EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020004285 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 4871 bases
Position: chrQKWQ01001372.1:5596993-5601863
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020005224	SRP19	PF01922.17	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020006047	-	336	-	ENSCAFP00020005224	111 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020004285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020004285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020004285	-	93	96.154	ENSCAFG00020022437	-	78	96.154
ENSCAFG00020004285	-	93	96.154	ENSCAFG00020014267	-	72	96.154
ENSCAFG00020004285	-	86	89.691	ENSCAFG00020008822	-	73	93.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020004285	-	93	95.192	ENSG00000153037	SRP19	72	95.192	Homo_sapiens
ENSCAFG00020004285	-	85	69.474	ENSAPOG00000002199	srp19	64	68.478	Acanthochromis_polyacanthus
ENSCAFG00020004285	-	86	93.750	ENSAMEG00000012623	SRP19	63	93.478	Ailuropoda_melanoleuca
ENSCAFG00020004285	-	85	67.368	ENSACIG00000005082	srp19	64	66.304	Amphilophus_citrinellus
ENSCAFG00020004285	-	85	68.421	ENSAOCG00000002718	srp19	65	67.391	Amphiprion_ocellaris
ENSCAFG00020004285	-	85	68.421	ENSAPEG00000022170	srp19	65	67.391	Amphiprion_percula
ENSCAFG00020004285	-	85	71.579	ENSATEG00000012472	srp19	65	70.652	Anabas_testudineus
ENSCAFG00020004285	-	84	80.851	ENSAPLG00000002624	SRP19	74	80.435	Anas_platyrhynchos
ENSCAFG00020004285	-	89	78.000	ENSACAG00000007550	SRP19	66	77.551	Anolis_carolinensis
ENSCAFG00020004285	-	91	86.275	ENSANAG00000029862	-	88	85.714	Aotus_nancymaae
ENSCAFG00020004285	-	87	69.697	ENSANAG00000030287	-	64	69.892	Aotus_nancymaae
ENSCAFG00020004285	-	93	95.192	ENSANAG00000032576	-	72	95.192	Aotus_nancymaae
ENSCAFG00020004285	-	92	64.078	ENSACLG00000006259	srp19	89	63.000	Astatotilapia_calliptera
ENSCAFG00020004285	-	84	65.957	ENSAMXG00000043011	srp19	64	65.217	Astyanax_mexicanus
ENSCAFG00020004285	-	86	93.750	ENSBTAG00000012803	SRP19	64	93.478	Bos_taurus
ENSCAFG00020004285	-	70	51.282	WBGene00018159	F37F2.2	55	51.282	Caenorhabditis_elegans
ENSCAFG00020004285	-	86	93.750	ENSCJAG00000038676	-	78	70.000	Callithrix_jacchus
ENSCAFG00020004285	-	82	68.817	ENSCJAG00000045531	-	56	68.817	Callithrix_jacchus
ENSCAFG00020004285	-	93	96.154	ENSCAFG00000031549	SRP19	72	96.154	Canis_familiaris
ENSCAFG00020004285	-	86	93.750	ENSCHIG00000017551	SRP19	64	93.478	Capra_hircus
ENSCAFG00020004285	-	93	96.154	ENSTSYG00000007875	SRP19	72	96.154	Carlito_syrichta
ENSCAFG00020004285	-	93	65.049	ENSCPOG00000036806	SRP19	50	85.075	Cavia_porcellus
ENSCAFG00020004285	-	83	75.532	ENSCCAG00000023426	-	58	75.269	Cebus_capucinus
ENSCAFG00020004285	-	93	95.192	ENSCCAG00000035651	-	72	95.192	Cebus_capucinus
ENSCAFG00020004285	-	82	85.870	ENSCATG00000040513	-	57	85.870	Cercocebus_atys
ENSCAFG00020004285	-	86	84.375	ENSCATG00000039250	-	65	84.375	Cercocebus_atys
ENSCAFG00020004285	-	86	89.583	ENSCLAG00000016055	-	67	89.130	Chinchilla_lanigera
ENSCAFG00020004285	-	86	89.583	ENSCLAG00000004791	-	64	89.130	Chinchilla_lanigera
ENSCAFG00020004285	-	86	93.750	ENSCHOG00000013452	SRP19	64	93.478	Choloepus_hoffmanni
ENSCAFG00020004285	-	84	75.532	ENSCPBG00000013903	SRP19	64	75.824	Chrysemys_picta_bellii
ENSCAFG00020004285	-	86	90.625	ENSCGRG00001020510	Srp19	64	90.217	Cricetulus_griseus_chok1gshd
ENSCAFG00020004285	-	86	90.625	ENSCGRG00000008542	-	72	90.217	Cricetulus_griseus_crigri
ENSCAFG00020004285	-	91	82.075	ENSCGRG00000010716	-	89	81.373	Cricetulus_griseus_crigri
ENSCAFG00020004285	-	85	67.368	ENSCSEG00000010039	srp19	64	66.304	Cynoglossus_semilaevis
ENSCAFG00020004285	-	85	70.526	ENSCVAG00000017621	srp19	65	70.652	Cyprinodon_variegatus
ENSCAFG00020004285	-	84	69.149	ENSDARG00000035699	srp19	65	68.478	Danio_rerio
ENSCAFG00020004285	-	86	92.708	ENSDNOG00000013856	SRP19	64	92.391	Dasypus_novemcinctus
ENSCAFG00020004285	-	93	89.423	ENSDORG00000004746	Srp19	79	89.000	Dipodomys_ordii
ENSCAFG00020004285	-	85	43.158	FBgn0015298	Srp19	51	48.193	Drosophila_melanogaster
ENSCAFG00020004285	-	86	90.625	ENSETEG00000017132	SRP19	64	90.217	Echinops_telfairi
ENSCAFG00020004285	-	78	61.364	ENSEBUG00000006613	srp19	62	60.674	Eptatretus_burgeri
ENSCAFG00020004285	-	86	92.708	ENSEASG00005015182	SRP19	64	92.391	Equus_asinus_asinus
ENSCAFG00020004285	-	86	93.750	ENSEEUG00000007298	SRP19	64	93.478	Erinaceus_europaeus
ENSCAFG00020004285	-	85	65.263	ENSELUG00000004594	srp19	65	65.217	Esox_lucius
ENSCAFG00020004285	-	84	70.213	ENSELUG00000007958	srp19	65	69.565	Esox_lucius
ENSCAFG00020004285	-	93	96.154	ENSFCAG00000025895	SRP19	72	96.154	Felis_catus
ENSCAFG00020004285	-	86	90.625	ENSFDAG00000013543	SRP19	64	90.217	Fukomys_damarensis
ENSCAFG00020004285	-	85	68.421	ENSFHEG00000000493	srp19	65	67.391	Fundulus_heteroclitus
ENSCAFG00020004285	-	85	70.526	ENSGMOG00000003264	srp19	71	71.739	Gadus_morhua
ENSCAFG00020004285	-	84	80.851	ENSGALG00000000218	SRP19	64	80.435	Gallus_gallus
ENSCAFG00020004285	-	85	69.474	ENSGACG00000001093	srp19	61	68.478	Gasterosteus_aculeatus
ENSCAFG00020004285	-	84	76.596	ENSGAGG00000025305	SRP19	64	76.923	Gopherus_agassizii
ENSCAFG00020004285	-	85	67.368	ENSHBUG00000006131	srp19	64	66.304	Haplochromis_burtoni
ENSCAFG00020004285	-	86	90.625	ENSHGLG00000006075	SRP19	64	90.217	Heterocephalus_glaber_female
ENSCAFG00020004285	-	86	90.625	ENSHGLG00100015859	SRP19	64	90.217	Heterocephalus_glaber_male
ENSCAFG00020004285	-	85	64.211	ENSHCOG00000013231	srp19	65	65.217	Hippocampus_comes
ENSCAFG00020004285	-	84	68.085	ENSIPUG00000025084	srp19	65	67.391	Ictalurus_punctatus
ENSCAFG00020004285	-	86	92.708	ENSSTOG00000000348	SRP19	64	92.391	Ictidomys_tridecemlineatus
ENSCAFG00020004285	-	86	93.750	ENSJJAG00000017185	Srp19	64	93.478	Jaculus_jaculus
ENSCAFG00020004285	-	85	71.579	ENSKMAG00000011155	srp19	65	70.652	Kryptolebias_marmoratus
ENSCAFG00020004285	-	85	69.474	ENSLBEG00000026727	srp19	65	68.478	Labrus_bergylta
ENSCAFG00020004285	-	84	78.723	ENSLACG00000004459	SRP19	60	78.261	Latimeria_chalumnae
ENSCAFG00020004285	-	84	71.277	ENSLOCG00000010302	srp19	65	70.652	Lepisosteus_oculatus
ENSCAFG00020004285	-	86	92.708	ENSLAFG00000002564	SRP19	64	92.391	Loxodonta_africana
ENSCAFG00020004285	-	82	71.739	ENSMFAG00000040055	-	66	71.739	Macaca_fascicularis
ENSCAFG00020004285	-	78	82.955	ENSMFAG00000000554	-	88	77.320	Macaca_fascicularis
ENSCAFG00020004285	-	82	82.609	ENSMMUG00000032515	-	68	82.609	Macaca_mulatta
ENSCAFG00020004285	-	78	82.955	ENSMMUG00000049186	-	61	82.955	Macaca_mulatta
ENSCAFG00020004285	-	82	71.739	ENSMNEG00000040117	-	66	71.739	Macaca_nemestrina
ENSCAFG00020004285	-	86	93.750	ENSMNEG00000038714	SRP19	64	93.478	Macaca_nemestrina
ENSCAFG00020004285	-	85	70.526	ENSMAMG00000018346	srp19	65	69.565	Mastacembelus_armatus
ENSCAFG00020004285	-	85	67.368	ENSMZEG00005001765	srp19	65	66.304	Maylandia_zebra
ENSCAFG00020004285	-	84	79.787	ENSMGAG00000006762	SRP19	70	79.348	Meleagris_gallopavo
ENSCAFG00020004285	-	89	86.000	ENSMICG00000049202	-	89	86.000	Microcebus_murinus
ENSCAFG00020004285	-	86	92.708	ENSMICG00000000399	SRP19	64	92.391	Microcebus_murinus
ENSCAFG00020004285	-	93	86.538	ENSMOCG00000010532	-	88	86.000	Microtus_ochrogaster
ENSCAFG00020004285	-	86	91.667	ENSMOCG00000006534	Srp19	64	91.304	Microtus_ochrogaster
ENSCAFG00020004285	-	85	71.579	ENSMMOG00000010417	srp19	59	70.652	Mola_mola
ENSCAFG00020004285	-	84	91.489	ENSMODG00000013278	SRP19	64	91.304	Monodelphis_domestica
ENSCAFG00020004285	-	89	69.000	ENSMALG00000003858	srp19	75	71.739	Monopterus_albus
ENSCAFG00020004285	-	86	89.583	MGP_CAROLIEiJ_G0022086	Srp19	64	89.130	Mus_caroli
ENSCAFG00020004285	-	86	89.583	ENSMUSG00000014504	Srp19	64	89.130	Mus_musculus
ENSCAFG00020004285	-	86	90.625	MGP_PahariEiJ_G0018820	Srp19	64	90.217	Mus_pahari
ENSCAFG00020004285	-	86	89.583	MGP_SPRETEiJ_G0022998	Srp19	64	89.130	Mus_spretus
ENSCAFG00020004285	-	86	94.792	ENSMPUG00000012695	SRP19	63	94.565	Mustela_putorius_furo
ENSCAFG00020004285	-	86	91.667	ENSMLUG00000014793	-	64	91.304	Myotis_lucifugus
ENSCAFG00020004285	-	84	88.298	ENSMLUG00000024549	-	66	89.130	Myotis_lucifugus
ENSCAFG00020004285	-	86	90.625	ENSNGAG00000003440	-	64	90.217	Nannospalax_galili
ENSCAFG00020004285	-	81	85.714	ENSNGAG00000014524	-	71	85.714	Nannospalax_galili
ENSCAFG00020004285	-	86	85.417	ENSNLEG00000035364	-	84	84.783	Nomascus_leucogenys
ENSCAFG00020004285	-	84	91.489	ENSMEUG00000012529	SRP19	71	91.304	Notamacropus_eugenii
ENSCAFG00020004285	-	82	91.304	ENSOPRG00000010549	SRP19	71	91.304	Ochotona_princeps
ENSCAFG00020004285	-	82	84.783	ENSODEG00000019119	-	64	84.783	Octodon_degus
ENSCAFG00020004285	-	82	80.435	ENSODEG00000013862	-	69	80.435	Octodon_degus
ENSCAFG00020004285	-	93	82.857	ENSODEG00000005538	-	88	83.000	Octodon_degus
ENSCAFG00020004285	-	85	67.368	ENSONIG00000000542	srp19	65	66.304	Oreochromis_niloticus
ENSCAFG00020004285	-	84	79.787	ENSOANG00000011139	SRP19	52	81.319	Ornithorhynchus_anatinus
ENSCAFG00020004285	-	86	89.583	ENSOCUG00000015639	SRP19	63	89.130	Oryctolagus_cuniculus
ENSCAFG00020004285	-	92	66.990	ENSORLG00000028267	srp19	88	66.000	Oryzias_latipes
ENSCAFG00020004285	-	92	66.990	ENSORLG00020015201	srp19	88	66.000	Oryzias_latipes_hni
ENSCAFG00020004285	-	92	66.990	ENSORLG00015007525	srp19	88	66.000	Oryzias_latipes_hsok
ENSCAFG00020004285	-	85	71.579	ENSOMEG00000009178	srp19	65	70.652	Oryzias_melastigma
ENSCAFG00020004285	-	86	93.750	ENSOGAG00000008579	SRP19	64	93.478	Otolemur_garnettii
ENSCAFG00020004285	-	86	92.708	ENSOARG00000016066	SRP19	64	92.391	Ovis_aries
ENSCAFG00020004285	-	93	95.192	ENSPPAG00000037062	SRP19	72	95.192	Pan_paniscus
ENSCAFG00020004285	-	93	96.154	ENSPPRG00000015591	SRP19	72	96.154	Panthera_pardus
ENSCAFG00020004285	-	93	96.154	ENSPTIG00000021474	SRP19	72	96.154	Panthera_tigris_altaica
ENSCAFG00020004285	-	93	95.192	ENSPTRG00000017136	SRP19	72	95.192	Pan_troglodytes
ENSCAFG00020004285	-	86	93.750	ENSPANG00000004370	-	64	93.478	Papio_anubis
ENSCAFG00020004285	-	86	83.333	ENSPANG00000034740	-	65	83.333	Papio_anubis
ENSCAFG00020004285	-	85	66.316	ENSPKIG00000018671	srp19	65	65.217	Paramormyrops_kingsleyae
ENSCAFG00020004285	-	84	76.596	ENSPSIG00000013811	SRP19	69	76.923	Pelodiscus_sinensis
ENSCAFG00020004285	-	85	69.474	ENSPMGG00000015313	srp19	66	68.421	Periophthalmus_magnuspinnatus
ENSCAFG00020004285	-	86	91.667	ENSPEMG00000004412	-	67	91.304	Peromyscus_maniculatus_bairdii
ENSCAFG00020004285	-	86	57.732	ENSPMAG00000002685	srp19	64	59.341	Petromyzon_marinus
ENSCAFG00020004285	-	84	91.489	ENSPCIG00000010250	SRP19	64	91.304	Phascolarctos_cinereus
ENSCAFG00020004285	-	85	69.474	ENSPFOG00000015887	srp19	65	69.565	Poecilia_formosa
ENSCAFG00020004285	-	87	68.367	ENSPLAG00000007784	srp19	87	68.421	Poecilia_latipinna
ENSCAFG00020004285	-	87	68.367	ENSPMEG00000003056	srp19	87	68.421	Poecilia_mexicana
ENSCAFG00020004285	-	85	69.474	ENSPREG00000017307	srp19	64	69.565	Poecilia_reticulata
ENSCAFG00020004285	-	93	95.192	ENSPPYG00000029584	SRP19	71	95.192	Pongo_abelii
ENSCAFG00020004285	-	86	90.625	ENSPCAG00000000228	SRP19	64	90.217	Procavia_capensis
ENSCAFG00020004285	-	93	95.192	ENSPCOG00000023239	SRP19	72	95.192	Propithecus_coquereli
ENSCAFG00020004285	-	86	93.750	ENSPVAG00000004895	SRP19	64	93.478	Pteropus_vampyrus
ENSCAFG00020004285	-	84	64.894	ENSPNAG00000009392	srp19	67	64.130	Pygocentrus_nattereri
ENSCAFG00020004285	-	86	90.625	ENSRNOG00000020204	Srp19	64	90.217	Rattus_norvegicus
ENSCAFG00020004285	-	86	93.750	ENSRBIG00000015627	-	64	93.478	Rhinopithecus_bieti
ENSCAFG00020004285	-	84	81.915	ENSRBIG00000040440	-	87	72.277	Rhinopithecus_bieti
ENSCAFG00020004285	-	86	74.227	ENSRROG00000037316	-	68	73.913	Rhinopithecus_roxellana
ENSCAFG00020004285	-	84	81.915	ENSRROG00000037054	-	88	72.277	Rhinopithecus_roxellana
ENSCAFG00020004285	-	93	76.699	ENSSBOG00000032685	-	87	76.768	Saimiri_boliviensis_boliviensis
ENSCAFG00020004285	-	93	95.192	ENSSBOG00000028071	-	72	95.192	Saimiri_boliviensis_boliviensis
ENSCAFG00020004285	-	85	71.579	ENSSFOG00015022139	srp19	65	70.652	Scleropages_formosus
ENSCAFG00020004285	-	85	66.316	ENSSMAG00000016803	srp19	64	65.217	Scophthalmus_maximus
ENSCAFG00020004285	-	86	70.833	ENSSDUG00000012930	srp19	60	69.892	Seriola_dumerili
ENSCAFG00020004285	-	95	46.226	ENSSLDG00000021916	-	81	50.000	Seriola_lalandi_dorsalis
ENSCAFG00020004285	-	86	93.750	ENSSARG00000000615	SRP19	64	93.478	Sorex_araneus
ENSCAFG00020004285	-	84	82.979	ENSSPUG00000015769	SRP19	63	82.609	Sphenodon_punctatus
ENSCAFG00020004285	-	86	94.792	ENSSSCG00000026230	SRP19	64	94.565	Sus_scrofa
ENSCAFG00020004285	-	84	80.851	ENSTGUG00000001019	SRP19	63	80.435	Taeniopygia_guttata
ENSCAFG00020004285	-	85	69.388	ENSTRUG00000023119	srp19	66	68.421	Takifugu_rubripes
ENSCAFG00020004285	-	85	69.474	ENSTNIG00000018880	srp19	65	68.478	Tetraodon_nigroviridis
ENSCAFG00020004285	-	87	93.878	ENSTTRG00000001690	SRP19	66	93.617	Tursiops_truncatus
ENSCAFG00020004285	-	82	94.565	ENSUAMG00000000111	SRP19	64	94.565	Ursus_americanus
ENSCAFG00020004285	-	86	94.792	ENSUMAG00000016997	SRP19	64	94.565	Ursus_maritimus
ENSCAFG00020004285	-	86	93.750	ENSVPAG00000006001	SRP19	64	93.478	Vicugna_pacos
ENSCAFG00020004285	-	93	90.385	ENSVVUG00000012423	SRP19	99	94.805	Vulpes_vulpes
ENSCAFG00020004285	-	85	64.211	ENSXETG00000011993	srp19	65	63.043	Xenopus_tropicalis
ENSCAFG00020004285	-	85	70.526	ENSXMAG00000029788	srp19	65	69.565	Xiphophorus_maculatus