00000008475	-	100	72.509	Ochotona_princeps
ENSCAFG00020002900	SSB	93	88.654	ENSODEG00000004202	-	100	88.654	Octodon_degus
ENSCAFG00020002900	SSB	99	54.568	ENSONIG00000008776	ssb	100	54.321	Oreochromis_niloticus
ENSCAFG00020002900	SSB	100	83.498	ENSOANG00000008543	SSB	100	83.498	Ornithorhynchus_anatinus
ENSCAFG00020002900	SSB	100	93.842	ENSOCUG00000010396	SSB	100	93.842	Oryctolagus_cuniculus
ENSCAFG00020002900	SSB	99	57.494	ENSORLG00000017208	ssb	100	57.740	Oryzias_latipes
ENSCAFG00020002900	SSB	99	57.248	ENSORLG00020022574	ssb	100	57.494	Oryzias_latipes_hni
ENSCAFG00020002900	SSB	99	57.248	ENSORLG00015016592	ssb	100	57.494	Oryzias_latipes_hsok
ENSCAFG00020002900	SSB	98	56.965	ENSOMEG00000003193	ssb	100	57.882	Oryzias_melastigma
ENSCAFG00020002900	SSB	100	90.307	ENSOGAG00000029768	SSB	100	90.307	Otolemur_garnettii
ENSCAFG00020002900	SSB	100	94.089	ENSOARG00000002906	SSB	100	94.089	Ovis_aries
ENSCAFG00020002900	SSB	97	73.418	ENSPPAG00000006189	-	96	77.212	Pan_paniscus
ENSCAFG00020002900	SSB	100	77.094	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSCAFG00020002900	SSB	100	93.888	ENSPPAG00000042673	SSB	100	93.888	Pan_paniscus
ENSCAFG00020002900	SSB	100	97.044	ENSPPRG00000006599	SSB	100	97.044	Panthera_pardus
ENSCAFG00020002900	SSB	100	97.044	ENSPTIG00000011021	SSB	97	97.044	Panthera_tigris_altaica
ENSCAFG00020002900	SSB	100	93.888	ENSPTRG00000012620	SSB	100	93.888	Pan_troglodytes
ENSCAFG00020002900	SSB	100	73.892	ENSPTRG00000042880	-	100	73.892	Pan_troglodytes
ENSCAFG00020002900	SSB	100	67.488	ENSPANG00000034126	-	100	67.980	Papio_anubis
ENSCAFG00020002900	SSB	98	65.664	ENSPANG00000031877	-	95	65.664	Papio_anubis
ENSCAFG00020002900	SSB	100	94.828	ENSPANG00000007440	SSB	100	94.828	Papio_anubis
ENSCAFG00020002900	SSB	98	62.438	ENSPKIG00000019325	ssb	99	63.054	Paramormyrops_kingsleyae
ENSCAFG00020002900	SSB	100	75.366	ENSPSIG00000002265	SSB	93	76.098	Pelodiscus_sinensis
ENSCAFG00020002900	SSB	84	54.286	ENSPMGG00000020075	ssb	92	54.728	Periophthalmus_magnuspinnatus
ENSCAFG00020002900	SSB	81	50.606	ENSPMAG00000002982	ssb	89	49.091	Petromyzon_marinus
ENSCAFG00020002900	SSB	100	82.555	ENSPCIG00000028591	-	100	83.292	Phascolarctos_cinereus
ENSCAFG00020002900	SSB	99	57.248	ENSPFOG00000009650	ssb	100	57.494	Poecilia_formosa
ENSCAFG00020002900	SSB	99	57.002	ENSPLAG00000020498	ssb	100	57.248	Poecilia_latipinna
ENSCAFG00020002900	SSB	99	56.757	ENSPMEG00000001051	ssb	100	57.248	Poecilia_mexicana
ENSCAFG00020002900	SSB	94	57.292	ENSPREG00000003708	ssb	99	57.552	Poecilia_reticulata
ENSCAFG00020002900	SSB	100	94.581	ENSPPYG00000012919	SSB	100	94.581	Pongo_abelii
ENSCAFG00020002900	SSB	95	88.802	ENSPCAG00000010276	SSB	100	88.802	Procavia_capensis
ENSCAFG00020002900	SSB	100	91.379	ENSPCOG00000015741	-	100	91.379	Propithecus_coquereli
ENSCAFG00020002900	SSB	100	83.744	ENSPCOG00000023189	-	100	83.744	Propithecus_coquereli
ENSCAFG00020002900	SSB	87	95.480	ENSPVAG00000006615	SSB	100	95.480	Pteropus_vampyrus
ENSCAFG00020002900	SSB	99	54.568	ENSPNYG00000006444	ssb	100	54.321	Pundamilia_nyererei
ENSCAFG00020002900	SSB	98	57.143	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSCAFG00020002900	SSB	100	77.725	ENSRNOG00000007998	Ssb	100	77.725	Rattus_norvegicus
ENSCAFG00020002900	SSB	100	78.240	ENSRNOG00000011606	AABR07061825.1	100	78.240	Rattus_norvegicus
ENSCAFG00020002900	SSB	94	78.421	ENSRBIG00000041232	-	98	78.421	Rhinopithecus_bieti
ENSCAFG00020002900	SSB	100	68.059	ENSRBIG00000029918	-	100	68.305	Rhinopithecus_bieti
ENSCAFG00020002900	SSB	89	86.501	ENSRBIG00000041608	-	98	86.501	Rhinopithecus_bieti
ENSCAFG00020002900	SSB	100	78.832	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSCAFG00020002900	SSB	98	79.597	ENSRROG00000031684	-	100	79.597	Rhinopithecus_roxellana
ENSCAFG00020002900	SSB	100	77.887	ENSRROG00000007149	-	100	77.887	Rhinopithecus_roxellana
ENSCAFG00020002900	SSB	98	85.037	ENSRROG00000034102	-	98	84.962	Rhinopithecus_roxellana
ENSCAFG00020002900	SSB	100	94.828	ENSRROG00000040346	SSB	100	94.828	Rhinopithecus_roxellana
ENSCAFG00020002900	SSB	100	94.581	ENSSBOG00000027204	SSB	100	94.581	Saimiri_boliviensis_boliviensis
ENSCAFG00020002900	SSB	100	81.572	ENSSHAG00000018062	SSB	100	83.292	Sarcophilus_harrisii
ENSCAFG00020002900	SSB	99	63.570	ENSSFOG00015000550	ssb	100	64.059	Scleropages_formosus
ENSCAFG00020002900	SSB	98	53.500	ENSSMAG00000013885	ssb	99	57.219	Scophthalmus_maximus
ENSCAFG00020002900	SSB	99	56.511	ENSSDUG00000020117	ssb	100	56.757	Seriola_dumerili
ENSCAFG00020002900	SSB	99	54.455	ENSSLDG00000002525	ssb	100	54.703	Seriola_lalandi_dorsalis
ENSCAFG00020002900	SSB	95	84.896	ENSSARG00000007747	SSB	100	84.896	Sorex_araneus
ENSCAFG00020002900	SSB	100	76.961	ENSSPUG00000012112	SSB	100	76.961	Sphenodon_punctatus
ENSCAFG00020002900	SSB	99	55.037	ENSSPAG00000005696	ssb	100	55.528	Stegastes_partitus
ENSCAFG00020002900	SSB	98	77.889	ENSSSCG00000015938	SSB	98	78.446	Sus_scrofa
ENSCAFG00020002900	SSB	100	74.878	ENSTGUG00000007942	SSB	100	75.122	Taeniopygia_guttata
ENSCAFG00020002900	SSB	99	56.790	ENSTRUG00000017839	ssb	100	57.389	Takifugu_rubripes
ENSCAFG00020002900	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.783	Tetraodon_nigroviridis
ENSCAFG00020002900	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSCAFG00020002900	SSB	100	94.828	ENSTTRG00000002152	SSB	100	94.828	Tursiops_truncatus
ENSCAFG00020002900	SSB	93	98.674	ENSUAMG00000027833	SSB	99	98.674	Ursus_americanus
ENSCAFG00020002900	SSB	100	98.276	ENSUMAG00000013907	SSB	100	98.276	Ursus_maritimus
ENSCAFG00020002900	SSB	100	94.089	ENSVPAG00000007183	SSB	100	94.089	Vicugna_pacos
ENSCAFG00020002900	SSB	100	100.000	ENSVVUG00000016573	SSB	78	100.000	Vulpes_vulpes
ENSCAFG00020002900	SSB	100	58.178	ENSXETG00000025402	ssb	100	59.907	Xenopus_tropicalis
ENSCAFG00020002900	SSB	94	55.352	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSCAFG00020002900	SSB	99	56.020	ENSXMAG00000004888	ssb	100	56.265	Xiphophorus_maculatus