EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020004890 (Gene tree)
Gene ID: 112668973
Gene Symbol: -
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 22245 bases
Position: chrQKWQ01001844.1:15902254-15924498
Accession: 112668973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020006004	RtcB	PF01139.17	7e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020006947	-	1518	-	ENSCAFP00020006004	505 (aa)	XP_025317415	UPI00004BB634

Gene Model

Click here to download ENSCAFG00020004890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020004890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020004890	-	87	96.364	ENSCAFG00020018953	-	99	96.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020004890	-	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSCAFG00020004890	-	100	94.653	ENSAPOG00000006040	rtcb	100	94.653	Acanthochromis_polyacanthus
ENSCAFG00020004890	-	100	100.000	ENSAMEG00000016152	RTCB	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00020004890	-	100	90.297	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
ENSCAFG00020004890	-	100	94.851	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSCAFG00020004890	-	100	94.851	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
ENSCAFG00020004890	-	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSCAFG00020004890	-	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSCAFG00020004890	-	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSCAFG00020004890	-	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSCAFG00020004890	-	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSCAFG00020004890	-	100	93.267	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSCAFG00020004890	-	100	94.653	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSCAFG00020004890	-	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSCAFG00020004890	-	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSCAFG00020004890	-	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSCAFG00020004890	-	100	100.000	ENSCAFG00000001785	RTCB	100	100.000	Canis_familiaris
ENSCAFG00020004890	-	100	95.644	ENSCAFG00000010789	-	100	95.644	Canis_familiaris
ENSCAFG00020004890	-	100	99.604	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSCAFG00020004890	-	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSCAFG00020004890	-	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSCAFG00020004890	-	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSCAFG00020004890	-	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSCAFG00020004890	-	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSCAFG00020004890	-	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSCAFG00020004890	-	100	85.149	ENSCHOG00000009123	RTCB	100	85.149	Choloepus_hoffmanni
ENSCAFG00020004890	-	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSCAFG00020004890	-	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSCAFG00020004890	-	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSCAFG00020004890	-	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSCAFG00020004890	-	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSCAFG00020004890	-	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSCAFG00020004890	-	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSCAFG00020004890	-	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSCAFG00020004890	-	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSCAFG00020004890	-	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSCAFG00020004890	-	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSCAFG00020004890	-	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSCAFG00020004890	-	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSCAFG00020004890	-	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSCAFG00020004890	-	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSCAFG00020004890	-	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSCAFG00020004890	-	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSCAFG00020004890	-	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSCAFG00020004890	-	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSCAFG00020004890	-	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSCAFG00020004890	-	100	99.604	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSCAFG00020004890	-	100	94.455	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSCAFG00020004890	-	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSCAFG00020004890	-	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSCAFG00020004890	-	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSCAFG00020004890	-	100	93.861	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
ENSCAFG00020004890	-	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSCAFG00020004890	-	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSCAFG00020004890	-	100	93.267	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
ENSCAFG00020004890	-	100	99.604	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSCAFG00020004890	-	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSCAFG00020004890	-	100	99.604	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSCAFG00020004890	-	100	91.519	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSCAFG00020004890	-	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSCAFG00020004890	-	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSCAFG00020004890	-	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSCAFG00020004890	-	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSCAFG00020004890	-	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSCAFG00020004890	-	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSCAFG00020004890	-	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSCAFG00020004890	-	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSCAFG00020004890	-	100	98.614	ENSLAFG00000002082	RTCB	100	98.614	Loxodonta_africana
ENSCAFG00020004890	-	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSCAFG00020004890	-	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSCAFG00020004890	-	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSCAFG00020004890	-	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSCAFG00020004890	-	100	94.455	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
ENSCAFG00020004890	-	100	93.267	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
ENSCAFG00020004890	-	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSCAFG00020004890	-	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCAFG00020004890	-	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSCAFG00020004890	-	100	80.198	ENSMICG00000036677	-	100	80.198	Microcebus_murinus
ENSCAFG00020004890	-	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSCAFG00020004890	-	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSCAFG00020004890	-	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSCAFG00020004890	-	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSCAFG00020004890	-	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSCAFG00020004890	-	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSCAFG00020004890	-	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSCAFG00020004890	-	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSCAFG00020004890	-	100	100.000	ENSMPUG00000012285	RTCB	100	100.000	Mustela_putorius_furo
ENSCAFG00020004890	-	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSCAFG00020004890	-	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSCAFG00020004890	-	100	93.465	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
ENSCAFG00020004890	-	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSCAFG00020004890	-	100	73.069	ENSMEUG00000007809	-	100	73.069	Notamacropus_eugenii
ENSCAFG00020004890	-	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCAFG00020004890	-	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCAFG00020004890	-	100	65.743	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSCAFG00020004890	-	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSCAFG00020004890	-	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSCAFG00020004890	-	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSCAFG00020004890	-	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSCAFG00020004890	-	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSCAFG00020004890	-	100	94.059	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSCAFG00020004890	-	100	93.663	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSCAFG00020004890	-	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSCAFG00020004890	-	100	99.604	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSCAFG00020004890	-	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSCAFG00020004890	-	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSCAFG00020004890	-	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSCAFG00020004890	-	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSCAFG00020004890	-	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSCAFG00020004890	-	100	93.069	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
ENSCAFG00020004890	-	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSCAFG00020004890	-	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSCAFG00020004890	-	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSCAFG00020004890	-	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSCAFG00020004890	-	100	98.614	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
ENSCAFG00020004890	-	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSCAFG00020004890	-	100	95.050	ENSPLAG00000017663	rtcb	100	95.050	Poecilia_latipinna
ENSCAFG00020004890	-	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSCAFG00020004890	-	100	94.851	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSCAFG00020004890	-	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSCAFG00020004890	-	93	81.144	ENSPCAG00000013641	RTCB	100	81.144	Procavia_capensis
ENSCAFG00020004890	-	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSCAFG00020004890	-	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSCAFG00020004890	-	100	93.267	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
ENSCAFG00020004890	-	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSCAFG00020004890	-	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSCAFG00020004890	-	100	90.711	ENSRBIG00000042090	RTCB	100	90.711	Rhinopithecus_bieti
ENSCAFG00020004890	-	100	94.455	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSCAFG00020004890	-	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSCAFG00020004890	-	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSCAFG00020004890	-	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSCAFG00020004890	-	100	90.891	ENSSMAG00000005096	rtcb	100	90.891	Scophthalmus_maximus
ENSCAFG00020004890	-	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSCAFG00020004890	-	100	93.861	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
ENSCAFG00020004890	-	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCAFG00020004890	-	100	96.040	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSCAFG00020004890	-	100	94.851	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
ENSCAFG00020004890	-	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSCAFG00020004890	-	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSCAFG00020004890	-	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSCAFG00020004890	-	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSCAFG00020004890	-	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSCAFG00020004890	-	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSCAFG00020004890	-	100	100.000	ENSUAMG00000022792	RTCB	100	100.000	Ursus_americanus
ENSCAFG00020004890	-	100	100.000	ENSUMAG00000017225	RTCB	100	100.000	Ursus_maritimus
ENSCAFG00020004890	-	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSCAFG00020004890	-	100	100.000	ENSVVUG00000023408	RTCB	100	100.000	Vulpes_vulpes
ENSCAFG00020004890	-	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSCAFG00020004890	-	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus