EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020006487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 4172 bases
Position: chrQKWQ01000528.1:26706394-26710565
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008015	MMR_HSR1	PF01926.23	4e-05	1	1
ENSCAFP00020008010	MMR_HSR1	PF01926.23	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020009294	-	282	-	ENSCAFP00020008009	93 (aa)	-	-
ENSCAFT00020009295	-	774	-	ENSCAFP00020008010	257 (aa)	-	-
ENSCAFT00020009301	-	846	-	ENSCAFP00020008015	281 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020006487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020006487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020006487	-	74	45.263	ENSCAFG00020006498	GIMAP4	51	46.316
ENSCAFG00020006487	-	80	39.916	ENSCAFG00020006501	GIMAP7	75	39.916
ENSCAFG00020006487	-	88	44.865	ENSCAFG00020006503	GIMAP8	88	44.624
ENSCAFG00020006487	-	74	48.947	ENSCAFG00020006496	-	59	47.664
ENSCAFG00020006487	-	92	45.230	ENSCAFG00020006491	GIMAP2	84	45.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020006487	-	94	63.356	ENSG00000196329	GIMAP5	99	61.889	Homo_sapiens
ENSCAFG00020006487	-	94	63.356	ENSG00000281887	GIMAP1-GIMAP5	83	61.889	Homo_sapiens
ENSCAFG00020006487	-	74	49.474	ENSAPLG00000001066	-	76	50.802	Anas_platyrhynchos
ENSCAFG00020006487	-	72	44.865	ENSACAG00000017193	-	83	44.920	Anolis_carolinensis
ENSCAFG00020006487	-	70	47.692	ENSACAG00000016727	-	70	47.692	Anolis_carolinensis
ENSCAFG00020006487	-	70	49.162	ENSACAG00000016862	-	88	49.724	Anolis_carolinensis
ENSCAFG00020006487	-	73	47.594	ENSACAG00000028535	-	73	47.236	Anolis_carolinensis
ENSCAFG00020006487	-	96	61.409	ENSBTAG00000039588	-	100	61.409	Bos_taurus
ENSCAFG00020006487	-	99	63.312	ENSBTAG00000004894	-	100	63.312	Bos_taurus
ENSCAFG00020006487	-	86	68.919	ENSBTAG00000000715	-	94	56.811	Bos_taurus
ENSCAFG00020006487	-	94	60.959	ENSCJAG00000020126	-	98	60.133	Callithrix_jacchus
ENSCAFG00020006487	-	100	89.968	ENSCAFG00000024817	-	91	89.968	Canis_familiaris
ENSCAFG00020006487	-	99	61.889	ENSCHIG00000000431	-	99	61.889	Capra_hircus
ENSCAFG00020006487	-	94	61.856	ENSCHIG00000020434	-	87	76.503	Capra_hircus
ENSCAFG00020006487	-	95	61.149	ENSCHIG00000013093	-	99	61.149	Capra_hircus
ENSCAFG00020006487	-	95	61.486	ENSCHIG00000000607	-	99	61.486	Capra_hircus
ENSCAFG00020006487	-	96	65.436	ENSTSYG00000010016	-	99	67.114	Carlito_syrichta
ENSCAFG00020006487	-	99	60.065	ENSCAPG00000007631	-	99	60.065	Cavia_aperea
ENSCAFG00020006487	-	99	60.065	ENSCPOG00000003376	-	99	60.065	Cavia_porcellus
ENSCAFG00020006487	-	94	64.041	ENSCCAG00000009203	-	99	62.866	Cebus_capucinus
ENSCAFG00020006487	-	99	61.364	ENSCLAG00000001246	-	99	61.364	Chinchilla_lanigera
ENSCAFG00020006487	-	95	59.542	ENSCLAG00000001322	-	95	57.190	Chinchilla_lanigera
ENSCAFG00020006487	-	94	64.726	ENSCSAG00000006865	-	94	63.518	Chlorocebus_sabaeus
ENSCAFG00020006487	-	92	42.437	ENSCPBG00000005548	-	78	41.702	Chrysemys_picta_bellii
ENSCAFG00020006487	-	94	62.671	ENSCANG00000029802	-	99	61.564	Colobus_angolensis_palliatus
ENSCAFG00020006487	-	99	53.595	ENSCGRG00001024272	-	99	53.595	Cricetulus_griseus_chok1gshd
ENSCAFG00020006487	-	100	56.311	ENSCGRG00001024196	-	100	56.311	Cricetulus_griseus_chok1gshd
ENSCAFG00020006487	-	100	56.311	ENSCGRG00000015177	-	100	56.311	Cricetulus_griseus_crigri
ENSCAFG00020006487	-	99	53.922	ENSCGRG00000014686	-	99	53.922	Cricetulus_griseus_crigri
ENSCAFG00020006487	-	100	69.903	ENSECAG00000029716	-	98	69.903	Equus_caballus
ENSCAFG00020006487	-	100	69.903	ENSECAG00000007663	-	99	69.903	Equus_caballus
ENSCAFG00020006487	-	94	65.529	ENSECAG00000007668	-	100	63.961	Equus_caballus
ENSCAFG00020006487	-	88	53.676	ENSEEUG00000006852	-	99	55.147	Erinaceus_europaeus
ENSCAFG00020006487	-	100	67.314	ENSFCAG00000042622	-	100	67.314	Felis_catus
ENSCAFG00020006487	-	72	39.713	ENSGALG00000045581	-	53	39.713	Gallus_gallus
ENSCAFG00020006487	-	73	47.619	ENSGAGG00000015829	-	94	46.766	Gopherus_agassizii
ENSCAFG00020006487	-	72	45.405	ENSGAGG00000015825	-	72	43.902	Gopherus_agassizii
ENSCAFG00020006487	-	94	62.671	ENSGGOG00000014216	-	99	61.238	Gorilla_gorilla
ENSCAFG00020006487	-	100	59.609	ENSSTOG00000021076	-	100	60.261	Ictidomys_tridecemlineatus
ENSCAFG00020006487	-	75	36.095	ENSKMAG00000007013	-	74	36.257	Kryptolebias_marmoratus
ENSCAFG00020006487	-	94	63.356	ENSMFAG00000044951	-	94	62.215	Macaca_fascicularis
ENSCAFG00020006487	-	94	63.014	ENSMMUG00000001270	-	87	61.889	Macaca_mulatta
ENSCAFG00020006487	-	94	63.014	ENSMNEG00000028821	-	99	61.889	Macaca_nemestrina
ENSCAFG00020006487	-	94	63.356	ENSMLEG00000029622	-	99	62.215	Mandrillus_leucophaeus
ENSCAFG00020006487	-	100	62.821	ENSMICG00000027282	-	100	62.821	Microcebus_murinus
ENSCAFG00020006487	-	94	58.923	ENSMICG00000035983	-	99	58.013	Microcebus_murinus
ENSCAFG00020006487	-	74	71.053	ENSMOCG00000002213	-	95	69.014	Microtus_ochrogaster
ENSCAFG00020006487	-	75	69.430	ENSMOCG00000018608	-	95	54.064	Microtus_ochrogaster
ENSCAFG00020006487	-	98	46.711	ENSMODG00000003669	-	94	46.711	Monodelphis_domestica
ENSCAFG00020006487	-	74	70.526	MGP_CAROLIEiJ_G0028355	Gimap3	92	54.770	Mus_caroli
ENSCAFG00020006487	-	99	53.922	MGP_CAROLIEiJ_G0028354	Gimap5	99	53.922	Mus_caroli
ENSCAFG00020006487	-	75	70.984	ENSMUSG00000039264	Gimap3	92	55.072	Mus_musculus
ENSCAFG00020006487	-	99	54.248	ENSMUSG00000043505	Gimap5	99	54.248	Mus_musculus
ENSCAFG00020006487	-	83	65.421	MGP_PahariEiJ_G0022105	Gimap3	96	53.608	Mus_pahari
ENSCAFG00020006487	-	99	53.268	MGP_PahariEiJ_G0022104	Gimap5	99	53.268	Mus_pahari
ENSCAFG00020006487	-	87	60.294	ENSMLUG00000026545	-	96	56.997	Myotis_lucifugus
ENSCAFG00020006487	-	90	61.649	ENSMLUG00000023466	-	97	61.649	Myotis_lucifugus
ENSCAFG00020006487	-	97	61.333	ENSMLUG00000007287	-	97	61.333	Myotis_lucifugus
ENSCAFG00020006487	-	74	68.229	ENSMLUG00000025954	-	90	73.770	Myotis_lucifugus
ENSCAFG00020006487	-	90	60.507	ENSMLUG00000028966	-	94	58.824	Myotis_lucifugus
ENSCAFG00020006487	-	74	49.741	ENSMLUG00000022809	-	75	48.705	Myotis_lucifugus
ENSCAFG00020006487	-	100	61.039	ENSNGAG00000022013	-	100	61.039	Nannospalax_galili
ENSCAFG00020006487	-	94	58.219	ENSNGAG00000020526	-	98	58.219	Nannospalax_galili
ENSCAFG00020006487	-	94	63.014	ENSNLEG00000003844	-	99	61.564	Nomascus_leucogenys
ENSCAFG00020006487	-	86	48.519	ENSMEUG00000000849	-	99	48.519	Notamacropus_eugenii
ENSCAFG00020006487	-	88	50.182	ENSMEUG00000016596	-	99	50.182	Notamacropus_eugenii
ENSCAFG00020006487	-	91	54.737	ENSODEG00000011306	-	99	53.770	Octodon_degus
ENSCAFG00020006487	-	98	59.272	ENSOCUG00000005976	-	96	59.272	Oryctolagus_cuniculus
ENSCAFG00020006487	-	74	71.579	ENSOCUG00000025892	-	84	70.769	Oryctolagus_cuniculus
ENSCAFG00020006487	-	92	59.233	ENSOGAG00000009145	-	93	59.233	Otolemur_garnettii
ENSCAFG00020006487	-	94	55.822	ENSOARG00000001645	-	98	55.482	Ovis_aries
ENSCAFG00020006487	-	74	69.613	ENSOARG00000001183	-	91	67.005	Ovis_aries
ENSCAFG00020006487	-	99	63.518	ENSOARG00000001589	-	89	63.518	Ovis_aries
ENSCAFG00020006487	-	99	63.518	ENSOARG00000001288	-	99	63.518	Ovis_aries
ENSCAFG00020006487	-	94	63.356	ENSPPAG00000042001	-	99	61.889	Pan_paniscus
ENSCAFG00020006487	-	100	67.314	ENSPPRG00000017393	-	100	67.314	Panthera_pardus
ENSCAFG00020006487	-	100	67.314	ENSPTIG00000012405	-	100	67.314	Panthera_tigris_altaica
ENSCAFG00020006487	-	94	63.014	ENSPTRG00000034465	GIMAP1	99	61.564	Pan_troglodytes
ENSCAFG00020006487	-	94	63.014	ENSPTRG00000028356	-	85	61.564	Pan_troglodytes
ENSCAFG00020006487	-	94	63.699	ENSPANG00000030896	-	99	62.541	Papio_anubis
ENSCAFG00020006487	-	86	47.244	ENSPSIG00000000508	-	98	47.244	Pelodiscus_sinensis
ENSCAFG00020006487	-	74	56.316	ENSPSIG00000013467	-	96	52.294	Pelodiscus_sinensis
ENSCAFG00020006487	-	73	51.337	ENSPSIG00000000573	-	79	51.579	Pelodiscus_sinensis
ENSCAFG00020006487	-	73	47.059	ENSPSIG00000016016	-	60	47.120	Pelodiscus_sinensis
ENSCAFG00020006487	-	72	43.590	ENSPSIG00000006796	-	97	45.500	Pelodiscus_sinensis
ENSCAFG00020006487	-	50	54.264	ENSPSIG00000004906	-	87	54.887	Pelodiscus_sinensis
ENSCAFG00020006487	-	95	58.333	ENSPEMG00000014554	-	100	55.663	Peromyscus_maniculatus_bairdii
ENSCAFG00020006487	-	95	53.618	ENSPEMG00000019236	-	99	53.618	Peromyscus_maniculatus_bairdii
ENSCAFG00020006487	-	89	48.029	ENSPCIG00000008658	-	87	48.029	Phascolarctos_cinereus
ENSCAFG00020006487	-	75	48.969	ENSPCIG00000001766	-	73	47.573	Phascolarctos_cinereus
ENSCAFG00020006487	-	94	62.329	ENSPPYG00000018173	-	92	60.912	Pongo_abelii
ENSCAFG00020006487	-	100	65.705	ENSPCOG00000016811	-	100	65.705	Propithecus_coquereli
ENSCAFG00020006487	-	92	52.778	ENSRNOG00000008416	Gimap5	99	52.769	Rattus_norvegicus
ENSCAFG00020006487	-	94	63.699	ENSRBIG00000035290	-	99	62.866	Rhinopithecus_bieti
ENSCAFG00020006487	-	94	63.699	ENSRROG00000028817	-	94	62.866	Rhinopithecus_roxellana
ENSCAFG00020006487	-	94	59.932	ENSSBOG00000032164	-	99	58.632	Saimiri_boliviensis_boliviensis
ENSCAFG00020006487	-	76	60.204	ENSSHAG00000000843	-	90	56.542	Sarcophilus_harrisii
ENSCAFG00020006487	-	90	55.124	ENSSARG00000004634	-	99	54.698	Sorex_araneus
ENSCAFG00020006487	-	63	52.147	ENSSPUG00000014119	-	76	52.410	Sphenodon_punctatus
ENSCAFG00020006487	-	74	49.215	ENSSPUG00000009833	-	84	45.662	Sphenodon_punctatus
ENSCAFG00020006487	-	80	41.627	ENSSPUG00000009917	-	62	41.262	Sphenodon_punctatus
ENSCAFG00020006487	-	74	53.439	ENSSPUG00000010036	-	65	53.968	Sphenodon_punctatus
ENSCAFG00020006487	-	89	42.205	ENSSPUG00000009848	-	89	42.205	Sphenodon_punctatus
ENSCAFG00020006487	-	74	51.053	ENSSPUG00000010063	-	63	52.459	Sphenodon_punctatus
ENSCAFG00020006487	-	74	51.579	ENSSPUG00000009760	-	90	49.246	Sphenodon_punctatus
ENSCAFG00020006487	-	74	50.262	ENSSPUG00000010046	-	69	49.500	Sphenodon_punctatus
ENSCAFG00020006487	-	80	43.204	ENSSPUG00000009907	-	90	42.365	Sphenodon_punctatus
ENSCAFG00020006487	-	94	58.219	ENSSSCG00000039407	-	98	57.475	Sus_scrofa
ENSCAFG00020006487	-	97	59.801	ENSTBEG00000000035	-	100	59.801	Tupaia_belangeri
ENSCAFG00020006487	-	94	62.457	ENSTTRG00000003204	-	100	62.457	Tursiops_truncatus
ENSCAFG00020006487	-	74	75.132	ENSTTRG00000011008	-	88	70.755	Tursiops_truncatus
ENSCAFG00020006487	-	100	73.226	ENSUMAG00000018133	-	91	73.226	Ursus_maritimus
ENSCAFG00020006487	-	94	60.884	ENSVPAG00000011693	-	99	60.066	Vicugna_pacos