EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020003142 (Gene tree)
Gene ID: 112674473
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 648 bases
Position: chrQKWQ01000709.1:1957654-1958301
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003747	RNA_helicase	PF00910.22	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020004344	-	648	-	ENSCAFP00020003747	215 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020003142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020003142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020003142	-	73	32.919	ENSCAFG00020026971	RAB1A	79	32.919
ENSCAFG00020003142	-	70	32.468	ENSCAFG00020008478	RAB11A	71	32.468
ENSCAFG00020003142	-	75	31.361	ENSCAFG00020004847	RAB7A	82	31.361
ENSCAFG00020003142	-	70	33.987	ENSCAFG00020018913	RAB35	76	33.987
ENSCAFG00020003142	-	79	32.609	ENSCAFG00020015406	-	92	32.609
ENSCAFG00020003142	-	77	32.558	ENSCAFG00020027287	RAB5A	79	32.558
ENSCAFG00020003142	-	56	30.894	ENSCAFG00020006867	RAB15	53	30.894
ENSCAFG00020003142	-	74	35.583	ENSCAFG00020017865	RAB30	80	35.583
ENSCAFG00020003142	-	76	32.749	ENSCAFG00020026094	RAB5B	80	32.749
ENSCAFG00020003142	-	76	32.934	ENSCAFG00020003253	RAB18	81	32.934
ENSCAFG00020003142	-	69	34.000	ENSCAFG00020006938	-	67	34.000
ENSCAFG00020003142	-	77	30.409	ENSCAFG00020002206	RAB6A	81	30.409
ENSCAFG00020003142	-	72	31.013	ENSCAFG00020021797	-	72	31.013
ENSCAFG00020003142	-	70	32.468	ENSCAFG00020006179	RAB25	72	32.468
ENSCAFG00020003142	-	70	33.117	ENSCAFG00020022184	RAB11B	71	33.117
ENSCAFG00020003142	-	74	32.934	ENSCAFG00020009287	RAB14	76	32.934
ENSCAFG00020003142	-	78	33.140	ENSCAFG00020013537	RAB5C	80	33.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020003142	-	100	93.056	ENSG00000132341	RAN	100	95.312	Homo_sapiens
ENSCAFG00020003142	-	100	85.648	ENSBTAG00000024233	-	100	85.648	Bos_taurus
ENSCAFG00020003142	-	100	84.186	ENSCHIG00000025632	-	100	84.186	Capra_hircus
ENSCAFG00020003142	-	70	88.742	ENSCSAG00000001906	-	99	88.742	Chlorocebus_sabaeus
ENSCAFG00020003142	-	69	84.667	ENSCING00000003944	-	98	81.013	Ciona_intestinalis
ENSCAFG00020003142	-	100	92.130	ENSCANG00000004264	-	100	92.130	Colobus_angolensis_palliatus
ENSCAFG00020003142	-	100	89.815	ENSCGRG00001009212	-	100	89.815	Cricetulus_griseus_chok1gshd
ENSCAFG00020003142	-	99	79.907	ENSCGRG00000007401	-	98	79.907	Cricetulus_griseus_crigri
ENSCAFG00020003142	-	100	89.815	ENSCGRG00000019639	Rasl2-9	100	89.815	Cricetulus_griseus_crigri
ENSCAFG00020003142	-	100	85.648	ENSDNOG00000031679	-	99	85.648	Dasypus_novemcinctus
ENSCAFG00020003142	-	51	81.818	ENSETEG00000010467	-	100	81.818	Echinops_telfairi
ENSCAFG00020003142	-	95	86.408	ENSHCOG00000009757	ran	95	86.408	Hippocampus_comes
ENSCAFG00020003142	-	66	88.732	ENSLACG00000018793	RAN	97	88.732	Latimeria_chalumnae
ENSCAFG00020003142	-	100	90.278	ENSMAUG00000015974	-	100	90.278	Mesocricetus_auratus
ENSCAFG00020003142	-	100	88.546	ENSMICG00000000653	-	100	88.546	Microcebus_murinus
ENSCAFG00020003142	-	100	87.500	ENSMUSG00000083649	Rasl2-9	100	87.500	Mus_musculus
ENSCAFG00020003142	-	100	87.037	MGP_SPRETEiJ_G0030206	Rasl2-9	100	87.037	Mus_spretus
ENSCAFG00020003142	-	82	89.266	MGP_SPRETEiJ_G0028777	-	96	89.266	Mus_spretus
ENSCAFG00020003142	-	100	75.463	ENSNGAG00000016204	-	100	75.463	Nannospalax_galili
ENSCAFG00020003142	-	94	84.236	ENSPMGG00000008616	ran	100	84.236	Periophthalmus_magnuspinnatus
ENSCAFG00020003142	-	91	90.863	ENSPEMG00000010658	-	92	90.863	Peromyscus_maniculatus_bairdii
ENSCAFG00020003142	-	100	74.194	ENSRBIG00000037389	-	100	74.194	Rhinopithecus_bieti
ENSCAFG00020003142	-	89	91.710	ENSRROG00000044174	-	97	91.710	Rhinopithecus_roxellana
ENSCAFG00020003142	-	99	86.449	ENSTRUG00000013749	ran	99	86.449	Takifugu_rubripes
ENSCAFG00020003142	-	99	85.514	ENSTNIG00000013137	ran	99	85.514	Tetraodon_nigroviridis