EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020006496 (Gene tree)
Gene ID: 112663960
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 5010 bases
Position: chrQKWQ01000528.1:26750906-26755915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008023	MMR_HSR1	PF01926.23	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020009309	-	1092	-	ENSCAFP00020008023	363 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020006496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020006496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020006496	-	56	40.887	ENSCAFG00020006501	GIMAP7	64	40.887
ENSCAFG00020006496	-	78	40.212	ENSCAFG00020006503	GIMAP8	90	44.041
ENSCAFG00020006496	-	55	46.970	ENSCAFG00020006491	GIMAP2	59	46.970
ENSCAFG00020006496	-	56	39.901	ENSCAFG00020006498	GIMAP4	55	39.901
ENSCAFG00020006496	-	59	47.664	ENSCAFG00020006487	-	74	48.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020006496	-	66	64.730	ENSG00000133561	GIMAP6	78	64.783	Homo_sapiens
ENSCAFG00020006496	-	83	75.748	ENSAMEG00000009802	-	86	75.748	Ailuropoda_melanoleuca
ENSCAFG00020006496	-	67	61.660	ENSANAG00000036674	GIMAP6	86	58.238	Aotus_nancymaae
ENSCAFG00020006496	-	77	56.738	ENSBTAG00000050052	-	82	56.738	Bos_taurus
ENSCAFG00020006496	-	60	64.545	ENSCJAG00000020121	GIMAP6	66	60.417	Callithrix_jacchus
ENSCAFG00020006496	-	75	93.796	ENSCAFG00000024858	-	89	93.796	Canis_familiaris
ENSCAFG00020006496	-	72	63.118	ENSCHIG00000019058	-	81	63.158	Capra_hircus
ENSCAFG00020006496	-	81	59.386	ENSCHIG00000012346	-	86	59.386	Capra_hircus
ENSCAFG00020006496	-	64	59.307	ENSCHIG00000026449	-	75	61.860	Capra_hircus
ENSCAFG00020006496	-	67	62.551	ENSTSYG00000031555	GIMAP6	79	62.931	Carlito_syrichta
ENSCAFG00020006496	-	82	50.836	ENSCPOG00000040378	-	97	50.167	Cavia_porcellus
ENSCAFG00020006496	-	67	63.934	ENSCCAG00000034011	GIMAP6	79	64.224	Cebus_capucinus
ENSCAFG00020006496	-	66	63.900	ENSCATG00000038067	GIMAP6	71	65.217	Cercocebus_atys
ENSCAFG00020006496	-	79	54.355	ENSCLAG00000001242	-	98	54.355	Chinchilla_lanigera
ENSCAFG00020006496	-	66	63.900	ENSCSAG00000006876	GIMAP6	65	65.652	Chlorocebus_sabaeus
ENSCAFG00020006496	-	62	62.500	ENSCANG00000029314	GIMAP6	69	59.524	Colobus_angolensis_palliatus
ENSCAFG00020006496	-	79	52.083	ENSCGRG00001023782	Gimap6	93	52.083	Cricetulus_griseus_chok1gshd
ENSCAFG00020006496	-	79	52.083	ENSCGRG00000014388	Gimap6	93	52.083	Cricetulus_griseus_crigri
ENSCAFG00020006496	-	60	69.444	ENSEASG00005007023	GIMAP6	81	69.444	Equus_asinus_asinus
ENSCAFG00020006496	-	83	64.901	ENSECAG00000003981	GIMAP6	86	64.901	Equus_caballus
ENSCAFG00020006496	-	67	67.480	ENSFCAG00000041878	GIMAP6	79	70.213	Felis_catus
ENSCAFG00020006496	-	56	60.294	ENSFDAG00000013097	-	75	60.000	Fukomys_damarensis
ENSCAFG00020006496	-	72	60.606	ENSGGOG00000000613	-	78	65.217	Gorilla_gorilla
ENSCAFG00020006496	-	82	54.667	ENSHGLG00000012994	GIMAP6	86	55.184	Heterocephalus_glaber_female
ENSCAFG00020006496	-	82	54.667	ENSHGLG00100004910	GIMAP6	86	55.184	Heterocephalus_glaber_male
ENSCAFG00020006496	-	66	64.730	ENSMFAG00000043478	GIMAP6	78	66.087	Macaca_fascicularis
ENSCAFG00020006496	-	66	64.730	ENSMMUG00000047276	GIMAP6	78	66.376	Macaca_mulatta
ENSCAFG00020006496	-	66	64.315	ENSMNEG00000029719	GIMAP6	78	65.652	Macaca_nemestrina
ENSCAFG00020006496	-	61	62.882	ENSMLEG00000029734	GIMAP6	63	63.755	Mandrillus_leucophaeus
ENSCAFG00020006496	-	79	51.568	ENSMAUG00000011214	Gimap6	93	51.568	Mesocricetus_auratus
ENSCAFG00020006496	-	67	56.031	ENSMICG00000033278	-	78	59.244	Microcebus_murinus
ENSCAFG00020006496	-	79	50.515	ENSMOCG00000018308	Gimap6	93	49.828	Microtus_ochrogaster
ENSCAFG00020006496	-	58	50.952	ENSMODG00000029183	-	59	50.952	Monodelphis_domestica
ENSCAFG00020006496	-	79	51.568	MGP_CAROLIEiJ_G0028350	Gimap6	93	51.568	Mus_caroli
ENSCAFG00020006496	-	79	51.220	ENSMUSG00000047867	Gimap6	93	51.220	Mus_musculus
ENSCAFG00020006496	-	79	50.871	MGP_SPRETEiJ_G0029353	Gimap6	93	50.871	Mus_spretus
ENSCAFG00020006496	-	66	61.250	ENSMLUG00000010888	GIMAP6	78	61.572	Myotis_lucifugus
ENSCAFG00020006496	-	73	54.340	ENSNGAG00000009129	Gimap6	86	54.340	Nannospalax_galili
ENSCAFG00020006496	-	58	53.052	ENSMEUG00000003871	-	87	53.052	Notamacropus_eugenii
ENSCAFG00020006496	-	74	55.674	ENSOCUG00000023856	-	75	61.135	Oryctolagus_cuniculus
ENSCAFG00020006496	-	70	58.203	ENSOCUG00000026993	-	75	61.135	Oryctolagus_cuniculus
ENSCAFG00020006496	-	61	59.641	ENSOGAG00000029466	-	78	58.696	Otolemur_garnettii
ENSCAFG00020006496	-	81	59.322	ENSOARG00000001356	-	86	59.322	Ovis_aries
ENSCAFG00020006496	-	66	64.730	ENSPPAG00000033178	GIMAP6	78	64.783	Pan_paniscus
ENSCAFG00020006496	-	66	64.730	ENSPTRG00000045753	-	78	64.783	Pan_troglodytes
ENSCAFG00020006496	-	61	63.319	ENSPTRG00000019860	GIMAP6	63	63.319	Pan_troglodytes
ENSCAFG00020006496	-	67	64.344	ENSPANG00000032121	GIMAP6	79	65.665	Papio_anubis
ENSCAFG00020006496	-	84	48.852	ENSPEMG00000011262	Gimap6	93	50.000	Peromyscus_maniculatus_bairdii
ENSCAFG00020006496	-	56	41.089	ENSPCIG00000016010	-	62	41.089	Phascolarctos_cinereus
ENSCAFG00020006496	-	72	60.227	ENSPPYG00000029783	-	78	64.348	Pongo_abelii
ENSCAFG00020006496	-	64	59.402	ENSPCOG00000027875	-	95	59.641	Propithecus_coquereli
ENSCAFG00020006496	-	66	55.833	ENSRNOG00000033338	Gimap6	78	55.833	Rattus_norvegicus
ENSCAFG00020006496	-	69	62.800	ENSRBIG00000031547	GIMAP6	78	65.217	Rhinopithecus_bieti
ENSCAFG00020006496	-	66	63.900	ENSRROG00000045462	GIMAP6	78	65.217	Rhinopithecus_roxellana
ENSCAFG00020006496	-	67	62.295	ENSSBOG00000022715	GIMAP6	86	59.127	Saimiri_boliviensis_boliviensis
ENSCAFG00020006496	-	62	49.362	ENSSHAG00000000570	-	77	54.106	Sarcophilus_harrisii
ENSCAFG00020006496	-	61	62.273	ENSSARG00000011388	-	81	62.559	Sorex_araneus
ENSCAFG00020006496	-	69	60.400	ENSSARG00000000290	-	77	62.222	Sorex_araneus
ENSCAFG00020006496	-	80	59.450	ENSSSCG00000027196	-	100	58.763	Sus_scrofa
ENSCAFG00020006496	-	61	63.677	ENSTTRG00000017002	-	68	62.069	Tursiops_truncatus
ENSCAFG00020006496	-	80	69.655	ENSUAMG00000003158	-	95	69.204	Ursus_americanus
ENSCAFG00020006496	-	60	76.606	ENSUAMG00000004052	-	73	78.846	Ursus_americanus
ENSCAFG00020006496	-	80	70.345	ENSUAMG00000005395	-	95	69.896	Ursus_americanus
ENSCAFG00020006496	-	60	76.606	ENSUAMG00000002021	-	73	78.846	Ursus_americanus
ENSCAFG00020006496	-	57	77.404	ENSUAMG00000000534	-	73	77.404	Ursus_americanus
ENSCAFG00020006496	-	93	85.632	ENSVVUG00000009155	-	83	86.350	Vulpes_vulpes