EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020003253 (Gene tree)
Gene ID: 112674603
Gene Symbol: RAB18
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 38160 bases
Position: chrQKWQ01002109.1:118085-156244
Accession: 112674603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003928	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020004554	RAB18-201	621	-	ENSCAFP00020003928	206 (aa)	XP_025326752	UPI00005A006C
ENSCAFT00020004557	RAB18-202	549	-	ENSCAFP00020003931	182 (aa)	-	UPI00034487F6
ENSCAFT00020004559	RAB18-203	486	-	ENSCAFP00020003932	161 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020003253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020003253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020003253	RAB18	82	47.929	ENSCAFG00020017865	RAB30	83	47.929
ENSCAFG00020003253	RAB18	92	45.833	ENSCAFG00020009287	RAB14	76	49.390
ENSCAFG00020003253	RAB18	84	48.851	ENSCAFG00020018913	RAB35	95	47.150
ENSCAFG00020003253	RAB18	72	38.926	ENSCAFG00020006938	-	65	38.926
ENSCAFG00020003253	RAB18	85	42.938	ENSCAFG00020026094	RAB5B	80	42.222
ENSCAFG00020003253	RAB18	79	34.731	ENSCAFG00020025277	DNAJC27	61	34.731
ENSCAFG00020003253	RAB18	92	40.933	ENSCAFG00020013537	RAB5C	85	41.622
ENSCAFG00020003253	RAB18	70	34.899	ENSCAFG00020005505	RHEB	78	34.899
ENSCAFG00020003253	RAB18	79	39.521	ENSCAFG00020004847	RAB7A	81	39.521
ENSCAFG00020003253	RAB18	56	30.252	ENSCAFG00020021117	ARL14	59	30.252
ENSCAFG00020003253	RAB18	67	47.101	ENSCAFG00020006867	RAB15	56	48.507
ENSCAFG00020003253	RAB18	91	48.958	ENSCAFG00020021797	-	81	50.276
ENSCAFG00020003253	RAB18	82	35.882	ENSCAFG00020008087	MRAS	81	35.882
ENSCAFG00020003253	RAB18	94	38.119	ENSCAFG00020027569	RAB6B	84	39.106
ENSCAFG00020003253	RAB18	83	39.884	ENSCAFG00020008673	RAB39B	81	39.884
ENSCAFG00020003253	RAB18	92	31.053	ENSCAFG00020012793	KRAS	87	33.537
ENSCAFG00020003253	RAB18	93	36.923	ENSCAFG00020002812	RAB9A	84	38.690
ENSCAFG00020003253	RAB18	72	34.641	ENSCAFG00020007046	RERG	74	34.641
ENSCAFG00020003253	RAB18	99	38.756	ENSCAFG00020006179	RAB25	79	43.529
ENSCAFG00020003253	RAB18	90	34.536	ENSCAFG00020015900	RAB23	81	34.536
ENSCAFG00020003253	RAB18	94	39.487	ENSCAFG00020022020	RAB22A	85	42.771
ENSCAFG00020003253	RAB18	81	32.530	ENSCAFG00020007059	HRAS	89	30.921
ENSCAFG00020003253	RAB18	93	45.361	ENSCAFG00020026971	RAB1A	88	46.703
ENSCAFG00020003253	RAB18	94	37.129	ENSCAFG00020002206	RAB6A	84	37.989
ENSCAFG00020003253	RAB18	79	49.697	ENSCAFG00020023721	RAB12	56	49.697
ENSCAFG00020003253	RAB18	78	47.531	ENSCAFG00020008478	RAB11A	75	47.531
ENSCAFG00020003253	RAB18	78	47.531	ENSCAFG00020022184	RAB11B	74	47.531
ENSCAFG00020003253	RAB18	81	32.934	ENSCAFG00020003142	-	76	32.934
ENSCAFG00020003253	RAB18	93	45.876	ENSCAFG00020015406	-	80	50.000
ENSCAFG00020003253	RAB18	93	41.117	ENSCAFG00020027287	RAB5A	85	43.243
ENSCAFG00020003253	RAB18	70	46.259	ENSCAFG00020001403	RAB33A	62	46.259
ENSCAFG00020003253	RAB18	87	39.130	ENSCAFG00020020861	RAB33B	80	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020003253	RAB18	100	98.544	ENSG00000099246	RAB18	100	98.544	Homo_sapiens
ENSCAFG00020003253	RAB18	99	84.878	ENSAPOG00000019881	rab18b	99	84.390	Acanthochromis_polyacanthus
ENSCAFG00020003253	RAB18	100	87.288	ENSAMEG00000015990	RAB18	100	87.288	Ailuropoda_melanoleuca
ENSCAFG00020003253	RAB18	99	86.341	ENSACIG00000008102	rab18b	99	86.341	Amphilophus_citrinellus
ENSCAFG00020003253	RAB18	99	84.390	ENSAOCG00000013479	rab18b	99	84.390	Amphiprion_ocellaris
ENSCAFG00020003253	RAB18	99	83.902	ENSAPEG00000022923	rab18b	99	83.902	Amphiprion_percula
ENSCAFG00020003253	RAB18	99	83.415	ENSATEG00000002952	rab18b	99	83.415	Anabas_testudineus
ENSCAFG00020003253	RAB18	100	98.544	ENSANAG00000035856	RAB18	100	98.544	Aotus_nancymaae
ENSCAFG00020003253	RAB18	99	85.366	ENSACLG00000015289	rab18b	99	85.366	Astatotilapia_calliptera
ENSCAFG00020003253	RAB18	100	86.893	ENSAMXG00000042073	rab18b	100	86.893	Astyanax_mexicanus
ENSCAFG00020003253	RAB18	100	99.029	ENSBTAG00000009871	RAB18	88	99.029	Bos_taurus
ENSCAFG00020003253	RAB18	100	96.602	ENSBTAG00000050873	-	100	96.602	Bos_taurus
ENSCAFG00020003253	RAB18	100	98.544	ENSCJAG00000045749	RAB18	100	98.544	Callithrix_jacchus
ENSCAFG00020003253	RAB18	100	99.029	ENSCHIG00000008749	RAB18	100	99.029	Capra_hircus
ENSCAFG00020003253	RAB18	100	98.058	ENSTSYG00000013092	RAB18	100	98.058	Carlito_syrichta
ENSCAFG00020003253	RAB18	100	97.573	ENSCPOG00000032827	RAB18	100	97.573	Cavia_porcellus
ENSCAFG00020003253	RAB18	100	98.544	ENSCCAG00000006762	RAB18	100	98.544	Cebus_capucinus
ENSCAFG00020003253	RAB18	100	98.544	ENSCATG00000009672	RAB18	100	98.544	Cercocebus_atys
ENSCAFG00020003253	RAB18	100	98.544	ENSCSAG00000011749	RAB18	100	98.544	Chlorocebus_sabaeus
ENSCAFG00020003253	RAB18	100	98.544	ENSCANG00000035397	RAB18	100	98.544	Colobus_angolensis_palliatus
ENSCAFG00020003253	RAB18	100	98.058	ENSCGRG00001017519	Rab18	100	98.058	Cricetulus_griseus_chok1gshd
ENSCAFG00020003253	RAB18	100	98.058	ENSCGRG00000017201	Rab18	100	98.058	Cricetulus_griseus_crigri
ENSCAFG00020003253	RAB18	95	84.615	ENSCSEG00000016803	rab18b	98	85.417	Cynoglossus_semilaevis
ENSCAFG00020003253	RAB18	100	87.379	ENSDARG00000098344	rab18b	100	87.379	Danio_rerio
ENSCAFG00020003253	RAB18	100	98.544	ENSDNOG00000047713	RAB18	100	98.544	Dasypus_novemcinctus
ENSCAFG00020003253	RAB18	62	88.372	ENSDNOG00000038845	-	85	88.372	Dasypus_novemcinctus
ENSCAFG00020003253	RAB18	100	97.573	ENSDORG00000028596	-	100	97.573	Dipodomys_ordii
ENSCAFG00020003253	RAB18	84	91.379	ENSDORG00000029360	-	83	91.379	Dipodomys_ordii
ENSCAFG00020003253	RAB18	100	98.544	ENSEASG00005007164	RAB18	100	98.544	Equus_asinus_asinus
ENSCAFG00020003253	RAB18	100	98.544	ENSECAG00000017521	RAB18	88	98.544	Equus_caballus
ENSCAFG00020003253	RAB18	99	86.408	ENSELUG00000016450	rab18b	99	86.408	Esox_lucius
ENSCAFG00020003253	RAB18	100	99.515	ENSFCAG00000027161	RAB18	100	99.515	Felis_catus
ENSCAFG00020003253	RAB18	100	96.135	ENSFALG00000007160	RAB18	100	96.135	Ficedula_albicollis
ENSCAFG00020003253	RAB18	99	84.878	ENSFHEG00000020035	rab18b	99	84.390	Fundulus_heteroclitus
ENSCAFG00020003253	RAB18	99	79.512	ENSGMOG00000016608	rab18b	99	79.024	Gadus_morhua
ENSCAFG00020003253	RAB18	100	97.087	ENSGALG00000007435	RAB18	100	97.087	Gallus_gallus
ENSCAFG00020003253	RAB18	99	84.878	ENSGAFG00000008560	rab18b	99	84.390	Gambusia_affinis
ENSCAFG00020003253	RAB18	99	83.415	ENSGACG00000016395	rab18b	99	82.927	Gasterosteus_aculeatus
ENSCAFG00020003253	RAB18	100	98.544	ENSGGOG00000008086	RAB18	100	98.544	Gorilla_gorilla
ENSCAFG00020003253	RAB18	99	85.366	ENSHBUG00000003696	rab18b	99	85.366	Haplochromis_burtoni
ENSCAFG00020003253	RAB18	100	96.117	ENSHGLG00000004365	RAB18	100	96.117	Heterocephalus_glaber_female
ENSCAFG00020003253	RAB18	99	80.000	ENSHGLG00000007301	-	88	85.714	Heterocephalus_glaber_female
ENSCAFG00020003253	RAB18	99	80.000	ENSHGLG00100009117	-	88	85.714	Heterocephalus_glaber_male
ENSCAFG00020003253	RAB18	100	96.117	ENSHGLG00100013089	-	100	96.117	Heterocephalus_glaber_male
ENSCAFG00020003253	RAB18	99	83.902	ENSHCOG00000002217	rab18b	99	83.415	Hippocampus_comes
ENSCAFG00020003253	RAB18	100	84.466	ENSIPUG00000010859	rab18b	100	84.466	Ictalurus_punctatus
ENSCAFG00020003253	RAB18	100	97.573	ENSSTOG00000014560	-	100	97.573	Ictidomys_tridecemlineatus
ENSCAFG00020003253	RAB18	99	85.366	ENSKMAG00000007364	rab18b	99	84.878	Kryptolebias_marmoratus
ENSCAFG00020003253	RAB18	99	86.341	ENSLBEG00000019428	rab18b	99	85.854	Labrus_bergylta
ENSCAFG00020003253	RAB18	100	79.612	ENSLACG00000011256	rab18b	91	83.422	Latimeria_chalumnae
ENSCAFG00020003253	RAB18	100	98.058	ENSLAFG00000015582	RAB18	100	98.058	Loxodonta_africana
ENSCAFG00020003253	RAB18	100	98.544	ENSMFAG00000006430	RAB18	100	98.544	Macaca_fascicularis
ENSCAFG00020003253	RAB18	100	97.087	ENSMMUG00000046971	RAB18	74	97.087	Macaca_mulatta
ENSCAFG00020003253	RAB18	100	98.544	ENSMNEG00000038180	RAB18	100	98.544	Macaca_nemestrina
ENSCAFG00020003253	RAB18	100	98.544	ENSMLEG00000033595	RAB18	100	98.544	Mandrillus_leucophaeus
ENSCAFG00020003253	RAB18	100	82.524	ENSMAMG00000018445	rab18b	100	82.524	Mastacembelus_armatus
ENSCAFG00020003253	RAB18	99	85.366	ENSMZEG00005008244	rab18b	99	85.366	Maylandia_zebra
ENSCAFG00020003253	RAB18	94	89.899	ENSMAUG00000020698	-	94	91.525	Mesocricetus_auratus
ENSCAFG00020003253	RAB18	100	98.544	ENSMICG00000017280	RAB18	100	98.544	Microcebus_murinus
ENSCAFG00020003253	RAB18	100	98.058	ENSMOCG00000013044	Rab18	100	98.058	Microtus_ochrogaster
ENSCAFG00020003253	RAB18	99	72.222	ENSMMOG00000017849	rab18b	99	72.222	Mola_mola
ENSCAFG00020003253	RAB18	100	96.602	ENSMODG00000008253	RAB18	100	96.602	Monodelphis_domestica
ENSCAFG00020003253	RAB18	100	84.466	ENSMODG00000024936	-	94	86.458	Monodelphis_domestica
ENSCAFG00020003253	RAB18	99	84.878	ENSMALG00000005069	rab18b	99	84.878	Monopterus_albus
ENSCAFG00020003253	RAB18	100	98.058	MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	Mus_caroli
ENSCAFG00020003253	RAB18	100	98.058	ENSMUSG00000073639	Rab18	100	98.058	Mus_musculus
ENSCAFG00020003253	RAB18	100	98.058	MGP_PahariEiJ_G0018716	Rab18	100	98.058	Mus_pahari
ENSCAFG00020003253	RAB18	100	98.058	MGP_SPRETEiJ_G0022894	Rab18	100	98.058	Mus_spretus
ENSCAFG00020003253	RAB18	100	100.000	ENSMPUG00000010592	RAB18	100	100.000	Mustela_putorius_furo
ENSCAFG00020003253	RAB18	100	86.017	ENSMLUG00000027295	RAB18	100	86.017	Myotis_lucifugus
ENSCAFG00020003253	RAB18	100	98.544	ENSNGAG00000001465	Rab18	100	98.544	Nannospalax_galili
ENSCAFG00020003253	RAB18	99	84.878	ENSNBRG00000008137	rab18b	99	84.878	Neolamprologus_brichardi
ENSCAFG00020003253	RAB18	100	98.544	ENSNLEG00000016970	RAB18	100	98.544	Nomascus_leucogenys
ENSCAFG00020003253	RAB18	100	97.573	ENSODEG00000004150	-	100	97.573	Octodon_degus
ENSCAFG00020003253	RAB18	99	84.878	ENSONIG00000018673	rab18b	99	84.878	Oreochromis_niloticus
ENSCAFG00020003253	RAB18	100	96.602	ENSOANG00000021391	RAB18	100	96.602	Ornithorhynchus_anatinus
ENSCAFG00020003253	RAB18	100	97.087	ENSOCUG00000022307	RAB18	100	97.087	Oryctolagus_cuniculus
ENSCAFG00020003253	RAB18	99	83.902	ENSORLG00000009609	rab18b	99	83.902	Oryzias_latipes
ENSCAFG00020003253	RAB18	99	83.902	ENSORLG00020011590	rab18b	99	83.902	Oryzias_latipes_hni
ENSCAFG00020003253	RAB18	99	83.902	ENSORLG00015007182	rab18b	99	83.902	Oryzias_latipes_hsok
ENSCAFG00020003253	RAB18	99	83.902	ENSOMEG00000007546	rab18b	99	83.902	Oryzias_melastigma
ENSCAFG00020003253	RAB18	100	98.058	ENSOGAG00000028015	RAB18	100	98.058	Otolemur_garnettii
ENSCAFG00020003253	RAB18	100	99.029	ENSOARG00000016208	RAB18	100	99.029	Ovis_aries
ENSCAFG00020003253	RAB18	100	98.544	ENSPPAG00000041625	RAB18	100	98.544	Pan_paniscus
ENSCAFG00020003253	RAB18	100	99.515	ENSPPRG00000010314	RAB18	100	99.515	Panthera_pardus
ENSCAFG00020003253	RAB18	100	99.515	ENSPTIG00000011667	RAB18	100	99.515	Panthera_tigris_altaica
ENSCAFG00020003253	RAB18	100	98.544	ENSPTRG00000002384	RAB18	100	98.544	Pan_troglodytes
ENSCAFG00020003253	RAB18	100	98.544	ENSPANG00000023005	RAB18	100	98.544	Papio_anubis
ENSCAFG00020003253	RAB18	98	84.804	ENSPMAG00000005322	rab18b	98	84.804	Petromyzon_marinus
ENSCAFG00020003253	RAB18	100	96.602	ENSPCIG00000028705	-	88	96.602	Phascolarctos_cinereus
ENSCAFG00020003253	RAB18	99	84.878	ENSPFOG00000013491	rab18b	99	84.878	Poecilia_formosa
ENSCAFG00020003253	RAB18	99	84.878	ENSPLAG00000019136	rab18b	99	84.878	Poecilia_latipinna
ENSCAFG00020003253	RAB18	99	84.878	ENSPMEG00000008223	rab18b	99	84.878	Poecilia_mexicana
ENSCAFG00020003253	RAB18	100	98.544	ENSPPYG00000002172	RAB18	100	98.544	Pongo_abelii
ENSCAFG00020003253	RAB18	100	98.544	ENSPCOG00000018906	RAB18	100	98.544	Propithecus_coquereli
ENSCAFG00020003253	RAB18	99	85.366	ENSPNYG00000001751	rab18b	99	85.366	Pundamilia_nyererei
ENSCAFG00020003253	RAB18	100	86.893	ENSPNAG00000002404	rab18b	100	86.893	Pygocentrus_nattereri
ENSCAFG00020003253	RAB18	100	97.573	ENSRNOG00000018972	Rab18	100	97.573	Rattus_norvegicus
ENSCAFG00020003253	RAB18	100	98.058	ENSRBIG00000035948	RAB18	100	98.058	Rhinopithecus_bieti
ENSCAFG00020003253	RAB18	100	98.544	ENSRROG00000040563	RAB18	100	98.544	Rhinopithecus_roxellana
ENSCAFG00020003253	RAB18	100	97.087	ENSSHAG00000007613	RAB18	100	97.087	Sarcophilus_harrisii
ENSCAFG00020003253	RAB18	99	83.415	ENSSMAG00000011814	rab18b	99	83.415	Scophthalmus_maximus
ENSCAFG00020003253	RAB18	99	84.878	ENSSDUG00000005960	rab18b	99	84.878	Seriola_dumerili
ENSCAFG00020003253	RAB18	99	84.878	ENSSLDG00000006014	rab18b	99	84.878	Seriola_lalandi_dorsalis
ENSCAFG00020003253	RAB18	99	84.390	ENSSPAG00000020875	rab18b	99	84.390	Stegastes_partitus
ENSCAFG00020003253	RAB18	100	99.029	ENSSSCG00000028655	RAB18	100	99.029	Sus_scrofa
ENSCAFG00020003253	RAB18	100	85.043	ENSTGUG00000001105	-	100	85.043	Taeniopygia_guttata
ENSCAFG00020003253	RAB18	99	84.878	ENSTRUG00000004283	rab18b	99	84.878	Takifugu_rubripes
ENSCAFG00020003253	RAB18	99	82.927	ENSTNIG00000007882	rab18b	99	82.927	Tetraodon_nigroviridis
ENSCAFG00020003253	RAB18	100	100.000	ENSVVUG00000001705	RAB18	100	100.000	Vulpes_vulpes
ENSCAFG00020003253	RAB18	99	85.366	ENSXMAG00000006945	rab18b	99	85.366	Xiphophorus_maculatus