EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020005878 (Gene tree)
Gene ID: 112652498
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 45251 bases
Position: chrQKWQ01000775.1:7652338-7697588
Accession: 112652498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008890	GTP_EFTU	PF00009.27	1.4e-63	1	1
ENSCAFP00020008886	GTP_EFTU	PF00009.27	1.5e-63	1	1
ENSCAFP00020008799	GTP_EFTU	PF00009.27	1.5e-63	1	1
ENSCAFP00020008991	GTP_EFTU	PF00009.27	1.5e-63	1	1
ENSCAFP00020008988	GTP_EFTU	PF00009.27	1.6e-63	1	1
ENSCAFP00020008932	GTP_EFTU	PF00009.27	4e-61	1	1
ENSCAFP00020009078	GTP_EFTU	PF00009.27	1.8e-56	1	1
ENSCAFP00020008890	GTP_EFTU_D2	PF03144.25	6.1e-18	1	1
ENSCAFP00020008799	GTP_EFTU_D2	PF03144.25	6.1e-18	1	1
ENSCAFP00020008991	GTP_EFTU_D2	PF03144.25	6.2e-18	1	1
ENSCAFP00020008932	GTP_EFTU_D2	PF03144.25	6.2e-18	1	1
ENSCAFP00020008886	GTP_EFTU_D2	PF03144.25	6.2e-18	1	1
ENSCAFP00020008988	GTP_EFTU_D2	PF03144.25	6.5e-18	1	1
ENSCAFP00020008932	EFG_IV	PF03764.18	5.4e-35	1	1
ENSCAFP00020008799	EFG_IV	PF03764.18	6.9e-35	1	1
ENSCAFP00020008890	EFG_IV	PF03764.18	6.9e-35	1	1
ENSCAFP00020008991	EFG_IV	PF03764.18	7e-35	1	1
ENSCAFP00020008886	EFG_IV	PF03764.18	7.2e-35	1	1
ENSCAFP00020008988	EFG_IV	PF03764.18	7.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020010544	GFM1-207	750	-	ENSCAFP00020009078	249 (aa)	-	-
ENSCAFT00020010331	GFM1-203	2181	-	ENSCAFP00020008890	726 (aa)	-	-
ENSCAFT00020010439	GFM1-206	2208	-	ENSCAFP00020008991	735 (aa)	-	-
ENSCAFT00020010327	GFM1-202	2211	-	ENSCAFP00020008886	736 (aa)	-	-
ENSCAFT00020010376	GFM1-204	2214	-	ENSCAFP00020008932	737 (aa)	-	-
ENSCAFT00020010227	GFM1-201	2193	-	ENSCAFP00020008799	730 (aa)	-	-
ENSCAFT00020010435	GFM1-205	2501	-	ENSCAFP00020008988	754 (aa)	XP_025291823	UPI000DC68434

Gene Model

Click here to download ENSCAFG00020005878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020005878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020005878	GFM1	60	30.986	ENSCAFG00020009633	EFTUD2	51	30.986
ENSCAFG00020005878	GFM1	60	37.013	ENSCAFG00020003101	GUF1	62	34.392
ENSCAFG00020005878	GFM1	75	38.926	ENSCAFG00020007212	-	73	38.926
ENSCAFG00020005878	GFM1	75	38.926	ENSCAFG00020018386	-	73	38.926
ENSCAFG00020005878	GFM1	95	34.610	ENSCAFG00020016998	GFM2	93	34.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020005878	GFM1	99	93.223	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSCAFG00020005878	GFM1	92	81.016	ENSAPOG00000016489	gfm1	97	80.059	Acanthochromis_polyacanthus
ENSCAFG00020005878	GFM1	99	96.680	ENSAMEG00000013542	GFM1	98	95.399	Ailuropoda_melanoleuca
ENSCAFG00020005878	GFM1	98	77.051	ENSACIG00000014465	gfm1	93	77.051	Amphilophus_citrinellus
ENSCAFG00020005878	GFM1	98	81.206	ENSAOCG00000006023	gfm1	97	79.726	Amphiprion_ocellaris
ENSCAFG00020005878	GFM1	98	81.206	ENSAPEG00000024499	gfm1	98	80.926	Amphiprion_percula
ENSCAFG00020005878	GFM1	98	81.058	ENSATEG00000013789	gfm1	98	79.592	Anabas_testudineus
ENSCAFG00020005878	GFM1	99	83.218	ENSAPLG00000005022	GFM1	100	82.782	Anas_platyrhynchos
ENSCAFG00020005878	GFM1	98	84.123	ENSACAG00000006829	GFM1	99	82.409	Anolis_carolinensis
ENSCAFG00020005878	GFM1	99	92.946	ENSANAG00000035983	GFM1	98	92.381	Aotus_nancymaae
ENSCAFG00020005878	GFM1	98	82.451	ENSACLG00000016586	gfm1	98	80.860	Astatotilapia_calliptera
ENSCAFG00020005878	GFM1	98	81.616	ENSAMXG00000013435	gfm1	98	79.973	Astyanax_mexicanus
ENSCAFG00020005878	GFM1	100	93.899	ENSBTAG00000027795	GFM1	98	94.181	Bos_taurus
ENSCAFG00020005878	GFM1	99	55.451	WBGene00009246	gfm-1	99	55.615	Caenorhabditis_elegans
ENSCAFG00020005878	GFM1	99	93.084	ENSCJAG00000000363	GFM1	98	92.412	Callithrix_jacchus
ENSCAFG00020005878	GFM1	99	99.862	ENSCAFG00000009006	GFM1	100	100.000	Canis_familiaris
ENSCAFG00020005878	GFM1	99	94.890	ENSCHIG00000015220	GFM1	98	94.046	Capra_hircus
ENSCAFG00020005878	GFM1	99	95.574	ENSTSYG00000002013	GFM1	98	94.986	Carlito_syrichta
ENSCAFG00020005878	GFM1	99	81.543	ENSCAPG00000005699	GFM1	98	81.543	Cavia_aperea
ENSCAFG00020005878	GFM1	99	93.499	ENSCPOG00000001194	GFM1	98	92.828	Cavia_porcellus
ENSCAFG00020005878	GFM1	99	92.669	ENSCCAG00000025561	GFM1	98	92.098	Cebus_capucinus
ENSCAFG00020005878	GFM1	99	93.361	ENSCATG00000037622	GFM1	98	92.799	Cercocebus_atys
ENSCAFG00020005878	GFM1	99	92.244	ENSCLAG00000002503	GFM1	98	91.486	Chinchilla_lanigera
ENSCAFG00020005878	GFM1	99	93.361	ENSCSAG00000012162	GFM1	98	92.799	Chlorocebus_sabaeus
ENSCAFG00020005878	GFM1	99	84.371	ENSCHOG00000004867	GFM1	98	83.469	Choloepus_hoffmanni
ENSCAFG00020005878	GFM1	98	84.819	ENSCPBG00000018367	GFM1	99	82.976	Chrysemys_picta_bellii
ENSCAFG00020005878	GFM1	98	59.724	ENSCING00000011960	-	95	58.999	Ciona_intestinalis
ENSCAFG00020005878	GFM1	98	60.194	ENSCSAVG00000008514	-	99	60.194	Ciona_savignyi
ENSCAFG00020005878	GFM1	99	93.499	ENSCANG00000031714	GFM1	98	92.935	Colobus_angolensis_palliatus
ENSCAFG00020005878	GFM1	99	94.751	ENSCGRG00001022095	GFM1	98	94.046	Cricetulus_griseus_chok1gshd
ENSCAFG00020005878	GFM1	99	94.751	ENSCGRG00000012043	GFM1	98	94.046	Cricetulus_griseus_crigri
ENSCAFG00020005878	GFM1	98	77.019	ENSCSEG00000017088	gfm1	98	77.019	Cynoglossus_semilaevis
ENSCAFG00020005878	GFM1	98	83.450	ENSCVAG00000004126	gfm1	99	81.857	Cyprinodon_variegatus
ENSCAFG00020005878	GFM1	98	81.476	ENSDARG00000063624	gfm1	99	79.060	Danio_rerio
ENSCAFG00020005878	GFM1	56	91.443	ENSDNOG00000016385	-	100	91.443	Dasypus_novemcinctus
ENSCAFG00020005878	GFM1	99	91.551	ENSDORG00000014165	Gfm1	98	90.528	Dipodomys_ordii
ENSCAFG00020005878	GFM1	97	67.324	FBgn0263133	mEFG1	95	67.324	Drosophila_melanogaster
ENSCAFG00020005878	GFM1	99	83.196	ENSETEG00000019197	GFM1	98	82.591	Echinops_telfairi
ENSCAFG00020005878	GFM1	92	66.074	ENSEBUG00000012794	gfm1	99	66.074	Eptatretus_burgeri
ENSCAFG00020005878	GFM1	99	70.028	ENSEEUG00000000429	GFM1	99	70.028	Erinaceus_europaeus
ENSCAFG00020005878	GFM1	98	79.248	ENSELUG00000014728	gfm1	98	77.853	Esox_lucius
ENSCAFG00020005878	GFM1	99	96.819	ENSFCAG00000013291	GFM1	98	95.940	Felis_catus
ENSCAFG00020005878	GFM1	93	83.284	ENSFALG00000007619	GFM1	100	83.284	Ficedula_albicollis
ENSCAFG00020005878	GFM1	100	90.716	ENSFDAG00000016559	GFM1	98	91.204	Fukomys_damarensis
ENSCAFG00020005878	GFM1	98	82.173	ENSFHEG00000006091	gfm1	98	80.680	Fundulus_heteroclitus
ENSCAFG00020005878	GFM1	98	78.918	ENSGMOG00000010161	gfm1	99	78.918	Gadus_morhua
ENSCAFG00020005878	GFM1	99	82.778	ENSGALG00000009634	GFM1	99	81.719	Gallus_gallus
ENSCAFG00020005878	GFM1	98	82.730	ENSGAFG00000012527	gfm1	98	81.224	Gambusia_affinis
ENSCAFG00020005878	GFM1	98	80.474	ENSGACG00000009864	gfm1	99	77.912	Gasterosteus_aculeatus
ENSCAFG00020005878	GFM1	84	88.462	ENSGAGG00000002769	-	90	91.878	Gopherus_agassizii
ENSCAFG00020005878	GFM1	99	93.499	ENSGGOG00000003085	GFM1	98	92.935	Gorilla_gorilla
ENSCAFG00020005878	GFM1	98	82.591	ENSHBUG00000002120	gfm1	99	79.813	Haplochromis_burtoni
ENSCAFG00020005878	GFM1	99	92.393	ENSHGLG00000016855	GFM1	98	91.746	Heterocephalus_glaber_female
ENSCAFG00020005878	GFM1	99	92.393	ENSHGLG00100013049	GFM1	98	91.746	Heterocephalus_glaber_male
ENSCAFG00020005878	GFM1	98	81.206	ENSHCOG00000007638	gfm1	97	81.091	Hippocampus_comes
ENSCAFG00020005878	GFM1	98	82.033	ENSIPUG00000005873	gfm1	96	82.033	Ictalurus_punctatus
ENSCAFG00020005878	GFM1	99	93.361	ENSSTOG00000010150	GFM1	98	93.361	Ictidomys_tridecemlineatus
ENSCAFG00020005878	GFM1	99	93.776	ENSJJAG00000016447	Gfm1	98	92.828	Jaculus_jaculus
ENSCAFG00020005878	GFM1	98	80.501	ENSKMAG00000020768	gfm1	98	79.048	Kryptolebias_marmoratus
ENSCAFG00020005878	GFM1	96	80.912	ENSLBEG00000021315	gfm1	100	80.912	Labrus_bergylta
ENSCAFG00020005878	GFM1	99	81.405	ENSLACG00000012295	GFM1	99	80.959	Latimeria_chalumnae
ENSCAFG00020005878	GFM1	98	75.900	ENSLOCG00000003778	gfm1	99	75.900	Lepisosteus_oculatus
ENSCAFG00020005878	GFM1	99	91.148	ENSLAFG00000010945	GFM1	100	89.379	Loxodonta_africana
ENSCAFG00020005878	GFM1	99	93.638	ENSMFAG00000035731	GFM1	98	93.071	Macaca_fascicularis
ENSCAFG00020005878	GFM1	99	93.776	ENSMMUG00000004961	GFM1	98	93.207	Macaca_mulatta
ENSCAFG00020005878	GFM1	99	93.638	ENSMNEG00000033245	GFM1	98	93.071	Macaca_nemestrina
ENSCAFG00020005878	GFM1	100	90.685	ENSMLEG00000030908	GFM1	100	91.117	Mandrillus_leucophaeus
ENSCAFG00020005878	GFM1	98	82.173	ENSMAMG00000011760	gfm1	98	80.680	Mastacembelus_armatus
ENSCAFG00020005878	GFM1	98	82.591	ENSMZEG00005016639	gfm1	99	79.813	Maylandia_zebra
ENSCAFG00020005878	GFM1	99	82.500	ENSMGAG00000010641	GFM1	97	82.500	Meleagris_gallopavo
ENSCAFG00020005878	GFM1	99	95.028	ENSMAUG00000000611	Gfm1	98	94.317	Mesocricetus_auratus
ENSCAFG00020005878	GFM1	99	94.606	ENSMICG00000049086	GFM1	98	93.775	Microcebus_murinus
ENSCAFG00020005878	GFM1	99	93.785	ENSMOCG00000000465	Gfm1	98	93.234	Microtus_ochrogaster
ENSCAFG00020005878	GFM1	98	80.919	ENSMMOG00000012538	gfm1	97	80.919	Mola_mola
ENSCAFG00020005878	GFM1	99	87.500	ENSMODG00000015673	GFM1	98	87.500	Monodelphis_domestica
ENSCAFG00020005878	GFM1	98	81.616	ENSMALG00000012508	gfm1	95	81.616	Monopterus_albus
ENSCAFG00020005878	GFM1	99	93.785	MGP_CAROLIEiJ_G0025052	Gfm1	98	92.963	Mus_caroli
ENSCAFG00020005878	GFM1	99	93.785	ENSMUSG00000027774	Gfm1	98	92.963	Mus_musculus
ENSCAFG00020005878	GFM1	99	93.646	MGP_PahariEiJ_G0026495	Gfm1	98	92.828	Mus_pahari
ENSCAFG00020005878	GFM1	99	93.785	MGP_SPRETEiJ_G0025994	Gfm1	98	92.963	Mus_spretus
ENSCAFG00020005878	GFM1	99	96.957	ENSMPUG00000002859	GFM1	98	96.076	Mustela_putorius_furo
ENSCAFG00020005878	GFM1	100	93.501	ENSMLUG00000000452	GFM1	98	93.911	Myotis_lucifugus
ENSCAFG00020005878	GFM1	99	93.508	ENSNGAG00000012375	Gfm1	98	92.828	Nannospalax_galili
ENSCAFG00020005878	GFM1	98	82.312	ENSNBRG00000004631	gfm1	98	82.312	Neolamprologus_brichardi
ENSCAFG00020005878	GFM1	99	93.776	ENSNLEG00000004176	GFM1	98	93.071	Nomascus_leucogenys
ENSCAFG00020005878	GFM1	86	89.683	ENSMEUG00000007784	GFM1	92	89.683	Notamacropus_eugenii
ENSCAFG00020005878	GFM1	99	92.808	ENSOPRG00000009860	GFM1	99	91.984	Ochotona_princeps
ENSCAFG00020005878	GFM1	99	91.734	ENSODEG00000004316	GFM1	98	92.152	Octodon_degus
ENSCAFG00020005878	GFM1	98	82.591	ENSONIG00000003772	gfm1	99	79.813	Oreochromis_niloticus
ENSCAFG00020005878	GFM1	62	95.484	ENSOANG00000013873	-	86	95.513	Ornithorhynchus_anatinus
ENSCAFG00020005878	GFM1	99	94.077	ENSOCUG00000013561	GFM1	98	93.369	Oryctolagus_cuniculus
ENSCAFG00020005878	GFM1	97	82.228	ENSORLG00000006487	gfm1	100	82.228	Oryzias_latipes
ENSCAFG00020005878	GFM1	98	82.173	ENSORLG00020003362	gfm1	96	82.173	Oryzias_latipes_hni
ENSCAFG00020005878	GFM1	98	81.755	ENSORLG00015005829	gfm1	96	81.755	Oryzias_latipes_hsok
ENSCAFG00020005878	GFM1	98	82.451	ENSOMEG00000012894	gfm1	96	82.451	Oryzias_melastigma
ENSCAFG00020005878	GFM1	99	93.223	ENSOGAG00000008298	GFM1	98	92.558	Otolemur_garnettii
ENSCAFG00020005878	GFM1	99	94.085	ENSOARG00000002409	GFM1	100	94.093	Ovis_aries
ENSCAFG00020005878	GFM1	99	93.499	ENSPPAG00000033881	GFM1	98	92.935	Pan_paniscus
ENSCAFG00020005878	GFM1	99	96.542	ENSPPRG00000009281	GFM1	98	95.670	Panthera_pardus
ENSCAFG00020005878	GFM1	99	96.404	ENSPTIG00000012416	GFM1	98	95.535	Panthera_tigris_altaica
ENSCAFG00020005878	GFM1	99	93.499	ENSPTRG00000015570	GFM1	98	92.935	Pan_troglodytes
ENSCAFG00020005878	GFM1	99	93.499	ENSPANG00000016512	GFM1	98	92.935	Papio_anubis
ENSCAFG00020005878	GFM1	99	82.361	ENSPKIG00000004876	gfm1	96	82.361	Paramormyrops_kingsleyae
ENSCAFG00020005878	GFM1	98	83.844	ENSPSIG00000012567	GFM1	99	82.172	Pelodiscus_sinensis
ENSCAFG00020005878	GFM1	98	79.028	ENSPMGG00000014068	gfm1	99	79.028	Periophthalmus_magnuspinnatus
ENSCAFG00020005878	GFM1	99	94.475	ENSPEMG00000008942	Gfm1	98	93.775	Peromyscus_maniculatus_bairdii
ENSCAFG00020005878	GFM1	85	86.246	ENSPCIG00000020195	GFM1	98	85.103	Phascolarctos_cinereus
ENSCAFG00020005878	GFM1	98	83.148	ENSPFOG00000011022	gfm1	98	81.633	Poecilia_formosa
ENSCAFG00020005878	GFM1	98	82.869	ENSPLAG00000019585	gfm1	98	80.687	Poecilia_latipinna
ENSCAFG00020005878	GFM1	98	83.008	ENSPMEG00000012376	gfm1	98	81.497	Poecilia_mexicana
ENSCAFG00020005878	GFM1	98	82.730	ENSPREG00000001332	gfm1	93	81.224	Poecilia_reticulata
ENSCAFG00020005878	GFM1	99	93.776	ENSPPYG00000014244	GFM1	98	93.207	Pongo_abelii
ENSCAFG00020005878	GFM1	96	89.047	ENSPCAG00000008934	GFM1	100	89.047	Procavia_capensis
ENSCAFG00020005878	GFM1	99	94.882	ENSPCOG00000022259	GFM1	98	94.046	Propithecus_coquereli
ENSCAFG00020005878	GFM1	100	93.634	ENSPVAG00000013605	GFM1	98	93.911	Pteropus_vampyrus
ENSCAFG00020005878	GFM1	98	82.312	ENSPNYG00000006037	gfm1	97	82.312	Pundamilia_nyererei
ENSCAFG00020005878	GFM1	98	82.173	ENSPNAG00000001237	gfm1	97	82.173	Pygocentrus_nattereri
ENSCAFG00020005878	GFM1	99	93.785	ENSRNOG00000012873	Gfm1	98	93.099	Rattus_norvegicus
ENSCAFG00020005878	GFM1	99	93.361	ENSRBIG00000031363	GFM1	98	92.799	Rhinopithecus_bieti
ENSCAFG00020005878	GFM1	99	93.499	ENSRROG00000031081	GFM1	98	92.935	Rhinopithecus_roxellana
ENSCAFG00020005878	GFM1	95	56.835	YLR069C	-	90	56.835	Saccharomyces_cerevisiae
ENSCAFG00020005878	GFM1	99	93.223	ENSSBOG00000023252	GFM1	98	92.663	Saimiri_boliviensis_boliviensis
ENSCAFG00020005878	GFM1	99	88.658	ENSSHAG00000017772	GFM1	97	88.658	Sarcophilus_harrisii
ENSCAFG00020005878	GFM1	99	81.405	ENSSFOG00015003117	gfm1	99	81.405	Scleropages_formosus
ENSCAFG00020005878	GFM1	98	79.805	ENSSMAG00000013221	gfm1	100	77.467	Scophthalmus_maximus
ENSCAFG00020005878	GFM1	98	81.198	ENSSDUG00000018665	gfm1	98	79.728	Seriola_dumerili
ENSCAFG00020005878	GFM1	98	81.198	ENSSLDG00000020606	gfm1	98	79.728	Seriola_lalandi_dorsalis
ENSCAFG00020005878	GFM1	98	81.755	ENSSPUG00000018686	GFM1	99	80.108	Sphenodon_punctatus
ENSCAFG00020005878	GFM1	98	81.198	ENSSPAG00000008800	gfm1	98	79.728	Stegastes_partitus
ENSCAFG00020005878	GFM1	100	93.775	ENSSSCG00000025651	GFM1	98	94.181	Sus_scrofa
ENSCAFG00020005878	GFM1	98	80.362	ENSTRUG00000009244	gfm1	96	80.362	Takifugu_rubripes
ENSCAFG00020005878	GFM1	98	82.033	ENSTNIG00000007729	gfm1	96	82.033	Tetraodon_nigroviridis
ENSCAFG00020005878	GFM1	92	84.296	ENSTBEG00000017404	GFM1	98	78.003	Tupaia_belangeri
ENSCAFG00020005878	GFM1	99	94.613	ENSTTRG00000001735	GFM1	97	93.911	Tursiops_truncatus
ENSCAFG00020005878	GFM1	99	96.957	ENSUAMG00000026381	GFM1	98	95.940	Ursus_americanus
ENSCAFG00020005878	GFM1	99	96.819	ENSUMAG00000011268	GFM1	98	95.805	Ursus_maritimus
ENSCAFG00020005878	GFM1	100	90.584	ENSVPAG00000009444	GFM1	98	90.798	Vicugna_pacos
ENSCAFG00020005878	GFM1	99	99.448	ENSVVUG00000020091	GFM1	100	99.556	Vulpes_vulpes
ENSCAFG00020005878	GFM1	99	84.268	ENSXETG00000032551	GFM1	99	82.314	Xenopus_tropicalis
ENSCAFG00020005878	GFM1	85	87.736	ENSXCOG00000012590	gfm1	88	87.736	Xiphophorus_couchianus
ENSCAFG00020005878	GFM1	98	82.591	ENSXMAG00000000261	gfm1	98	81.088	Xiphophorus_maculatus