EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020004161 (Gene tree)
Gene ID
112642331
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Plus strand
Length
14291 bases
Position
chrQKWQ01002063.1:3274219-3288509
Accession
112642331
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020005062PABPPF00658.182.3e-3111
ENSCAFP00020005069PABPPF00658.181.1e-2711
ENSCAFP00020005062RRM_5PF13893.64.2e-0912
ENSCAFP00020005062RRM_5PF13893.64.2e-0922
ENSCAFP00020005069RRM_5PF13893.65.5e-0912
ENSCAFP00020005069RRM_5PF13893.65.5e-0922
ENSCAFP00020005062RRM_1PF00076.224.9e-9214
ENSCAFP00020005062RRM_1PF00076.224.9e-9224
ENSCAFP00020005062RRM_1PF00076.224.9e-9234
ENSCAFP00020005062RRM_1PF00076.224.9e-9244
ENSCAFP00020005069RRM_1PF00076.226.5e-9214
ENSCAFP00020005069RRM_1PF00076.226.5e-9224
ENSCAFP00020005069RRM_1PF00076.226.5e-9234
ENSCAFP00020005069RRM_1PF00076.226.5e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020005870PABPC4-2022073-ENSCAFP00020005069690 (aa)--
ENSCAFT00020005863PABPC4-2012314-ENSCAFP00020005062660 (aa)XP_025275614UPI00005A2D06
Gene Model
Click here to download ENSCAFG00020004161's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020004161's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020004161PABPC45537.500ENSCAFG00020005823CELF25637.500
ENSCAFG00020004161PABPC46857.778ENSCAFG00020019182-7354.724
ENSCAFG00020004161PABPC45736.111ENSCAFG00020004614ELAVL39233.735
ENSCAFG00020004161PABPC45530.370ENSCAFG00020001832TIA17030.370
ENSCAFG00020004161PABPC49975.224ENSCAFG00020000440PABPC19974.925
ENSCAFG00020004161PABPC45730.625ENSCAFG00020013581ELAVL49030.625
ENSCAFG00020004161PABPC49962.861ENSCAFG00020013828PABPC1L9963.110
ENSCAFG00020004161PABPC45774.757ENSCAFG00020002052-9974.757
ENSCAFG00020004161PABPC45631.579ENSCAFG00020013836ELAVL29134.940
ENSCAFG00020004161PABPC45231.250ENSCAFG00020013891TIAL17330.996
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020004161PABPC410099.091ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCAFG00020004161PABPC49979.545ENSAPOG00000001161pabpc410079.821Acanthochromis_polyacanthus
ENSCAFG00020004161PABPC49854.839ENSAMEG00000015083-9954.531Ailuropoda_melanoleuca
ENSCAFG00020004161PABPC410099.848ENSAMEG00000011535-10099.848Ailuropoda_melanoleuca
ENSCAFG00020004161PABPC410079.970ENSACIG00000023343pabpc410080.568Amphilophus_citrinellus
ENSCAFG00020004161PABPC49979.848ENSAOCG00000021529pabpc410080.120Amphiprion_ocellaris
ENSCAFG00020004161PABPC49979.848ENSAPEG00000019196pabpc410080.120Amphiprion_percula
ENSCAFG00020004161PABPC49978.820ENSATEG00000007402pabpc410079.254Anabas_testudineus
ENSCAFG00020004161PABPC49987.557ENSAPLG00000009729-9692.040Anas_platyrhynchos
ENSCAFG00020004161PABPC49985.544ENSACAG00000002544PABPC410085.544Anolis_carolinensis
ENSCAFG00020004161PABPC410098.939ENSANAG00000025079PABPC410098.939Aotus_nancymaae
ENSCAFG00020004161PABPC410079.671ENSACLG00000019558pabpc410080.269Astatotilapia_calliptera
ENSCAFG00020004161PABPC49975.909ENSAMXG00000018779pabpc49976.515Astyanax_mexicanus
ENSCAFG00020004161PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSCAFG00020004161PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCAFG00020004161PABPC47882.784ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSCAFG00020004161PABPC410098.788ENSCJAG00000002512-10098.788Callithrix_jacchus
ENSCAFG00020004161PABPC499100.000ENSCAFG00000003081PABPC496100.000Canis_familiaris
ENSCAFG00020004161PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSCAFG00020004161PABPC410099.242ENSCHIG00000019398-10099.242Capra_hircus
ENSCAFG00020004161PABPC410099.091ENSTSYG00000006532PABPC410099.091Carlito_syrichta
ENSCAFG00020004161PABPC49998.784ENSCAPG00000015984PABPC410098.784Cavia_aperea
ENSCAFG00020004161PABPC410098.788ENSCPOG00000009552PABPC410098.788Cavia_porcellus
ENSCAFG00020004161PABPC410098.939ENSCCAG00000037306PABPC410098.939Cebus_capucinus
ENSCAFG00020004161PABPC410099.242ENSCATG00000042164PABPC410099.242Cercocebus_atys
ENSCAFG00020004161PABPC410098.939ENSCLAG00000011899PABPC410098.939Chinchilla_lanigera
ENSCAFG00020004161PABPC410099.242ENSCSAG00000001135PABPC410099.242Chlorocebus_sabaeus
ENSCAFG00020004161PABPC48297.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSCAFG00020004161PABPC49987.860ENSCPBG00000001038PABPC49692.371Chrysemys_picta_bellii
ENSCAFG00020004161PABPC49999.078ENSCANG00000034177PABPC410099.078Colobus_angolensis_palliatus
ENSCAFG00020004161PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSCAFG00020004161PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSCAFG00020004161PABPC410079.223ENSCSEG00000000130pabpc410079.821Cynoglossus_semilaevis
ENSCAFG00020004161PABPC49980.091ENSCVAG00000019246pabpc410080.851Cyprinodon_variegatus
ENSCAFG00020004161PABPC49981.639ENSDARG00000059259pabpc410085.855Danio_rerio
ENSCAFG00020004161PABPC49899.483ENSDNOG00000018444-9999.483Dasypus_novemcinctus
ENSCAFG00020004161PABPC410096.667ENSDORG00000011581Pabpc410096.667Dipodomys_ordii
ENSCAFG00020004161PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCAFG00020004161PABPC48662.039ENSETEG00000009172-9962.087Echinops_telfairi
ENSCAFG00020004161PABPC49773.457ENSEBUG00000013782pabpc49973.565Eptatretus_burgeri
ENSCAFG00020004161PABPC49973.374ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSCAFG00020004161PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSCAFG00020004161PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSCAFG00020004161PABPC410095.909ENSEEUG00000002962PABPC410095.909Erinaceus_europaeus
ENSCAFG00020004161PABPC49980.365ENSELUG00000003195pabpc49584.514Esox_lucius
ENSCAFG00020004161PABPC410099.848ENSFCAG00000015254-10099.848Felis_catus
ENSCAFG00020004161PABPC49987.102ENSFALG00000000543PABPC49691.542Ficedula_albicollis
ENSCAFG00020004161PABPC49066.872ENSFDAG00000010581-10062.857Fukomys_damarensis
ENSCAFG00020004161PABPC410099.091ENSFDAG00000020016-10099.091Fukomys_damarensis
ENSCAFG00020004161PABPC410079.940ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSCAFG00020004161PABPC49979.217ENSGMOG00000019025pabpc49979.940Gadus_morhua
ENSCAFG00020004161PABPC49988.012ENSGALG00000003800PABPC49692.537Gallus_gallus
ENSCAFG00020004161PABPC410080.330ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCAFG00020004161PABPC410078.176ENSGACG00000007179pabpc410078.774Gasterosteus_aculeatus
ENSCAFG00020004161PABPC49987.709ENSGAGG00000001888PABPC49692.206Gopherus_agassizii
ENSCAFG00020004161PABPC410099.091ENSGGOG00000004002PABPC410099.091Gorilla_gorilla
ENSCAFG00020004161PABPC410079.821ENSHBUG00000020206pabpc410080.419Haplochromis_burtoni
ENSCAFG00020004161PABPC410099.242ENSHGLG00000011162PABPC410099.242Heterocephalus_glaber_female
ENSCAFG00020004161PABPC410096.970ENSHGLG00100001580PABPC410096.970Heterocephalus_glaber_male
ENSCAFG00020004161PABPC410079.042ENSHCOG00000012694pabpc410079.341Hippocampus_comes
ENSCAFG00020004161PABPC49879.908ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSCAFG00020004161PABPC410096.818ENSSTOG00000010416PABPC410096.818Ictidomys_tridecemlineatus
ENSCAFG00020004161PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSCAFG00020004161PABPC49991.076ENSKMAG00000013597pabpc49979.669Kryptolebias_marmoratus
ENSCAFG00020004161PABPC410079.018ENSLBEG00000013654pabpc410079.285Labrus_bergylta
ENSCAFG00020004161PABPC49984.314ENSLACG00000011907PABPC49688.468Latimeria_chalumnae
ENSCAFG00020004161PABPC49982.380ENSLOCG00000001877pabpc49587.624Lepisosteus_oculatus
ENSCAFG00020004161PABPC410099.545ENSLAFG00000000151PABPC410099.545Loxodonta_africana
ENSCAFG00020004161PABPC410099.242ENSMFAG00000041481PABPC410099.242Macaca_fascicularis
ENSCAFG00020004161PABPC410099.242ENSMMUG00000007497PABPC410099.242Macaca_mulatta
ENSCAFG00020004161PABPC410099.091ENSMNEG00000043054PABPC410099.091Macaca_nemestrina
ENSCAFG00020004161PABPC410099.242ENSMLEG00000040716PABPC410099.242Mandrillus_leucophaeus
ENSCAFG00020004161PABPC49979.545ENSMAMG00000010025pabpc49882.651Mastacembelus_armatus
ENSCAFG00020004161PABPC410079.522ENSMZEG00005006141pabpc410080.120Maylandia_zebra
ENSCAFG00020004161PABPC49987.248ENSMGAG00000005408PABPC410087.248Meleagris_gallopavo
ENSCAFG00020004161PABPC46989.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCAFG00020004161PABPC47495.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSCAFG00020004161PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCAFG00020004161PABPC48995.093ENSMICG00000016633-10096.441Microcebus_murinus
ENSCAFG00020004161PABPC49973.818ENSMICG00000036729-10076.182Microcebus_murinus
ENSCAFG00020004161PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSCAFG00020004161PABPC410074.222ENSMMOG00000002363pabpc49582.372Mola_mola
ENSCAFG00020004161PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSCAFG00020004161PABPC45674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCAFG00020004161PABPC49979.305ENSMALG00000011017pabpc410079.583Monopterus_albus
ENSCAFG00020004161PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCAFG00020004161PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSCAFG00020004161PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCAFG00020004161PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCAFG00020004161PABPC49978.752MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCAFG00020004161PABPC410099.848ENSMPUG00000014414-10099.848Mustela_putorius_furo
ENSCAFG00020004161PABPC49551.027ENSMPUG00000006836-9952.764Mustela_putorius_furo
ENSCAFG00020004161PABPC410092.576ENSMLUG00000012068PABPC410092.576Myotis_lucifugus
ENSCAFG00020004161PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSCAFG00020004161PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCAFG00020004161PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCAFG00020004161PABPC410096.970ENSNLEG00000011928PABPC410096.970Nomascus_leucogenys
ENSCAFG00020004161PABPC48298.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSCAFG00020004161PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSCAFG00020004161PABPC410098.485ENSODEG00000006592-10098.485Octodon_degus
ENSCAFG00020004161PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSCAFG00020004161PABPC410079.821ENSONIG00000008176pabpc410080.419Oreochromis_niloticus
ENSCAFG00020004161PABPC49987.405ENSOANG00000010001PABPC49691.874Ornithorhynchus_anatinus
ENSCAFG00020004161PABPC49698.892ENSOCUG00000000562PABPC48898.892Oryctolagus_cuniculus
ENSCAFG00020004161PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSCAFG00020004161PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSCAFG00020004161PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSCAFG00020004161PABPC49979.848ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSCAFG00020004161PABPC410096.682ENSOGAG00000004067PABPC410096.682Otolemur_garnettii
ENSCAFG00020004161PABPC410099.242ENSOARG00000020060PABPC410099.242Ovis_aries
ENSCAFG00020004161PABPC410099.091ENSPPAG00000043625PABPC410099.091Pan_paniscus
ENSCAFG00020004161PABPC410099.848ENSPPRG00000024727PABPC410099.848Panthera_pardus
ENSCAFG00020004161PABPC410099.848ENSPTIG00000005829PABPC410099.848Panthera_tigris_altaica
ENSCAFG00020004161PABPC410099.091ENSPTRG00000000573PABPC410099.091Pan_troglodytes
ENSCAFG00020004161PABPC410099.394ENSPANG00000009484PABPC410099.394Papio_anubis
ENSCAFG00020004161PABPC49981.241ENSPKIG00000025356pabpc49886.139Paramormyrops_kingsleyae
ENSCAFG00020004161PABPC49987.860ENSPSIG00000016892PABPC49692.371Pelodiscus_sinensis
ENSCAFG00020004161PABPC410078.012ENSPMGG00000009073pabpc49581.414Periophthalmus_magnuspinnatus
ENSCAFG00020004161PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSCAFG00020004161PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSCAFG00020004161PABPC48970.297ENSPMAG00000002836pabpc410074.177Petromyzon_marinus
ENSCAFG00020004161PABPC49667.505ENSPMAG00000007885pabpc410066.667Petromyzon_marinus
ENSCAFG00020004161PABPC49888.408ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSCAFG00020004161PABPC410079.341ENSPFOG00000002682pabpc410079.940Poecilia_formosa
ENSCAFG00020004161PABPC410079.192ENSPLAG00000010112pabpc410080.389Poecilia_latipinna
ENSCAFG00020004161PABPC49979.787ENSPMEG00000019739pabpc410080.090Poecilia_mexicana
ENSCAFG00020004161PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSCAFG00020004161PABPC410099.091ENSPPYG00000001506PABPC410099.091Pongo_abelii
ENSCAFG00020004161PABPC410094.545ENSPCAG00000003341PABPC410094.545Procavia_capensis
ENSCAFG00020004161PABPC49981.664ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCAFG00020004161PABPC410099.244ENSPCOG00000023725-10099.244Propithecus_coquereli
ENSCAFG00020004161PABPC49998.992ENSPVAG00000002187PABPC410098.992Pteropus_vampyrus
ENSCAFG00020004161PABPC410079.671ENSPNYG00000006134pabpc410080.269Pundamilia_nyererei
ENSCAFG00020004161PABPC410079.940ENSPNAG00000024355pabpc410080.838Pygocentrus_nattereri
ENSCAFG00020004161PABPC410095.606ENSRNOG00000015642Pabpc410095.606Rattus_norvegicus
ENSCAFG00020004161PABPC410093.485ENSRNOG00000028592AABR07035074.110093.485Rattus_norvegicus
ENSCAFG00020004161PABPC410099.242ENSRBIG00000039761PABPC410099.242Rhinopithecus_bieti
ENSCAFG00020004161PABPC410099.242ENSRROG00000033355PABPC410099.242Rhinopithecus_roxellana
ENSCAFG00020004161PABPC410099.091ENSSBOG00000026193PABPC410099.091Saimiri_boliviensis_boliviensis
ENSCAFG00020004161PABPC49888.253ENSSHAG00000018139PABPC49692.371Sarcophilus_harrisii
ENSCAFG00020004161PABPC49982.132ENSSFOG00015023514pabpc49586.278Scleropages_formosus
ENSCAFG00020004161PABPC49979.123ENSSMAG00000009007pabpc49979.274Scophthalmus_maximus
ENSCAFG00020004161PABPC49979.242ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSCAFG00020004161PABPC49979.242ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSCAFG00020004161PABPC410091.818ENSSARG00000000310PABPC410091.818Sorex_araneus
ENSCAFG00020004161PABPC49987.557ENSSPUG00000003204PABPC410087.405Sphenodon_punctatus
ENSCAFG00020004161PABPC49979.879ENSSPAG00000009252pabpc49584.046Stegastes_partitus
ENSCAFG00020004161PABPC48950.673ENSSSCG00000036170-9650.673Sus_scrofa
ENSCAFG00020004161PABPC410099.394ENSSSCG00000003660-10099.394Sus_scrofa
ENSCAFG00020004161PABPC49987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSCAFG00020004161PABPC410079.279ENSTRUG00000005907pabpc49979.880Takifugu_rubripes
ENSCAFG00020004161PABPC410075.867ENSTNIG00000016902pabpc49975.867Tetraodon_nigroviridis
ENSCAFG00020004161PABPC49988.067ENSTBEG00000009035PABPC410088.067Tupaia_belangeri
ENSCAFG00020004161PABPC49983.716ENSTTRG00000014340PABPC410087.395Tursiops_truncatus
ENSCAFG00020004161PABPC410099.848ENSUAMG00000000303PABPC410099.848Ursus_americanus
ENSCAFG00020004161PABPC410099.848ENSUMAG00000019585PABPC410099.848Ursus_maritimus
ENSCAFG00020004161PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSCAFG00020004161PABPC4100100.000ENSVVUG00000005215PABPC4100100.000Vulpes_vulpes
ENSCAFG00020004161PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCAFG00020004161PABPC49979.666ENSXETG00000010946pabpc49683.748Xenopus_tropicalis
ENSCAFG00020004161PABPC49978.073ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCAFG00020004161PABPC410079.491ENSXMAG00000019007pabpc410080.240Xiphophorus_maculatus

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