EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020003638 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 737 bases
Position: chrQKWQ01002044.1:18839407-18840143
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020004402	LSM	PF01423.22	6.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020005094	-	234	-	ENSCAFP00020004402	77 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020003638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020003638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020003638	-	53	95.122	ENSCAFG00020020370	-	56	92.857
ENSCAFG00020003638	-	62	83.333	ENSCAFG00020013247	-	57	83.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020003638	-	84	73.846	ENSG00000125835	SNRPB	86	73.846	Homo_sapiens
ENSCAFG00020003638	-	60	80.435	ENSAPEG00000008846	-	70	80.435	Amphiprion_percula
ENSCAFG00020003638	-	74	58.621	ENSBTAG00000024548	-	78	58.621	Bos_taurus
ENSCAFG00020003638	-	62	81.250	ENSCJAG00000041673	-	61	81.250	Callithrix_jacchus
ENSCAFG00020003638	-	71	58.929	ENSCHIG00000024610	-	77	58.929	Capra_hircus
ENSCAFG00020003638	-	70	68.519	ENSCCAG00000035140	-	72	82.927	Cebus_capucinus
ENSCAFG00020003638	-	100	81.707	ENSCANG00000019461	SNRPB	100	81.707	Colobus_angolensis_palliatus
ENSCAFG00020003638	-	56	72.093	ENSFCAG00000041049	-	53	72.093	Felis_catus
ENSCAFG00020003638	-	61	72.340	ENSFHEG00000006534	-	64	72.340	Fundulus_heteroclitus
ENSCAFG00020003638	-	90	90.541	ENSMAUG00000020656	-	95	90.541	Mesocricetus_auratus
ENSCAFG00020003638	-	55	97.619	ENSMAUG00000006516	-	65	97.619	Mesocricetus_auratus
ENSCAFG00020003638	-	71	81.818	MGP_CAROLIEiJ_G0024293	Snrpb	74	81.818	Mus_caroli
ENSCAFG00020003638	-	71	81.818	ENSMUSG00000027404	Snrpb	74	81.818	Mus_musculus
ENSCAFG00020003638	-	71	81.818	MGP_PahariEiJ_G0025738	Snrpb	74	81.818	Mus_pahari
ENSCAFG00020003638	-	71	83.636	MGP_SPRETEiJ_G0025213	Snrpb	73	83.636	Mus_spretus
ENSCAFG00020003638	-	91	52.857	ENSPPRG00000024804	-	63	75.000	Panthera_pardus
ENSCAFG00020003638	-	71	61.818	ENSPPRG00000018908	-	63	61.818	Panthera_pardus
ENSCAFG00020003638	-	73	78.571	ENSPMAG00000004923	SNRPB	63	78.571	Petromyzon_marinus
ENSCAFG00020003638	-	88	88.235	ENSRNOG00000006961	Snrpb	92	88.235	Rattus_norvegicus
ENSCAFG00020003638	-	57	68.182	ENSUAMG00000016301	-	59	68.182	Ursus_americanus
ENSCAFG00020003638	-	57	68.182	ENSUMAG00000011571	-	53	68.182	Ursus_maritimus
ENSCAFG00020003638	-	90	60.870	ENSVVUG00000011423	-	88	60.870	Vulpes_vulpes