EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020006661 (Gene tree)
Gene ID: 112672864
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 81316 bases
Position: chrQKWQ01000452.1:5363645-5444960
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008413	Ago_hook	PF10427.9	4.2e-22	1	1
ENSCAFP00020008444	Ago_hook	PF10427.9	4.2e-22	1	1
ENSCAFP00020008419	Ago_hook	PF10427.9	4.7e-22	1	1
ENSCAFP00020008419	RRM_1	PF00076.22	0.00018	1	1
ENSCAFP00020008413	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020009824	TNRC6C-203	5046	-	ENSCAFP00020008444	1681 (aa)	-	-
ENSCAFT00020009787	TNRC6C-201	5817	-	ENSCAFP00020008413	1938 (aa)	-	-
ENSCAFT00020009794	TNRC6C-202	5700	-	ENSCAFP00020008419	1899 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020006661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020006661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020006661	TNRC6C	93	35.622	ENSCAFG00020002189	TNRC6B	99	34.524
ENSCAFG00020006661	TNRC6C	99	42.496	ENSCAFG00020021160	TNRC6A	98	41.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020006661	TNRC6C	99	91.710	ENSG00000078687	TNRC6C	100	91.302	Homo_sapiens
ENSCAFG00020006661	TNRC6C	80	54.670	ENSAPOG00000019749	tnrc6c1	98	50.027	Acanthochromis_polyacanthus
ENSCAFG00020006661	TNRC6C	100	91.284	ENSAMEG00000013756	TNRC6C	99	94.411	Ailuropoda_melanoleuca
ENSCAFG00020006661	TNRC6C	91	52.563	ENSACIG00000008075	tnrc6c1	90	51.959	Amphilophus_citrinellus
ENSCAFG00020006661	TNRC6C	78	67.305	ENSAOCG00000023968	tnrc6c1	99	47.692	Amphiprion_ocellaris
ENSCAFG00020006661	TNRC6C	80	53.950	ENSAPEG00000009020	tnrc6c1	99	49.419	Amphiprion_percula
ENSCAFG00020006661	TNRC6C	99	85.626	ENSAPLG00000005456	TNRC6C	100	85.633	Anas_platyrhynchos
ENSCAFG00020006661	TNRC6C	99	85.537	ENSACAG00000016198	TNRC6C	98	85.826	Anolis_carolinensis
ENSCAFG00020006661	TNRC6C	99	91.080	ENSANAG00000021554	TNRC6C	100	90.583	Aotus_nancymaae
ENSCAFG00020006661	TNRC6C	93	48.272	ENSACLG00000000424	tnrc6c1	98	52.898	Astatotilapia_calliptera
ENSCAFG00020006661	TNRC6C	100	88.803	ENSBTAG00000018658	TNRC6C	100	89.505	Bos_taurus
ENSCAFG00020006661	TNRC6C	99	91.132	ENSCJAG00000019431	TNRC6C	100	90.642	Callithrix_jacchus
ENSCAFG00020006661	TNRC6C	100	98.351	ENSCAFG00000005224	TNRC6C	100	98.351	Canis_familiaris
ENSCAFG00020006661	TNRC6C	100	88.487	ENSCHIG00000026004	TNRC6C	100	88.142	Capra_hircus
ENSCAFG00020006661	TNRC6C	100	89.166	ENSTSYG00000005403	TNRC6C	100	91.811	Carlito_syrichta
ENSCAFG00020006661	TNRC6C	100	84.012	ENSCAPG00000007307	TNRC6C	99	84.236	Cavia_aperea
ENSCAFG00020006661	TNRC6C	100	88.263	ENSCPOG00000000467	TNRC6C	99	89.163	Cavia_porcellus
ENSCAFG00020006661	TNRC6C	99	91.497	ENSCCAG00000030524	TNRC6C	100	91.239	Cebus_capucinus
ENSCAFG00020006661	TNRC6C	100	90.420	ENSCATG00000033135	TNRC6C	100	91.124	Cercocebus_atys
ENSCAFG00020006661	TNRC6C	100	89.864	ENSCLAG00000011139	TNRC6C	99	89.984	Chinchilla_lanigera
ENSCAFG00020006661	TNRC6C	99	90.923	ENSCSAG00000005167	TNRC6C	99	90.923	Chlorocebus_sabaeus
ENSCAFG00020006661	TNRC6C	71	89.776	ENSCHOG00000000088	TNRC6C	75	88.376	Choloepus_hoffmanni
ENSCAFG00020006661	TNRC6C	100	86.848	ENSCPBG00000027960	TNRC6C	100	87.618	Chrysemys_picta_bellii
ENSCAFG00020006661	TNRC6C	99	91.184	ENSCANG00000041771	TNRC6C	100	90.893	Colobus_angolensis_palliatus
ENSCAFG00020006661	TNRC6C	100	88.128	ENSCGRG00001022686	Tnrc6c	100	88.267	Cricetulus_griseus_chok1gshd
ENSCAFG00020006661	TNRC6C	100	88.211	ENSCGRG00000018041	Tnrc6c	100	88.267	Cricetulus_griseus_crigri
ENSCAFG00020006661	TNRC6C	100	47.619	ENSCSEG00000012744	tnrc6c1	98	46.468	Cynoglossus_semilaevis
ENSCAFG00020006661	TNRC6C	97	52.844	ENSDARG00000076847	tnrc6c1	96	55.134	Danio_rerio
ENSCAFG00020006661	TNRC6C	100	87.203	ENSDNOG00000003247	TNRC6C	99	87.741	Dasypus_novemcinctus
ENSCAFG00020006661	TNRC6C	100	84.956	ENSDORG00000004558	Tnrc6c	100	86.372	Dipodomys_ordii
ENSCAFG00020006661	TNRC6C	90	80.331	ENSETEG00000005527	TNRC6C	90	81.488	Echinops_telfairi
ENSCAFG00020006661	TNRC6C	100	91.869	ENSEASG00005004799	TNRC6C	100	92.617	Equus_asinus_asinus
ENSCAFG00020006661	TNRC6C	100	91.869	ENSECAG00000012486	TNRC6C	99	92.128	Equus_caballus
ENSCAFG00020006661	TNRC6C	96	92.052	ENSEEUG00000010008	TNRC6C	96	92.034	Erinaceus_europaeus
ENSCAFG00020006661	TNRC6C	100	92.836	ENSFCAG00000028358	TNRC6C	100	93.577	Felis_catus
ENSCAFG00020006661	TNRC6C	100	82.860	ENSFALG00000000848	TNRC6C	100	85.367	Ficedula_albicollis
ENSCAFG00020006661	TNRC6C	100	89.389	ENSFDAG00000010368	TNRC6C	99	89.794	Fukomys_damarensis
ENSCAFG00020006661	TNRC6C	100	46.802	ENSFHEG00000002936	tnrc6c1	99	46.584	Fundulus_heteroclitus
ENSCAFG00020006661	TNRC6C	100	86.951	ENSGALG00000001725	TNRC6C	100	87.662	Gallus_gallus
ENSCAFG00020006661	TNRC6C	100	48.333	ENSGAFG00000019019	tnrc6c1	97	49.142	Gambusia_affinis
ENSCAFG00020006661	TNRC6C	80	52.736	ENSGACG00000012320	tnrc6c1	97	48.608	Gasterosteus_aculeatus
ENSCAFG00020006661	TNRC6C	100	86.382	ENSGAGG00000022043	TNRC6C	99	86.858	Gopherus_agassizii
ENSCAFG00020006661	TNRC6C	99	91.032	ENSGGOG00000011304	TNRC6C	100	90.495	Gorilla_gorilla
ENSCAFG00020006661	TNRC6C	97	49.901	ENSHBUG00000010846	tnrc6c1	98	53.057	Haplochromis_burtoni
ENSCAFG00020006661	TNRC6C	100	89.804	ENSHGLG00000004809	TNRC6C	99	89.723	Heterocephalus_glaber_female
ENSCAFG00020006661	TNRC6C	100	88.850	ENSHGLG00100012597	TNRC6C	99	89.936	Heterocephalus_glaber_male
ENSCAFG00020006661	TNRC6C	99	51.992	ENSIPUG00000000818	tnrc6c1	98	52.361	Ictalurus_punctatus
ENSCAFG00020006661	TNRC6C	100	88.692	ENSSTOG00000009101	TNRC6C	99	89.462	Ictidomys_tridecemlineatus
ENSCAFG00020006661	TNRC6C	100	87.205	ENSJJAG00000017055	Tnrc6c	99	87.926	Jaculus_jaculus
ENSCAFG00020006661	TNRC6C	100	47.386	ENSKMAG00000021023	tnrc6c1	97	50.531	Kryptolebias_marmoratus
ENSCAFG00020006661	TNRC6C	100	75.088	ENSLACG00000015283	TNRC6C	99	75.497	Latimeria_chalumnae
ENSCAFG00020006661	TNRC6C	98	70.958	ENSLOCG00000013377	tnrc6c1	98	55.727	Lepisosteus_oculatus
ENSCAFG00020006661	TNRC6C	99	91.253	ENSLAFG00000011122	TNRC6C	99	91.253	Loxodonta_africana
ENSCAFG00020006661	TNRC6C	100	90.479	ENSMFAG00000043943	TNRC6C	100	91.182	Macaca_fascicularis
ENSCAFG00020006661	TNRC6C	100	90.479	ENSMMUG00000011924	TNRC6C	100	91.171	Macaca_mulatta
ENSCAFG00020006661	TNRC6C	100	90.420	ENSMNEG00000030405	TNRC6C	100	91.112	Macaca_nemestrina
ENSCAFG00020006661	TNRC6C	100	90.420	ENSMLEG00000033436	TNRC6C	100	91.124	Mandrillus_leucophaeus
ENSCAFG00020006661	TNRC6C	94	52.122	ENSMAMG00000023613	tnrc6c1	97	51.116	Mastacembelus_armatus
ENSCAFG00020006661	TNRC6C	97	49.769	ENSMZEG00005010920	tnrc6c1	98	52.898	Maylandia_zebra
ENSCAFG00020006661	TNRC6C	99	79.535	ENSMGAG00000003906	TNRC6C	100	79.514	Meleagris_gallopavo
ENSCAFG00020006661	TNRC6C	100	87.205	ENSMAUG00000021618	Tnrc6c	100	88.974	Mesocricetus_auratus
ENSCAFG00020006661	TNRC6C	99	91.497	ENSMICG00000003952	TNRC6C	100	91.009	Microcebus_murinus
ENSCAFG00020006661	TNRC6C	100	89.633	ENSMOCG00000015879	Tnrc6c	99	90.043	Microtus_ochrogaster
ENSCAFG00020006661	TNRC6C	78	54.173	ENSMMOG00000005203	tnrc6c1	97	50.405	Mola_mola
ENSCAFG00020006661	TNRC6C	100	85.798	ENSMODG00000001785	TNRC6C	99	85.950	Monodelphis_domestica
ENSCAFG00020006661	TNRC6C	100	89.396	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	89.742	Mus_caroli
ENSCAFG00020006661	TNRC6C	100	88.922	ENSMUSG00000025571	Tnrc6c	99	89.284	Mus_musculus
ENSCAFG00020006661	TNRC6C	100	89.336	MGP_PahariEiJ_G0018593	Tnrc6c	99	89.742	Mus_pahari
ENSCAFG00020006661	TNRC6C	100	88.981	MGP_SPRETEiJ_G0018309	Tnrc6c	99	89.341	Mus_spretus
ENSCAFG00020006661	TNRC6C	99	93.727	ENSMPUG00000013348	TNRC6C	97	93.623	Mustela_putorius_furo
ENSCAFG00020006661	TNRC6C	100	82.404	ENSMLUG00000014431	TNRC6C	97	82.850	Myotis_lucifugus
ENSCAFG00020006661	TNRC6C	99	89.505	ENSNGAG00000012203	Tnrc6c	99	89.505	Nannospalax_galili
ENSCAFG00020006661	TNRC6C	93	49.127	ENSNBRG00000005344	tnrc6c1	98	53.925	Neolamprologus_brichardi
ENSCAFG00020006661	TNRC6C	99	89.340	ENSNLEG00000000047	TNRC6C	99	89.184	Nomascus_leucogenys
ENSCAFG00020006661	TNRC6C	97	79.636	ENSMEUG00000005104	TNRC6C	99	89.062	Notamacropus_eugenii
ENSCAFG00020006661	TNRC6C	100	89.567	ENSODEG00000012499	TNRC6C	100	90.501	Octodon_degus
ENSCAFG00020006661	TNRC6C	100	49.714	ENSONIG00000002210	tnrc6c1	96	55.065	Oreochromis_niloticus
ENSCAFG00020006661	TNRC6C	99	63.349	ENSOANG00000009758	-	100	62.559	Ornithorhynchus_anatinus
ENSCAFG00020006661	TNRC6C	100	48.195	ENSORLG00000009837	tnrc6c1	100	68.401	Oryzias_latipes
ENSCAFG00020006661	TNRC6C	100	48.278	ENSORLG00020016510	tnrc6c1	97	48.966	Oryzias_latipes_hni
ENSCAFG00020006661	TNRC6C	81	44.260	ENSORLG00015000171	tnrc6c1	94	44.877	Oryzias_latipes_hsok
ENSCAFG00020006661	TNRC6C	100	46.975	ENSOMEG00000000357	tnrc6c1	99	46.984	Oryzias_melastigma
ENSCAFG00020006661	TNRC6C	100	87.138	ENSOGAG00000007197	TNRC6C	100	89.850	Otolemur_garnettii
ENSCAFG00020006661	TNRC6C	95	86.033	ENSOARG00000006041	TNRC6C	97	86.087	Ovis_aries
ENSCAFG00020006661	TNRC6C	99	91.601	ENSPPAG00000027160	TNRC6C	100	91.182	Pan_paniscus
ENSCAFG00020006661	TNRC6C	100	92.895	ENSPPRG00000018881	TNRC6C	100	93.636	Panthera_pardus
ENSCAFG00020006661	TNRC6C	90	86.900	ENSPTIG00000008791	TNRC6C	91	86.757	Panthera_tigris_altaica
ENSCAFG00020006661	TNRC6C	99	91.601	ENSPTRG00000009699	TNRC6C	100	91.182	Pan_troglodytes
ENSCAFG00020006661	TNRC6C	100	90.640	ENSPANG00000019994	TNRC6C	100	91.333	Papio_anubis
ENSCAFG00020006661	TNRC6C	96	51.354	ENSPKIG00000005428	tnrc6c1	98	51.705	Paramormyrops_kingsleyae
ENSCAFG00020006661	TNRC6C	100	84.665	ENSPSIG00000018069	TNRC6C	99	85.510	Pelodiscus_sinensis
ENSCAFG00020006661	TNRC6C	65	54.762	ENSPMGG00000022911	tnrc6c1	97	63.158	Periophthalmus_magnuspinnatus
ENSCAFG00020006661	TNRC6C	100	88.915	ENSPEMG00000009785	Tnrc6c	99	89.510	Peromyscus_maniculatus_bairdii
ENSCAFG00020006661	TNRC6C	58	85.832	ENSPCIG00000017421	-	99	85.832	Phascolarctos_cinereus
ENSCAFG00020006661	TNRC6C	100	48.195	ENSPFOG00000012560	tnrc6c1	98	53.582	Poecilia_formosa
ENSCAFG00020006661	TNRC6C	97	49.390	ENSPLAG00000021055	tnrc6c1	97	50.634	Poecilia_latipinna
ENSCAFG00020006661	TNRC6C	99	91.549	ENSPPYG00000008679	TNRC6C	97	91.549	Pongo_abelii
ENSCAFG00020006661	TNRC6C	93	89.336	ENSPCAG00000012510	TNRC6C	94	93.839	Procavia_capensis
ENSCAFG00020006661	TNRC6C	100	91.307	ENSPCOG00000021451	TNRC6C	100	91.995	Propithecus_coquereli
ENSCAFG00020006661	TNRC6C	96	94.915	ENSPVAG00000002008	TNRC6C	95	94.915	Pteropus_vampyrus
ENSCAFG00020006661	TNRC6C	96	50.068	ENSPNYG00000014477	tnrc6c1	98	52.465	Pundamilia_nyererei
ENSCAFG00020006661	TNRC6C	100	88.639	ENSRNOG00000022395	Tnrc6c	100	89.282	Rattus_norvegicus
ENSCAFG00020006661	TNRC6C	100	90.361	ENSRBIG00000027777	TNRC6C	100	91.066	Rhinopithecus_bieti
ENSCAFG00020006661	TNRC6C	100	90.420	ENSRROG00000042912	TNRC6C	100	91.124	Rhinopithecus_roxellana
ENSCAFG00020006661	TNRC6C	99	90.715	ENSSBOG00000023981	TNRC6C	100	90.432	Saimiri_boliviensis_boliviensis
ENSCAFG00020006661	TNRC6C	52	84.615	ENSSHAG00000018330	-	100	88.400	Sarcophilus_harrisii
ENSCAFG00020006661	TNRC6C	80	56.348	ENSSFOG00015004735	-	99	60.995	Scleropages_formosus
ENSCAFG00020006661	TNRC6C	92	57.163	ENSSFOG00015006475	tnrc6c1	98	51.947	Scleropages_formosus
ENSCAFG00020006661	TNRC6C	100	48.091	ENSSMAG00000012761	tnrc6c1	99	50.604	Scophthalmus_maximus
ENSCAFG00020006661	TNRC6C	100	50.285	ENSSDUG00000002366	tnrc6c1	99	50.781	Seriola_dumerili
ENSCAFG00020006661	TNRC6C	100	48.364	ENSSLDG00000025613	tnrc6c1	97	50.057	Seriola_lalandi_dorsalis
ENSCAFG00020006661	TNRC6C	91	94.118	ENSSARG00000006816	TNRC6C	91	94.118	Sorex_araneus
ENSCAFG00020006661	TNRC6C	80	86.727	ENSSPUG00000007341	TNRC6C	98	86.727	Sphenodon_punctatus
ENSCAFG00020006661	TNRC6C	78	53.083	ENSSPAG00000014977	tnrc6c1	98	47.349	Stegastes_partitus
ENSCAFG00020006661	TNRC6C	100	86.299	ENSSSCG00000034373	TNRC6C	100	93.008	Sus_scrofa
ENSCAFG00020006661	TNRC6C	100	86.568	ENSTGUG00000007733	TNRC6C	99	87.636	Taeniopygia_guttata
ENSCAFG00020006661	TNRC6C	78	52.505	ENSTRUG00000011685	tnrc6c1	97	49.376	Takifugu_rubripes
ENSCAFG00020006661	TNRC6C	88	54.598	ENSTNIG00000005273	tnrc6c1	100	60.756	Tetraodon_nigroviridis
ENSCAFG00020006661	TNRC6C	62	88.546	ENSTBEG00000005046	TNRC6C	95	89.453	Tupaia_belangeri
ENSCAFG00020006661	TNRC6C	100	91.237	ENSTTRG00000010828	TNRC6C	99	91.867	Tursiops_truncatus
ENSCAFG00020006661	TNRC6C	99	95.820	ENSUMAG00000013614	TNRC6C	99	95.820	Ursus_maritimus
ENSCAFG00020006661	TNRC6C	52	83.657	ENSVPAG00000006765	-	100	83.657	Vicugna_pacos
ENSCAFG00020006661	TNRC6C	100	98.457	ENSVVUG00000015268	TNRC6C	100	99.173	Vulpes_vulpes
ENSCAFG00020006661	TNRC6C	100	74.089	ENSXETG00000019470	tnrc6c	100	73.987	Xenopus_tropicalis
ENSCAFG00020006661	TNRC6C	100	49.942	ENSXMAG00000025971	tnrc6c1	99	50.000	Xiphophorus_maculatus