EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020005312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2416 bases
Position: chrQKWQ01001345.1:18732292-18734707
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020006551	DEAD	PF00270.29	9.4e-31	1	2
ENSCAFP00020006551	DEAD	PF00270.29	9.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020007570	-	1326	-	ENSCAFP00020006551	441 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020005312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020005312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020005312	-	67	34.663	ENSCAFG00020012019	DDX41	52	34.663
ENSCAFG00020005312	-	78	75.549	ENSCAFG00020002717	-	60	75.758
ENSCAFG00020005312	-	85	41.000	ENSCAFG00020002867	DDX17	88	41.425
ENSCAFG00020005312	-	62	33.333	ENSCAFG00020006612	DDX47	63	32.653
ENSCAFG00020005312	-	66	32.188	ENSCAFG00020025973	-	87	32.188
ENSCAFG00020005312	-	66	31.548	ENSCAFG00020014114	DDX18	57	30.789
ENSCAFG00020005312	-	82	73.890	ENSCAFG00020010029	-	59	74.278
ENSCAFG00020005312	-	64	31.250	ENSCAFG00020006146	EIF4A2	82	31.250
ENSCAFG00020005312	-	71	35.673	ENSCAFG00020024295	DDX4	51	35.673
ENSCAFG00020005312	-	75	31.522	ENSCAFG00020003753	DDX52	60	31.522
ENSCAFG00020005312	-	67	30.915	ENSCAFG00020008253	EIF4A3	75	31.111
ENSCAFG00020005312	-	85	40.247	ENSCAFG00020026563	DDX5	59	41.555

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020005312	-	88	76.961	ENSAMEG00000019953	-	67	77.340	Ailuropoda_melanoleuca
ENSCAFG00020005312	-	82	76.963	ENSBTAG00000046635	-	62	77.165	Bos_taurus
ENSCAFG00020005312	-	82	76.963	ENSCHIG00000020582	-	63	77.165	Capra_hircus
ENSCAFG00020005312	-	82	71.279	ENSCPOG00000013960	-	58	71.654	Cavia_porcellus
ENSCAFG00020005312	-	82	71.990	ENSCLAG00000017424	-	57	72.178	Chinchilla_lanigera
ENSCAFG00020005312	-	82	77.428	ENSEASG00005001728	-	59	77.428	Equus_asinus_asinus
ENSCAFG00020005312	-	82	76.702	ENSECAG00000035665	-	61	76.903	Equus_caballus
ENSCAFG00020005312	-	82	76.702	ENSECAG00000037015	DDX53	61	76.903	Equus_caballus
ENSCAFG00020005312	-	60	69.930	ENSFDAG00000018215	-	62	70.423	Fukomys_damarensis
ENSCAFG00020005312	-	90	64.471	ENSFDAG00000020660	-	81	65.228	Fukomys_damarensis
ENSCAFG00020005312	-	82	78.534	ENSSTOG00000027719	-	51	78.740	Ictidomys_tridecemlineatus
ENSCAFG00020005312	-	82	76.440	ENSLAFG00000011531	-	60	76.640	Loxodonta_africana
ENSCAFG00020005312	-	88	79.361	ENSMPUG00000019441	-	66	79.557	Mustela_putorius_furo
ENSCAFG00020005312	-	82	74.607	ENSMLUG00000022233	-	63	74.607	Myotis_lucifugus
ENSCAFG00020005312	-	82	74.084	ENSMLUG00000022321	-	60	74.278	Myotis_lucifugus
ENSCAFG00020005312	-	82	77.807	ENSOCUG00000004437	-	60	78.215	Oryctolagus_cuniculus
ENSCAFG00020005312	-	82	73.107	ENSOGAG00000026282	-	60	73.491	Otolemur_garnettii
ENSCAFG00020005312	-	82	77.487	ENSOARG00000016525	-	62	77.690	Ovis_aries
ENSCAFG00020005312	-	82	80.940	ENSPPRG00000011327	-	59	81.365	Panthera_pardus
ENSCAFG00020005312	-	82	80.940	ENSPTIG00000001243	-	59	81.365	Panthera_tigris_altaica
ENSCAFG00020005312	-	82	77.487	ENSPVAG00000001484	-	60	77.690	Pteropus_vampyrus
ENSCAFG00020005312	-	82	80.628	ENSSSCG00000012169	-	60	80.840	Sus_scrofa
ENSCAFG00020005312	-	82	73.298	ENSTBEG00000014650	-	60	73.684	Tupaia_belangeri
ENSCAFG00020005312	-	81	70.496	ENSTTRG00000016514	-	60	70.496	Tursiops_truncatus
ENSCAFG00020005312	-	88	81.373	ENSUAMG00000000177	-	64	81.773	Ursus_americanus
ENSCAFG00020005312	-	92	79.577	ENSUMAG00000011448	-	92	78.302	Ursus_maritimus
ENSCAFG00020005312	-	82	79.058	ENSVPAG00000007860	-	61	79.265	Vicugna_pacos
ENSCAFG00020005312	-	88	88.235	ENSVVUG00000012789	-	66	88.235	Vulpes_vulpes