EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020005397 (Gene tree)
Gene ID: 112666593
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 8224 bases
Position: chrQKWQ01000751.1:9196577-9204800
Accession: 112666593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020007260	zf-CCCH	PF00642.24	2.7e-06	1	1
ENSCAFP00020007275	zf-CCCH	PF00642.24	3.2e-06	1	1
ENSCAFP00020007268	zf-CCCH	PF00642.24	3.2e-06	1	1
ENSCAFP00020007263	zf-CCCH	PF00642.24	3.3e-06	1	1
ENSCAFP00020007249	zf-CCCH	PF00642.24	3.4e-06	1	1
ENSCAFP00020007222	zf-CCCH	PF00642.24	3.5e-06	1	1
ENSCAFP00020007249	TRM	PF02005.16	1.5e-149	1	1
ENSCAFP00020007222	TRM	PF02005.16	7.4e-149	1	1
ENSCAFP00020007263	TRM	PF02005.16	2e-140	1	1
ENSCAFP00020007275	TRM	PF02005.16	3.4e-136	1	1
ENSCAFP00020007268	TRM	PF02005.16	5.1e-133	1	1
ENSCAFP00020007260	TRM	PF02005.16	1.8e-121	1	1
ENSCAFP00020007249	Met_10	PF02475.16	1.5e-05	1	1
ENSCAFP00020007268	Met_10	PF02475.16	1.6e-05	1	1
ENSCAFP00020007275	Met_10	PF02475.16	1.6e-05	1	1
ENSCAFP00020007263	Met_10	PF02475.16	1.6e-05	1	1
ENSCAFP00020007222	Met_10	PF02475.16	1.9e-05	1	1
ENSCAFP00020007260	Met_10	PF02475.16	9.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020008408	TRMT1-204	1902	-	ENSCAFP00020007263	633 (aa)	-	-
ENSCAFT00020008364	TRMT1-201	2109	XM_025457730	ENSCAFP00020007222	702 (aa)	XP_025313515	-
ENSCAFT00020008394	TRMT1-202	1902	-	ENSCAFP00020007249	633 (aa)	-	-
ENSCAFT00020008412	TRMT1-205	1887	-	ENSCAFP00020007268	628 (aa)	-	-
ENSCAFT00020008421	TRMT1-206	1839	-	ENSCAFP00020007275	612 (aa)	-	-
ENSCAFT00020008405	TRMT1-203	1926	-	ENSCAFP00020007260	641 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020005397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020005397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020005397	TRMT1	97	90.196	ENSG00000104907	TRMT1	100	91.623	Homo_sapiens
ENSCAFG00020005397	TRMT1	100	90.181	ENSAMEG00000012598	TRMT1	97	92.956	Ailuropoda_melanoleuca
ENSCAFG00020005397	TRMT1	88	59.370	ENSACIG00000018680	trmt1	88	59.370	Amphilophus_citrinellus
ENSCAFG00020005397	TRMT1	89	65.112	ENSAOCG00000006781	trmt1	86	65.517	Amphiprion_ocellaris
ENSCAFG00020005397	TRMT1	89	65.172	ENSAPEG00000007712	trmt1	86	65.577	Amphiprion_percula
ENSCAFG00020005397	TRMT1	94	65.097	ENSATEG00000001872	trmt1	90	65.097	Anabas_testudineus
ENSCAFG00020005397	TRMT1	91	66.497	ENSACAG00000003825	TRMT1	99	64.553	Anolis_carolinensis
ENSCAFG00020005397	TRMT1	98	84.345	ENSANAG00000023016	TRMT1	99	86.201	Aotus_nancymaae
ENSCAFG00020005397	TRMT1	88	65.035	ENSACLG00000010073	trmt1	92	65.035	Astatotilapia_calliptera
ENSCAFG00020005397	TRMT1	88	67.596	ENSAMXG00000012026	trmt1	85	67.652	Astyanax_mexicanus
ENSCAFG00020005397	TRMT1	100	84.894	ENSBTAG00000019325	TRMT1	93	87.768	Bos_taurus
ENSCAFG00020005397	TRMT1	82	40.665	WBGene00006613	trm-1	96	40.665	Caenorhabditis_elegans
ENSCAFG00020005397	TRMT1	98	84.863	ENSCJAG00000004566	TRMT1	99	84.863	Callithrix_jacchus
ENSCAFG00020005397	TRMT1	100	95.619	ENSCAFG00000017070	TRMT1	99	98.092	Canis_familiaris
ENSCAFG00020005397	TRMT1	100	84.615	ENSCHIG00000013569	TRMT1	99	87.615	Capra_hircus
ENSCAFG00020005397	TRMT1	97	84.202	ENSTSYG00000003207	TRMT1	99	84.051	Carlito_syrichta
ENSCAFG00020005397	TRMT1	91	77.379	ENSCAPG00000003355	TRMT1	98	79.925	Cavia_aperea
ENSCAFG00020005397	TRMT1	99	78.440	ENSCPOG00000011754	TRMT1	98	80.982	Cavia_porcellus
ENSCAFG00020005397	TRMT1	97	84.416	ENSCCAG00000022263	TRMT1	99	85.505	Cebus_capucinus
ENSCAFG00020005397	TRMT1	87	73.784	ENSCATG00000038220	-	98	73.784	Cercocebus_atys
ENSCAFG00020005397	TRMT1	100	85.498	ENSCATG00000039850	TRMT1	99	88.092	Cercocebus_atys
ENSCAFG00020005397	TRMT1	98	83.307	ENSCLAG00000015295	TRMT1	99	83.307	Chinchilla_lanigera
ENSCAFG00020005397	TRMT1	76	91.020	ENSCSAG00000006500	TRMT1	100	89.454	Chlorocebus_sabaeus
ENSCAFG00020005397	TRMT1	91	69.712	ENSCPBG00000023866	TRMT1	87	69.966	Chrysemys_picta_bellii
ENSCAFG00020005397	TRMT1	86	45.035	ENSCING00000002884	-	99	45.293	Ciona_intestinalis
ENSCAFG00020005397	TRMT1	84	45.027	ENSCSAVG00000010927	-	100	45.741	Ciona_savignyi
ENSCAFG00020005397	TRMT1	93	70.084	ENSCANG00000031650	-	96	69.771	Colobus_angolensis_palliatus
ENSCAFG00020005397	TRMT1	98	72.640	ENSCANG00000040631	TRMT1	99	72.640	Colobus_angolensis_palliatus
ENSCAFG00020005397	TRMT1	100	82.732	ENSCGRG00001022594	Trmt1	100	82.732	Cricetulus_griseus_chok1gshd
ENSCAFG00020005397	TRMT1	100	82.732	ENSCGRG00000017732	Trmt1	100	82.732	Cricetulus_griseus_crigri
ENSCAFG00020005397	TRMT1	89	65.921	ENSCSEG00000001643	trmt1	84	68.421	Cynoglossus_semilaevis
ENSCAFG00020005397	TRMT1	90	66.384	ENSCVAG00000011886	trmt1	89	65.724	Cyprinodon_variegatus
ENSCAFG00020005397	TRMT1	88	65.285	ENSDARG00000010978	trmt1	85	65.517	Danio_rerio
ENSCAFG00020005397	TRMT1	90	61.181	ENSDNOG00000048240	-	95	61.181	Dasypus_novemcinctus
ENSCAFG00020005397	TRMT1	99	81.920	ENSDORG00000014298	Trmt1	99	81.920	Dipodomys_ordii
ENSCAFG00020005397	TRMT1	83	46.727	FBgn0032430	CG6388	92	46.727	Drosophila_melanogaster
ENSCAFG00020005397	TRMT1	57	82.807	ENSETEG00000015483	-	54	82.807	Echinops_telfairi
ENSCAFG00020005397	TRMT1	88	51.619	ENSEBUG00000003449	trmt1	75	53.908	Eptatretus_burgeri
ENSCAFG00020005397	TRMT1	94	87.356	ENSEASG00005004050	TRMT1	99	87.898	Equus_asinus_asinus
ENSCAFG00020005397	TRMT1	94	87.685	ENSECAG00000016149	TRMT1	99	88.217	Equus_caballus
ENSCAFG00020005397	TRMT1	53	84.921	ENSEEUG00000014102	-	100	70.529	Erinaceus_europaeus
ENSCAFG00020005397	TRMT1	88	64.174	ENSELUG00000021659	trmt1	85	64.696	Esox_lucius
ENSCAFG00020005397	TRMT1	99	93.600	ENSFCAG00000000483	TRMT1	99	93.600	Felis_catus
ENSCAFG00020005397	TRMT1	99	83.886	ENSFDAG00000007386	TRMT1	99	83.886	Fukomys_damarensis
ENSCAFG00020005397	TRMT1	88	66.431	ENSFHEG00000012865	trmt1	88	69.260	Fundulus_heteroclitus
ENSCAFG00020005397	TRMT1	88	60.633	ENSGMOG00000006564	trmt1	98	61.160	Gadus_morhua
ENSCAFG00020005397	TRMT1	89	66.955	ENSGAFG00000011862	trmt1	89	68.116	Gambusia_affinis
ENSCAFG00020005397	TRMT1	90	63.527	ENSGACG00000000227	trmt1	99	61.129	Gasterosteus_aculeatus
ENSCAFG00020005397	TRMT1	91	69.529	ENSGAGG00000016432	TRMT1	87	69.631	Gopherus_agassizii
ENSCAFG00020005397	TRMT1	97	90.359	ENSGGOG00000014007	TRMT1	99	90.080	Gorilla_gorilla
ENSCAFG00020005397	TRMT1	92	56.184	ENSHBUG00000008821	trmt1	97	56.803	Haplochromis_burtoni
ENSCAFG00020005397	TRMT1	99	81.307	ENSHGLG00000015972	TRMT1	99	84.509	Heterocephalus_glaber_female
ENSCAFG00020005397	TRMT1	99	79.014	ENSHGLG00100018112	TRMT1	99	79.014	Heterocephalus_glaber_male
ENSCAFG00020005397	TRMT1	88	63.972	ENSHCOG00000009447	trmt1	88	63.972	Hippocampus_comes
ENSCAFG00020005397	TRMT1	91	63.953	ENSIPUG00000002899	trmt1	86	65.152	Ictalurus_punctatus
ENSCAFG00020005397	TRMT1	100	87.539	ENSSTOG00000012531	TRMT1	100	87.539	Ictidomys_tridecemlineatus
ENSCAFG00020005397	TRMT1	94	83.500	ENSJJAG00000017154	Trmt1	100	81.575	Jaculus_jaculus
ENSCAFG00020005397	TRMT1	88	67.487	ENSKMAG00000011809	trmt1	98	65.085	Kryptolebias_marmoratus
ENSCAFG00020005397	TRMT1	88	67.135	ENSLBEG00000012703	trmt1	84	67.193	Labrus_bergylta
ENSCAFG00020005397	TRMT1	89	57.290	ENSLACG00000014585	TRMT1	99	56.220	Latimeria_chalumnae
ENSCAFG00020005397	TRMT1	89	61.092	ENSLOCG00000006479	trmt1	99	61.724	Lepisosteus_oculatus
ENSCAFG00020005397	TRMT1	98	84.438	ENSLAFG00000014072	TRMT1	100	87.057	Loxodonta_africana
ENSCAFG00020005397	TRMT1	100	85.650	ENSMFAG00000033143	TRMT1	99	88.244	Macaca_fascicularis
ENSCAFG00020005397	TRMT1	99	85.783	ENSMMUG00000001167	TRMT1	99	85.783	Macaca_mulatta
ENSCAFG00020005397	TRMT1	100	85.498	ENSMNEG00000037867	TRMT1	99	88.092	Macaca_nemestrina
ENSCAFG00020005397	TRMT1	99	89.440	ENSMLEG00000016142	TRMT1	99	89.440	Mandrillus_leucophaeus
ENSCAFG00020005397	TRMT1	88	67.368	ENSMAMG00000004357	trmt1	85	67.951	Mastacembelus_armatus
ENSCAFG00020005397	TRMT1	88	65.210	ENSMZEG00005014510	trmt1	85	65.210	Maylandia_zebra
ENSCAFG00020005397	TRMT1	98	82.609	ENSMAUG00000011134	Trmt1	100	81.790	Mesocricetus_auratus
ENSCAFG00020005397	TRMT1	100	84.441	ENSMICG00000000793	TRMT1	99	87.289	Microcebus_murinus
ENSCAFG00020005397	TRMT1	97	79.845	ENSMOCG00000015895	Trmt1	98	81.804	Microtus_ochrogaster
ENSCAFG00020005397	TRMT1	88	66.960	ENSMMOG00000011097	trmt1	92	66.960	Mola_mola
ENSCAFG00020005397	TRMT1	91	76.134	ENSMODG00000011619	TRMT1	99	75.689	Monodelphis_domestica
ENSCAFG00020005397	TRMT1	100	82.418	MGP_CAROLIEiJ_G0031304	Trmt1	100	84.411	Mus_caroli
ENSCAFG00020005397	TRMT1	100	82.418	ENSMUSG00000001909	Trmt1	100	83.650	Mus_musculus
ENSCAFG00020005397	TRMT1	100	82.418	MGP_SPRETEiJ_G0032422	Trmt1	100	83.650	Mus_spretus
ENSCAFG00020005397	TRMT1	100	89.879	ENSMPUG00000004210	TRMT1	94	92.508	Mustela_putorius_furo
ENSCAFG00020005397	TRMT1	100	84.894	ENSMLUG00000012809	TRMT1	97	87.730	Myotis_lucifugus
ENSCAFG00020005397	TRMT1	97	83.442	ENSNGAG00000022486	Trmt1	97	83.442	Nannospalax_galili
ENSCAFG00020005397	TRMT1	77	68.060	ENSNBRG00000024376	trmt1	85	68.060	Neolamprologus_brichardi
ENSCAFG00020005397	TRMT1	82	89.521	ENSNLEG00000013019	-	99	89.521	Nomascus_leucogenys
ENSCAFG00020005397	TRMT1	91	75.085	ENSMEUG00000013756	TRMT1	100	75.544	Notamacropus_eugenii
ENSCAFG00020005397	TRMT1	81	81.614	ENSOPRG00000009471	-	79	87.972	Ochotona_princeps
ENSCAFG00020005397	TRMT1	98	81.902	ENSODEG00000010323	TRMT1	99	84.509	Octodon_degus
ENSCAFG00020005397	TRMT1	89	67.354	ENSONIG00000000400	trmt1	99	64.687	Oreochromis_niloticus
ENSCAFG00020005397	TRMT1	76	89.796	ENSOCUG00000021934	TRMT1	99	88.381	Oryctolagus_cuniculus
ENSCAFG00020005397	TRMT1	94	60.359	ENSORLG00000020074	trmt1	94	60.359	Oryzias_latipes
ENSCAFG00020005397	TRMT1	94	62.623	ENSORLG00020007561	trmt1	94	62.520	Oryzias_latipes_hni
ENSCAFG00020005397	TRMT1	94	63.366	ENSORLG00015006547	trmt1	90	63.366	Oryzias_latipes_hsok
ENSCAFG00020005397	TRMT1	90	65.128	ENSOMEG00000019343	trmt1	88	65.128	Oryzias_melastigma
ENSCAFG00020005397	TRMT1	93	84.909	ENSOGAG00000025576	TRMT1	99	84.102	Otolemur_garnettii
ENSCAFG00020005397	TRMT1	100	76.138	ENSOARG00000009397	TRMT1	94	75.231	Ovis_aries
ENSCAFG00020005397	TRMT1	98	84.912	ENSPPRG00000012117	TRMT1	100	84.912	Panthera_pardus
ENSCAFG00020005397	TRMT1	80	95.166	ENSPTIG00000008833	TRMT1	97	95.166	Panthera_tigris_altaica
ENSCAFG00020005397	TRMT1	97	90.196	ENSPTRG00000010557	TRMT1	99	89.920	Pan_troglodytes
ENSCAFG00020005397	TRMT1	99	69.243	ENSPTRG00000050421	-	96	69.243	Pan_troglodytes
ENSCAFG00020005397	TRMT1	100	89.258	ENSPANG00000009247	TRMT1	100	89.258	Papio_anubis
ENSCAFG00020005397	TRMT1	96	63.166	ENSPANG00000034058	-	94	73.640	Papio_anubis
ENSCAFG00020005397	TRMT1	89	67.876	ENSPKIG00000005309	trmt1	85	67.005	Paramormyrops_kingsleyae
ENSCAFG00020005397	TRMT1	87	59.857	ENSPSIG00000008762	TRMT1	80	60.870	Pelodiscus_sinensis
ENSCAFG00020005397	TRMT1	88	65.789	ENSPMGG00000019764	trmt1	90	65.789	Periophthalmus_magnuspinnatus
ENSCAFG00020005397	TRMT1	97	86.039	ENSPEMG00000016247	Trmt1	100	84.615	Peromyscus_maniculatus_bairdii
ENSCAFG00020005397	TRMT1	89	58.895	ENSPMAG00000004329	trmt1	92	58.475	Petromyzon_marinus
ENSCAFG00020005397	TRMT1	93	74.751	ENSPCIG00000019273	TRMT1	99	73.832	Phascolarctos_cinereus
ENSCAFG00020005397	TRMT1	95	62.282	ENSPFOG00000008527	trmt1	97	64.659	Poecilia_formosa
ENSCAFG00020005397	TRMT1	88	69.489	ENSPLAG00000018788	trmt1	97	66.551	Poecilia_latipinna
ENSCAFG00020005397	TRMT1	88	69.298	ENSPMEG00000013120	trmt1	88	69.352	Poecilia_mexicana
ENSCAFG00020005397	TRMT1	88	67.888	ENSPREG00000000211	trmt1	85	68.348	Poecilia_reticulata
ENSCAFG00020005397	TRMT1	97	86.271	ENSPPYG00000009622	TRMT1	98	89.147	Pongo_abelii
ENSCAFG00020005397	TRMT1	98	76.816	ENSPCAG00000003698	TRMT1	99	79.535	Procavia_capensis
ENSCAFG00020005397	TRMT1	99	89.297	ENSPCOG00000008653	TRMT1	99	89.297	Propithecus_coquereli
ENSCAFG00020005397	TRMT1	99	87.156	ENSPVAG00000015076	TRMT1	98	89.783	Pteropus_vampyrus
ENSCAFG00020005397	TRMT1	88	63.636	ENSPNYG00000013960	trmt1	92	63.700	Pundamilia_nyererei
ENSCAFG00020005397	TRMT1	82	68.632	ENSPNAG00000024859	trmt1	88	68.632	Pygocentrus_nattereri
ENSCAFG00020005397	TRMT1	96	82.268	ENSRNOG00000002914	Trmt1	98	83.280	Rattus_norvegicus
ENSCAFG00020005397	TRMT1	100	85.196	ENSRBIG00000038324	TRMT1	99	87.786	Rhinopithecus_bieti
ENSCAFG00020005397	TRMT1	93	69.421	ENSRBIG00000037505	-	99	67.778	Rhinopithecus_bieti
ENSCAFG00020005397	TRMT1	93	68.595	ENSRROG00000031847	-	98	66.984	Rhinopithecus_roxellana
ENSCAFG00020005397	TRMT1	100	85.045	ENSRROG00000028599	TRMT1	99	87.634	Rhinopithecus_roxellana
ENSCAFG00020005397	TRMT1	79	36.194	YDR120C	-	92	37.196	Saccharomyces_cerevisiae
ENSCAFG00020005397	TRMT1	98	84.109	ENSSBOG00000028861	TRMT1	99	85.179	Saimiri_boliviensis_boliviensis
ENSCAFG00020005397	TRMT1	90	76.752	ENSSHAG00000014381	TRMT1	98	76.277	Sarcophilus_harrisii
ENSCAFG00020005397	TRMT1	89	67.130	ENSSFOG00015004139	trmt1	89	65.620	Scleropages_formosus
ENSCAFG00020005397	TRMT1	89	66.610	ENSSMAG00000021136	trmt1	87	66.610	Scophthalmus_maximus
ENSCAFG00020005397	TRMT1	88	67.719	ENSSDUG00000012740	trmt1	84	67.719	Seriola_dumerili
ENSCAFG00020005397	TRMT1	88	67.368	ENSSLDG00000005971	trmt1	84	67.368	Seriola_lalandi_dorsalis
ENSCAFG00020005397	TRMT1	82	85.444	ENSSARG00000005138	TRMT1	99	84.547	Sorex_araneus
ENSCAFG00020005397	TRMT1	90	54.059	ENSSPUG00000001084	TRMT1	94	53.488	Sphenodon_punctatus
ENSCAFG00020005397	TRMT1	89	64.138	ENSSPAG00000007153	trmt1	95	64.200	Stegastes_partitus
ENSCAFG00020005397	TRMT1	96	89.085	ENSSSCG00000013744	TRMT1	99	90.461	Sus_scrofa
ENSCAFG00020005397	TRMT1	86	63.186	ENSTRUG00000010700	trmt1	89	61.897	Takifugu_rubripes
ENSCAFG00020005397	TRMT1	89	65.398	ENSTNIG00000018808	trmt1	99	65.398	Tetraodon_nigroviridis
ENSCAFG00020005397	TRMT1	100	83.673	ENSTTRG00000006379	TRMT1	98	86.047	Tursiops_truncatus
ENSCAFG00020005397	TRMT1	98	94.695	ENSUAMG00000022911	TRMT1	99	94.695	Ursus_americanus
ENSCAFG00020005397	TRMT1	98	90.723	ENSUMAG00000006027	TRMT1	99	92.846	Ursus_maritimus
ENSCAFG00020005397	TRMT1	100	94.562	ENSVVUG00000024177	TRMT1	99	97.243	Vulpes_vulpes
ENSCAFG00020005397	TRMT1	71	70.870	ENSXETG00000033863	TRMT1	92	70.870	Xenopus_tropicalis
ENSCAFG00020005397	TRMT1	89	66.952	ENSXCOG00000015733	trmt1	90	67.406	Xiphophorus_couchianus
ENSCAFG00020005397	TRMT1	89	67.478	ENSXMAG00000013823	trmt1	98	67.993	Xiphophorus_maculatus