EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020002919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 47264 bases
Position: chrQKWQ01001821.1:18728295-18775558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003465	TUDOR	PF00567.24	1.9e-49	1	3
ENSCAFP00020003465	TUDOR	PF00567.24	1.9e-49	2	3
ENSCAFP00020003465	TUDOR	PF00567.24	1.9e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020004023	-	1824	-	ENSCAFP00020003465	607 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002919	-	100	83.254	ENSG00000132972	RNF17	100	83.254	Homo_sapiens
ENSCAFG00020002919	-	98	34.933	ENSAOCG00000018283	rnf17	50	40.670	Amphiprion_ocellaris
ENSCAFG00020002919	-	86	34.912	ENSATEG00000002067	rnf17	54	39.353	Anabas_testudineus
ENSCAFG00020002919	-	95	73.524	ENSANAG00000029969	RNF17	95	72.605	Aotus_nancymaae
ENSCAFG00020002919	-	100	87.342	ENSBTAG00000000278	RNF17	100	87.342	Bos_taurus
ENSCAFG00020002919	-	100	82.464	ENSCJAG00000018937	RNF17	100	82.622	Callithrix_jacchus
ENSCAFG00020002919	-	95	100.000	ENSCAFG00000007418	RNF17	52	100.000	Canis_familiaris
ENSCAFG00020002919	-	100	86.709	ENSCHIG00000026716	RNF17	100	86.709	Capra_hircus
ENSCAFG00020002919	-	100	85.564	ENSTSYG00000000365	RNF17	99	79.213	Carlito_syrichta
ENSCAFG00020002919	-	100	61.429	ENSCAPG00000012908	RNF17	62	61.022	Cavia_aperea
ENSCAFG00020002919	-	100	85.752	ENSCCAG00000026725	RNF17	99	82.938	Cebus_capucinus
ENSCAFG00020002919	-	100	84.936	ENSCATG00000040352	RNF17	100	83.728	Cercocebus_atys
ENSCAFG00020002919	-	100	67.220	ENSCPBG00000020920	RNF17	61	67.220	Chrysemys_picta_bellii
ENSCAFG00020002919	-	99	84.751	ENSCANG00000032927	RNF17	99	83.544	Colobus_angolensis_palliatus
ENSCAFG00020002919	-	98	34.094	ENSDARG00000056387	rnf17	54	34.091	Danio_rerio
ENSCAFG00020002919	-	100	89.560	ENSEASG00005001421	-	100	89.560	Equus_asinus_asinus
ENSCAFG00020002919	-	100	98.340	ENSFCAG00000004914	RNF17	100	91.614	Felis_catus
ENSCAFG00020002919	-	100	48.554	ENSFALG00000008766	RNF17	51	47.945	Ficedula_albicollis
ENSCAFG00020002919	-	99	33.728	ENSFHEG00000014822	rnf17	50	37.441	Fundulus_heteroclitus
ENSCAFG00020002919	-	70	37.681	ENSGMOG00000015560	-	65	37.681	Gadus_morhua
ENSCAFG00020002919	-	100	50.000	ENSGALG00000045414	-	100	50.482	Gallus_gallus
ENSCAFG00020002919	-	83	37.383	ENSGACG00000001340	-	75	37.383	Gasterosteus_aculeatus
ENSCAFG00020002919	-	100	83.728	ENSGGOG00000014491	RNF17	100	83.728	Gorilla_gorilla
ENSCAFG00020002919	-	100	79.305	ENSSTOG00000011255	-	100	79.305	Ictidomys_tridecemlineatus
ENSCAFG00020002919	-	99	34.273	ENSKMAG00000013403	rnf17	55	34.024	Kryptolebias_marmoratus
ENSCAFG00020002919	-	100	84.936	ENSMFAG00000032388	RNF17	100	83.728	Macaca_fascicularis
ENSCAFG00020002919	-	100	83.728	ENSMMUG00000014610	RNF17	100	83.728	Macaca_mulatta
ENSCAFG00020002919	-	100	84.776	ENSMNEG00000011234	RNF17	100	84.776	Macaca_nemestrina
ENSCAFG00020002919	-	100	90.638	ENSMICG00000010364	RNF17	100	86.392	Microcebus_murinus
ENSCAFG00020002919	-	100	81.328	ENSMOCG00000011818	-	71	81.328	Microtus_ochrogaster
ENSCAFG00020002919	-	98	34.443	ENSMMOG00000019514	rnf17	62	34.443	Mola_mola
ENSCAFG00020002919	-	86	39.706	ENSMALG00000016943	rnf17	54	39.706	Monopterus_albus
ENSCAFG00020002919	-	100	83.817	MGP_CAROLIEiJ_G0019337	Rnf17	51	83.817	Mus_caroli
ENSCAFG00020002919	-	100	82.988	ENSMUSG00000000365	Rnf17	51	82.988	Mus_musculus
ENSCAFG00020002919	-	100	73.739	MGP_PahariEiJ_G0030355	Rnf17	54	73.591	Mus_pahari
ENSCAFG00020002919	-	100	82.988	MGP_SPRETEiJ_G0020228	Rnf17	51	82.988	Mus_spretus
ENSCAFG00020002919	-	99	35.156	ENSNBRG00000012006	rnf17	69	35.000	Neolamprologus_brichardi
ENSCAFG00020002919	-	100	82.780	ENSNLEG00000013780	RNF17	100	82.780	Nomascus_leucogenys
ENSCAFG00020002919	-	100	77.221	ENSODEG00000005443	-	100	76.737	Octodon_degus
ENSCAFG00020002919	-	99	39.706	ENSONIG00000015746	rnf17	59	41.627	Oreochromis_niloticus
ENSCAFG00020002919	-	98	35.241	ENSORLG00000012818	rnf17	67	34.894	Oryzias_latipes
ENSCAFG00020002919	-	98	35.053	ENSORLG00020009879	-	56	40.000	Oryzias_latipes_hni
ENSCAFG00020002919	-	98	34.901	ENSORLG00015013027	-	56	40.000	Oryzias_latipes_hsok
ENSCAFG00020002919	-	89	34.234	ENSOMEG00000009891	rnf17	67	33.513	Oryzias_melastigma
ENSCAFG00020002919	-	100	83.254	ENSPPAG00000028779	RNF17	100	83.254	Pan_paniscus
ENSCAFG00020002919	-	100	97.925	ENSPPRG00000009230	RNF17	100	91.772	Panthera_pardus
ENSCAFG00020002919	-	100	97.925	ENSPTIG00000001738	RNF17	100	91.930	Panthera_tigris_altaica
ENSCAFG00020002919	-	100	83.096	ENSPTRG00000005713	RNF17	100	83.096	Pan_troglodytes
ENSCAFG00020002919	-	100	83.728	ENSPANG00000007640	RNF17	100	83.728	Papio_anubis
ENSCAFG00020002919	-	100	67.797	ENSPSIG00000011245	RNF17	69	62.162	Pelodiscus_sinensis
ENSCAFG00020002919	-	100	85.892	ENSPEMG00000008693	Rnf17	51	85.892	Peromyscus_maniculatus_bairdii
ENSCAFG00020002919	-	98	34.551	ENSPFOG00000007124	rnf17	50	39.336	Poecilia_formosa
ENSCAFG00020002919	-	98	34.604	ENSPLAG00000006198	rnf17	50	39.336	Poecilia_latipinna
ENSCAFG00020002919	-	98	34.940	ENSPMEG00000022432	rnf17	50	39.810	Poecilia_mexicana
ENSCAFG00020002919	-	100	61.129	ENSPCOG00000020211	RNF17	100	61.129	Propithecus_coquereli
ENSCAFG00020002919	-	99	34.394	ENSPNAG00000027505	rnf17	63	33.891	Pygocentrus_nattereri
ENSCAFG00020002919	-	100	83.412	ENSRROG00000022801	RNF17	100	83.412	Rhinopithecus_roxellana
ENSCAFG00020002919	-	100	86.544	ENSSBOG00000021661	RNF17	99	83.728	Saimiri_boliviensis_boliviensis
ENSCAFG00020002919	-	99	37.086	ENSSFOG00015023037	rnf17	56	36.842	Scleropages_formosus
ENSCAFG00020002919	-	82	32.404	ENSSMAG00000007429	rnf17	53	31.359	Scophthalmus_maximus
ENSCAFG00020002919	-	86	33.105	ENSSDUG00000013530	rnf17	50	36.745	Seriola_dumerili
ENSCAFG00020002919	-	83	32.847	ENSSPAG00000001925	rnf17	54	32.423	Stegastes_partitus
ENSCAFG00020002919	-	100	86.307	ENSSSCG00000009572	RNF17	50	86.307	Sus_scrofa
ENSCAFG00020002919	-	63	50.597	ENSTGUG00000011272	-	100	50.597	Taeniopygia_guttata
ENSCAFG00020002919	-	98	34.930	ENSTRUG00000015498	rnf17	52	41.063	Takifugu_rubripes
ENSCAFG00020002919	-	98	34.299	ENSTNIG00000015681	rnf17	66	38.567	Tetraodon_nigroviridis
ENSCAFG00020002919	-	100	96.411	ENSUMAG00000013953	-	100	96.411	Ursus_maritimus
ENSCAFG00020002919	-	100	90.373	ENSVVUG00000006226	RNF17	50	87.034	Vulpes_vulpes
ENSCAFG00020002919	-	100	44.704	ENSXETG00000034020	RNF17	100	44.704	Xenopus_tropicalis
ENSCAFG00020002919	-	86	33.750	ENSXCOG00000018295	rnf17	54	33.213	Xiphophorus_couchianus