EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020004209 (Gene tree)
Gene ID: 112658790
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 63213 bases
Position: chrQKWQ01000669.1:6184358-6247570
Accession: 112658790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020005245	La	PF05383.17	1.9e-14	1	1
ENSCAFP00020005239	La	PF05383.17	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020006069	LARP4B-202	1953	-	ENSCAFP00020005245	650 (aa)	-	-
ENSCAFT00020006058	LARP4B-201	2205	-	ENSCAFP00020005239	734 (aa)	XP_025300825	UPI000DC74F06

Gene Model

Click here to download ENSCAFG00020004209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020004209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020004209	LARP4B	86	52.899	ENSCAFG00020014554	LARP4	99	53.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020004209	LARP4B	100	85.656	ENSG00000107929	LARP4B	100	91.228	Homo_sapiens
ENSCAFG00020004209	LARP4B	100	55.744	ENSAPOG00000020531	LARP4B	96	55.601	Acanthochromis_polyacanthus
ENSCAFG00020004209	LARP4B	100	96.730	ENSAMEG00000001810	LARP4B	100	96.730	Ailuropoda_melanoleuca
ENSCAFG00020004209	LARP4B	93	54.937	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSCAFG00020004209	LARP4B	95	58.266	ENSAPEG00000002512	LARP4B	93	58.401	Amphiprion_percula
ENSCAFG00020004209	LARP4B	100	61.290	ENSATEG00000012614	LARP4B	91	56.131	Anabas_testudineus
ENSCAFG00020004209	LARP4B	100	75.200	ENSAPLG00000003813	LARP4B	98	75.200	Anas_platyrhynchos
ENSCAFG00020004209	LARP4B	100	73.698	ENSACAG00000002858	LARP4B	100	73.698	Anolis_carolinensis
ENSCAFG00020004209	LARP4B	100	84.574	ENSANAG00000007531	-	100	84.574	Aotus_nancymaae
ENSCAFG00020004209	LARP4B	100	56.713	ENSACLG00000026356	LARP4B	100	56.462	Astatotilapia_calliptera
ENSCAFG00020004209	LARP4B	91	56.028	ENSAMXG00000003335	larp4b	93	52.224	Astyanax_mexicanus
ENSCAFG00020004209	LARP4B	100	88.179	ENSBTAG00000013899	LARP4B	100	88.179	Bos_taurus
ENSCAFG00020004209	LARP4B	100	84.844	ENSCJAG00000018434	LARP4B	100	84.844	Callithrix_jacchus
ENSCAFG00020004209	LARP4B	100	87.500	ENSCHIG00000013543	LARP4B	100	87.500	Capra_hircus
ENSCAFG00020004209	LARP4B	80	88.889	ENSTSYG00000002568	LARP4B	100	88.889	Carlito_syrichta
ENSCAFG00020004209	LARP4B	96	81.654	ENSCAPG00000009725	LARP4B	97	75.770	Cavia_aperea
ENSCAFG00020004209	LARP4B	100	89.078	ENSCPOG00000009375	LARP4B	100	86.333	Cavia_porcellus
ENSCAFG00020004209	LARP4B	100	84.844	ENSCCAG00000024869	LARP4B	100	84.844	Cebus_capucinus
ENSCAFG00020004209	LARP4B	100	86.062	ENSCATG00000019750	LARP4B	100	86.062	Cercocebus_atys
ENSCAFG00020004209	LARP4B	100	89.346	ENSCLAG00000011570	LARP4B	100	85.811	Chinchilla_lanigera
ENSCAFG00020004209	LARP4B	61	94.595	ENSCHOG00000007831	-	66	85.484	Choloepus_hoffmanni
ENSCAFG00020004209	LARP4B	100	74.499	ENSCPBG00000017063	LARP4B	100	74.499	Chrysemys_picta_bellii
ENSCAFG00020004209	LARP4B	100	84.032	ENSCANG00000038021	LARP4B	100	84.032	Colobus_angolensis_palliatus
ENSCAFG00020004209	LARP4B	100	86.301	ENSCGRG00001022930	Larp4b	100	88.070	Cricetulus_griseus_chok1gshd
ENSCAFG00020004209	LARP4B	100	86.301	ENSCGRG00000006022	Larp4b	100	88.070	Cricetulus_griseus_crigri
ENSCAFG00020004209	LARP4B	100	53.633	ENSCSEG00000007342	LARP4B	100	53.386	Cynoglossus_semilaevis
ENSCAFG00020004209	LARP4B	100	54.500	ENSCVAG00000008910	LARP4B	91	57.084	Cyprinodon_variegatus
ENSCAFG00020004209	LARP4B	89	57.075	ENSDARG00000062146	larp4b	92	51.948	Danio_rerio
ENSCAFG00020004209	LARP4B	93	87.637	ENSDNOG00000045543	-	100	87.097	Dasypus_novemcinctus
ENSCAFG00020004209	LARP4B	100	83.919	ENSDORG00000009328	Larp4b	100	86.292	Dipodomys_ordii
ENSCAFG00020004209	LARP4B	89	78.862	ENSETEG00000011249	LARP4B	91	79.310	Echinops_telfairi
ENSCAFG00020004209	LARP4B	100	91.417	ENSEASG00005019068	-	100	91.417	Equus_asinus_asinus
ENSCAFG00020004209	LARP4B	100	91.553	ENSECAG00000024040	LARP4B	100	91.553	Equus_caballus
ENSCAFG00020004209	LARP4B	100	85.346	ENSEEUG00000008391	LARP4B	98	85.346	Erinaceus_europaeus
ENSCAFG00020004209	LARP4B	100	56.305	ENSELUG00000008626	LARP4B	94	57.540	Esox_lucius
ENSCAFG00020004209	LARP4B	87	48.130	ENSELUG00000001417	-	94	40.964	Esox_lucius
ENSCAFG00020004209	LARP4B	100	94.293	ENSFCAG00000000721	-	100	94.293	Felis_catus
ENSCAFG00020004209	LARP4B	100	73.965	ENSFALG00000006961	LARP4B	100	73.965	Ficedula_albicollis
ENSCAFG00020004209	LARP4B	100	86.351	ENSFDAG00000006158	LARP4B	97	86.351	Fukomys_damarensis
ENSCAFG00020004209	LARP4B	100	52.078	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSCAFG00020004209	LARP4B	81	65.499	ENSGMOG00000010818	-	81	64.516	Gadus_morhua
ENSCAFG00020004209	LARP4B	100	74.734	ENSGALG00000006672	LARP4B	100	74.734	Gallus_gallus
ENSCAFG00020004209	LARP4B	100	58.540	ENSGACG00000017535	LARP4B	98	57.792	Gasterosteus_aculeatus
ENSCAFG00020004209	LARP4B	91	76.720	ENSGAGG00000008598	LARP4B	100	76.720	Gopherus_agassizii
ENSCAFG00020004209	LARP4B	100	85.521	ENSGGOG00000003572	LARP4B	100	85.521	Gorilla_gorilla
ENSCAFG00020004209	LARP4B	100	56.336	ENSHBUG00000007535	LARP4B	100	55.583	Haplochromis_burtoni
ENSCAFG00020004209	LARP4B	100	86.792	ENSHGLG00000012936	LARP4B	100	86.792	Heterocephalus_glaber_female
ENSCAFG00020004209	LARP4B	87	75.728	ENSHGLG00100017261	-	100	71.846	Heterocephalus_glaber_male
ENSCAFG00020004209	LARP4B	100	86.892	ENSHGLG00100016220	-	100	86.892	Heterocephalus_glaber_male
ENSCAFG00020004209	LARP4B	85	57.424	ENSHCOG00000011581	LARP4B	81	55.134	Hippocampus_comes
ENSCAFG00020004209	LARP4B	91	55.944	ENSIPUG00000009705	larp4b	93	52.137	Ictalurus_punctatus
ENSCAFG00020004209	LARP4B	100	84.232	ENSSTOG00000000587	LARP4B	100	84.232	Ictidomys_tridecemlineatus
ENSCAFG00020004209	LARP4B	100	85.386	ENSJJAG00000020847	Larp4b	100	85.386	Jaculus_jaculus
ENSCAFG00020004209	LARP4B	100	55.000	ENSKMAG00000021674	LARP4B	95	57.926	Kryptolebias_marmoratus
ENSCAFG00020004209	LARP4B	80	60.196	ENSLBEG00000025293	-	81	60.685	Labrus_bergylta
ENSCAFG00020004209	LARP4B	91	65.167	ENSLACG00000009492	LARP4B	100	65.167	Latimeria_chalumnae
ENSCAFG00020004209	LARP4B	100	64.529	ENSLOCG00000012290	larp4b	100	65.079	Lepisosteus_oculatus
ENSCAFG00020004209	LARP4B	100	84.615	ENSLAFG00000015334	LARP4B	100	83.311	Loxodonta_africana
ENSCAFG00020004209	LARP4B	100	86.062	ENSMFAG00000001766	LARP4B	100	83.897	Macaca_fascicularis
ENSCAFG00020004209	LARP4B	100	86.062	ENSMMUG00000005279	LARP4B	100	86.062	Macaca_mulatta
ENSCAFG00020004209	LARP4B	100	85.927	ENSMNEG00000014019	LARP4B	100	83.762	Macaca_nemestrina
ENSCAFG00020004209	LARP4B	100	85.946	ENSMLEG00000035198	LARP4B	100	85.946	Mandrillus_leucophaeus
ENSCAFG00020004209	LARP4B	100	55.473	ENSMAMG00000013742	LARP4B	92	56.950	Mastacembelus_armatus
ENSCAFG00020004209	LARP4B	80	62.237	ENSMZEG00005006498	-	96	60.611	Maylandia_zebra
ENSCAFG00020004209	LARP4B	91	57.045	ENSMZEG00005014594	-	100	56.772	Maylandia_zebra
ENSCAFG00020004209	LARP4B	100	73.565	ENSMGAG00000005472	LARP4B	100	73.565	Meleagris_gallopavo
ENSCAFG00020004209	LARP4B	100	86.253	ENSMAUG00000021657	Larp4b	100	88.421	Mesocricetus_auratus
ENSCAFG00020004209	LARP4B	100	81.326	ENSMICG00000001301	LARP4B	100	81.055	Microcebus_murinus
ENSCAFG00020004209	LARP4B	90	87.895	ENSMOCG00000021452	Larp4b	100	87.895	Microtus_ochrogaster
ENSCAFG00020004209	LARP4B	83	59.748	ENSMMOG00000011253	-	91	59.277	Mola_mola
ENSCAFG00020004209	LARP4B	100	76.683	ENSMODG00000005957	LARP4B	100	72.222	Monodelphis_domestica
ENSCAFG00020004209	LARP4B	100	48.797	ENSMALG00000012432	LARP4B	100	49.668	Monopterus_albus
ENSCAFG00020004209	LARP4B	100	85.405	MGP_CAROLIEiJ_G0018216	Larp4b	100	85.541	Mus_caroli
ENSCAFG00020004209	LARP4B	100	85.175	ENSMUSG00000033499	Larp4b	100	88.246	Mus_musculus
ENSCAFG00020004209	LARP4B	100	85.946	MGP_PahariEiJ_G0019266	Larp4b	100	88.204	Mus_pahari
ENSCAFG00020004209	LARP4B	100	85.040	MGP_SPRETEiJ_G0019074	Larp4b	100	88.070	Mus_spretus
ENSCAFG00020004209	LARP4B	100	96.594	ENSMPUG00000016220	LARP4B	97	96.594	Mustela_putorius_furo
ENSCAFG00020004209	LARP4B	94	86.754	ENSMLUG00000005880	LARP4B	100	86.754	Myotis_lucifugus
ENSCAFG00020004209	LARP4B	100	86.468	ENSNGAG00000001750	Larp4b	100	86.468	Nannospalax_galili
ENSCAFG00020004209	LARP4B	80	55.089	ENSNBRG00000020018	LARP4B	88	54.604	Neolamprologus_brichardi
ENSCAFG00020004209	LARP4B	100	85.792	ENSNLEG00000013442	LARP4B	100	85.792	Nomascus_leucogenys
ENSCAFG00020004209	LARP4B	79	86.842	ENSMEUG00000013114	-	70	86.842	Notamacropus_eugenii
ENSCAFG00020004209	LARP4B	98	87.893	ENSOPRG00000003300	LARP4B	100	82.976	Ochotona_princeps
ENSCAFG00020004209	LARP4B	100	82.003	ENSODEG00000001109	LARP4B	100	83.451	Octodon_degus
ENSCAFG00020004209	LARP4B	100	66.042	ENSONIG00000017705	LARP4B	100	57.990	Oreochromis_niloticus
ENSCAFG00020004209	LARP4B	100	75.540	ENSOANG00000006100	LARP4B	100	72.655	Ornithorhynchus_anatinus
ENSCAFG00020004209	LARP4B	100	84.777	ENSOCUG00000004950	LARP4B	97	84.777	Oryctolagus_cuniculus
ENSCAFG00020004209	LARP4B	100	53.962	ENSORLG00000006080	LARP4B	92	55.707	Oryzias_latipes
ENSCAFG00020004209	LARP4B	100	53.567	ENSORLG00020020940	LARP4B	92	55.158	Oryzias_latipes_hni
ENSCAFG00020004209	LARP4B	100	54.214	ENSORLG00015020608	LARP4B	91	56.181	Oryzias_latipes_hsok
ENSCAFG00020004209	LARP4B	100	52.551	ENSOMEG00000019619	LARP4B	92	54.558	Oryzias_melastigma
ENSCAFG00020004209	LARP4B	94	82.739	ENSOGAG00000011540	LARP4B	100	82.739	Otolemur_garnettii
ENSCAFG00020004209	LARP4B	100	87.415	ENSOARG00000015320	LARP4B	98	87.415	Ovis_aries
ENSCAFG00020004209	LARP4B	100	85.386	ENSPPAG00000039232	LARP4B	100	85.386	Pan_paniscus
ENSCAFG00020004209	LARP4B	100	94.414	ENSPPRG00000009489	LARP4B	100	94.414	Panthera_pardus
ENSCAFG00020004209	LARP4B	100	94.278	ENSPTIG00000008543	LARP4B	100	94.278	Panthera_tigris_altaica
ENSCAFG00020004209	LARP4B	100	85.386	ENSPTRG00000002235	LARP4B	100	85.386	Pan_troglodytes
ENSCAFG00020004209	LARP4B	100	86.062	ENSPANG00000023546	LARP4B	100	83.897	Papio_anubis
ENSCAFG00020004209	LARP4B	98	56.300	ENSPKIG00000012368	LARP4B	89	59.238	Paramormyrops_kingsleyae
ENSCAFG00020004209	LARP4B	77	85.714	ENSPSIG00000005600	LARP4B	99	85.714	Pelodiscus_sinensis
ENSCAFG00020004209	LARP4B	97	51.499	ENSPMGG00000008261	LARP4B	87	52.199	Periophthalmus_magnuspinnatus
ENSCAFG00020004209	LARP4B	100	86.739	ENSPEMG00000014052	Larp4b	100	86.739	Peromyscus_maniculatus_bairdii
ENSCAFG00020004209	LARP4B	100	53.923	ENSPFOG00000000029	LARP4B	92	56.680	Poecilia_formosa
ENSCAFG00020004209	LARP4B	100	63.658	ENSPLAG00000002871	LARP4B	88	63.658	Poecilia_latipinna
ENSCAFG00020004209	LARP4B	100	53.731	ENSPMEG00000016361	LARP4B	96	54.616	Poecilia_mexicana
ENSCAFG00020004209	LARP4B	100	85.676	ENSPPYG00000002035	LARP4B	97	85.676	Pongo_abelii
ENSCAFG00020004209	LARP4B	100	85.521	ENSPCOG00000014688	LARP4B	100	85.521	Propithecus_coquereli
ENSCAFG00020004209	LARP4B	85	100.000	ENSPVAG00000009784	LARP4B	88	100.000	Pteropus_vampyrus
ENSCAFG00020004209	LARP4B	100	56.587	ENSPNYG00000024252	LARP4B	92	57.802	Pundamilia_nyererei
ENSCAFG00020004209	LARP4B	90	57.783	ENSPNAG00000028956	larp4b	92	52.899	Pygocentrus_nattereri
ENSCAFG00020004209	LARP4B	99	86.333	ENSRNOG00000015888	Larp4b	100	86.468	Rattus_norvegicus
ENSCAFG00020004209	LARP4B	100	85.792	ENSRBIG00000033294	LARP4B	100	85.792	Rhinopithecus_bieti
ENSCAFG00020004209	LARP4B	100	85.656	ENSRROG00000033879	LARP4B	100	85.656	Rhinopithecus_roxellana
ENSCAFG00020004209	LARP4B	100	79.702	ENSSBOG00000021109	LARP4B	100	79.702	Saimiri_boliviensis_boliviensis
ENSCAFG00020004209	LARP4B	100	76.739	ENSSHAG00000013392	LARP4B	100	74.465	Sarcophilus_harrisii
ENSCAFG00020004209	LARP4B	92	59.687	ENSSFOG00015003256	LARP4B	82	60.435	Scleropages_formosus
ENSCAFG00020004209	LARP4B	82	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSCAFG00020004209	LARP4B	100	56.149	ENSSDUG00000006704	LARP4B	92	57.951	Seriola_dumerili
ENSCAFG00020004209	LARP4B	80	61.699	ENSSLDG00000020660	LARP4B	91	61.661	Seriola_lalandi_dorsalis
ENSCAFG00020004209	LARP4B	63	95.283	ENSSARG00000001243	-	79	95.283	Sorex_araneus
ENSCAFG00020004209	LARP4B	79	78.098	ENSSPUG00000013734	-	91	78.098	Sphenodon_punctatus
ENSCAFG00020004209	LARP4B	100	71.660	ENSSPUG00000002102	-	100	71.660	Sphenodon_punctatus
ENSCAFG00020004209	LARP4B	85	74.194	ENSSPAG00000014628	LARP4B	92	74.194	Stegastes_partitus
ENSCAFG00020004209	LARP4B	100	86.376	ENSSSCG00000011162	LARP4B	100	87.500	Sus_scrofa
ENSCAFG00020004209	LARP4B	100	77.404	ENSTGUG00000000811	-	100	74.263	Taeniopygia_guttata
ENSCAFG00020004209	LARP4B	98	65.301	ENSTNIG00000007991	LARP4B	100	54.230	Tetraodon_nigroviridis
ENSCAFG00020004209	LARP4B	100	56.016	ENSTNIG00000004571	-	91	57.997	Tetraodon_nigroviridis
ENSCAFG00020004209	LARP4B	89	93.447	ENSTTRG00000011151	LARP4B	90	91.767	Tursiops_truncatus
ENSCAFG00020004209	LARP4B	88	98.137	ENSUAMG00000016461	LARP4B	95	98.137	Ursus_americanus
ENSCAFG00020004209	LARP4B	100	97.956	ENSUMAG00000016127	LARP4B	100	97.956	Ursus_maritimus
ENSCAFG00020004209	LARP4B	52	93.820	ENSVPAG00000000128	-	73	93.820	Vicugna_pacos
ENSCAFG00020004209	LARP4B	100	99.319	ENSVVUG00000008641	LARP4B	100	99.319	Vulpes_vulpes
ENSCAFG00020004209	LARP4B	99	73.986	ENSXETG00000016882	larp4b	100	68.874	Xenopus_tropicalis
ENSCAFG00020004209	LARP4B	100	51.613	ENSXCOG00000019952	LARP4B	68	85.039	Xiphophorus_couchianus
ENSCAFG00020004209	LARP4B	100	54.261	ENSXMAG00000021533	LARP4B	92	56.445	Xiphophorus_maculatus