EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020005274 (Gene tree)
Gene ID: 112648887
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 6020 bases
Position: chrQKWQ01001577.1:38326480-38332499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020006512	G-patch	PF01585.23	2.4e-10	1	1
ENSCAFP00020006518	G-patch	PF01585.23	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020007524	-	387	-	ENSCAFP00020006512	128 (aa)	-	-
ENSCAFT00020007531	-	447	-	ENSCAFP00020006518	148 (aa)	-	-
ENSCAFT00020007509	-	3687	-	ENSCAFP00020006497	390 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020005274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020005274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020005274	-	88	96.429	ENSCAFG00020006707	-	91	96.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020005274	-	95	83.471	ENSG00000160818	GPATCH4	100	83.471	Homo_sapiens
ENSCAFG00020005274	-	96	43.902	ENSACIG00000017309	-	66	57.500	Amphilophus_citrinellus
ENSCAFG00020005274	-	98	46.269	ENSACLG00000010456	gpatch4	51	55.952	Astatotilapia_calliptera
ENSCAFG00020005274	-	81	46.429	ENSAMXG00000034049	gpatch4	61	46.018	Astyanax_mexicanus
ENSCAFG00020005274	-	90	86.087	ENSCJAG00000006048	GPATCH4	94	86.087	Callithrix_jacchus
ENSCAFG00020005274	-	88	75.000	ENSCJAG00000001883	-	91	75.000	Callithrix_jacchus
ENSCAFG00020005274	-	88	82.143	ENSCJAG00000031662	-	78	82.143	Callithrix_jacchus
ENSCAFG00020005274	-	98	82.540	ENSTSYG00000026904	-	89	82.540	Carlito_syrichta
ENSCAFG00020005274	-	87	81.081	ENSCPOG00000013701	-	94	81.250	Cavia_porcellus
ENSCAFG00020005274	-	90	86.087	ENSCCAG00000036114	GPATCH4	94	86.087	Cebus_capucinus
ENSCAFG00020005274	-	100	76.351	ENSCATG00000042152	GPATCH4	100	76.351	Cercocebus_atys
ENSCAFG00020005274	-	100	77.027	ENSCANG00000030031	GPATCH4	100	77.027	Colobus_angolensis_palliatus
ENSCAFG00020005274	-	87	47.059	ENSDARG00000091931	gpatch4	63	46.667	Danio_rerio
ENSCAFG00020005274	-	91	80.172	ENSDORG00000011332	-	78	80.172	Dipodomys_ordii
ENSCAFG00020005274	-	100	77.703	ENSGGOG00000000753	GPATCH4	100	77.703	Gorilla_gorilla
ENSCAFG00020005274	-	98	46.269	ENSHBUG00000009675	gpatch4	50	55.952	Haplochromis_burtoni
ENSCAFG00020005274	-	97	82.258	ENSHGLG00000011346	-	98	82.258	Heterocephalus_glaber_female
ENSCAFG00020005274	-	88	87.500	ENSHGLG00100018277	-	97	73.973	Heterocephalus_glaber_male
ENSCAFG00020005274	-	88	84.821	ENSSTOG00000020510	GPATCH4	85	85.586	Ictidomys_tridecemlineatus
ENSCAFG00020005274	-	100	76.351	ENSMFAG00000030965	GPATCH4	100	76.351	Macaca_fascicularis
ENSCAFG00020005274	-	100	77.027	ENSMMUG00000002624	GPATCH4	100	77.027	Macaca_mulatta
ENSCAFG00020005274	-	100	76.351	ENSMNEG00000028844	GPATCH4	100	76.351	Macaca_nemestrina
ENSCAFG00020005274	-	100	75.676	ENSMLEG00000037909	GPATCH4	100	75.676	Mandrillus_leucophaeus
ENSCAFG00020005274	-	88	85.714	ENSMAUG00000008406	-	93	85.714	Mesocricetus_auratus
ENSCAFG00020005274	-	97	64.516	ENSMICG00000038615	-	91	64.516	Microcebus_murinus
ENSCAFG00020005274	-	88	75.893	ENSMICG00000034025	-	94	75.893	Microcebus_murinus
ENSCAFG00020005274	-	77	79.592	ENSMICG00000047155	-	88	79.592	Microcebus_murinus
ENSCAFG00020005274	-	88	83.036	ENSMOCG00000008875	-	98	83.036	Microtus_ochrogaster
ENSCAFG00020005274	-	98	46.667	ENSMMOG00000017095	gpatch4	76	58.537	Mola_mola
ENSCAFG00020005274	-	87	62.281	ENSMODG00000014154	-	56	62.281	Monodelphis_domestica
ENSCAFG00020005274	-	98	75.397	ENSNGAG00000019958	-	93	75.397	Nannospalax_galili
ENSCAFG00020005274	-	85	80.734	ENSODEG00000005222	-	99	78.947	Octodon_degus
ENSCAFG00020005274	-	91	83.621	ENSODEG00000010437	-	94	84.821	Octodon_degus
ENSCAFG00020005274	-	66	79.762	ENSODEG00000016849	-	75	81.707	Octodon_degus
ENSCAFG00020005274	-	85	47.321	ENSORLG00000016102	-	100	47.321	Oryzias_latipes
ENSCAFG00020005274	-	100	77.703	ENSPPAG00000028364	-	100	77.703	Pan_paniscus
ENSCAFG00020005274	-	88	89.286	ENSPTIG00000006717	GPATCH4	87	84.553	Panthera_tigris_altaica
ENSCAFG00020005274	-	100	77.703	ENSPTRG00000001464	GPATCH4	100	77.703	Pan_troglodytes
ENSCAFG00020005274	-	100	77.027	ENSPANG00000018543	GPATCH4	100	77.027	Papio_anubis
ENSCAFG00020005274	-	87	46.218	ENSPMGG00000019375	-	84	45.833	Periophthalmus_magnuspinnatus
ENSCAFG00020005274	-	91	84.483	ENSPCOG00000023130	-	100	75.000	Propithecus_coquereli
ENSCAFG00020005274	-	88	74.107	ENSPCOG00000013948	-	77	74.775	Propithecus_coquereli
ENSCAFG00020005274	-	100	77.703	ENSRBIG00000005742	GPATCH4	100	77.703	Rhinopithecus_bieti
ENSCAFG00020005274	-	100	77.703	ENSRROG00000044157	GPATCH4	100	77.703	Rhinopithecus_roxellana
ENSCAFG00020005274	-	88	57.143	ENSSPUG00000002674	GPATCH4	50	49.324	Sphenodon_punctatus
ENSCAFG00020005274	-	96	45.113	ENSTRUG00000020638	-	94	45.522	Takifugu_rubripes
ENSCAFG00020005274	-	88	89.286	ENSVVUG00000019904	-	91	89.286	Vulpes_vulpes
ENSCAFG00020005274	-	97	91.129	ENSVVUG00000006004	-	92	91.129	Vulpes_vulpes