EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020006829 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1509 bases
Position: chrQKWQ01002315.1:56136-57644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008403	zf-C3HC	PF07967.13	9.7e-36	1	1
ENSCAFP00020008403	Rsm1	PF08600.10	2.9e-15	1	2
ENSCAFP00020008403	Rsm1	PF08600.10	2.9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020009773	-	1509	-	ENSCAFP00020008403	502 (aa)	-	UPI00005A1B21

Gene Model

Click here to download ENSCAFG00020006829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020006829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020006829	-	100	97.817	ENSCAFG00020023333	-	100	97.817

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020006829	-	99	92.814	ENSG00000091732	ZC3HC1	99	92.814	Homo_sapiens
ENSCAFG00020006829	-	95	44.444	ENSAPOG00000009078	zc3hc1	95	44.242	Acanthochromis_polyacanthus
ENSCAFG00020006829	-	100	93.452	ENSAMEG00000005425	ZC3HC1	100	93.452	Ailuropoda_melanoleuca
ENSCAFG00020006829	-	95	43.030	ENSACIG00000019513	zc3hc1	95	42.857	Amphilophus_citrinellus
ENSCAFG00020006829	-	95	45.253	ENSAOCG00000024310	zc3hc1	95	45.051	Amphiprion_ocellaris
ENSCAFG00020006829	-	95	45.253	ENSAPEG00000004907	zc3hc1	95	45.051	Amphiprion_percula
ENSCAFG00020006829	-	81	48.113	ENSATEG00000016898	zc3hc1	85	47.887	Anabas_testudineus
ENSCAFG00020006829	-	88	60.899	ENSAPLG00000003832	ZC3HC1	99	60.899	Anas_platyrhynchos
ENSCAFG00020006829	-	100	60.577	ENSACAG00000001638	ZC3HC1	100	60.577	Anolis_carolinensis
ENSCAFG00020006829	-	100	90.258	ENSANAG00000022213	ZC3HC1	100	90.258	Aotus_nancymaae
ENSCAFG00020006829	-	88	44.111	ENSACLG00000025033	zc3hc1	98	43.897	Astatotilapia_calliptera
ENSCAFG00020006829	-	94	42.946	ENSAMXG00000036792	zc3hc1	97	42.739	Astyanax_mexicanus
ENSCAFG00020006829	-	100	90.637	ENSBTAG00000011247	ZC3HC1	100	90.637	Bos_taurus
ENSCAFG00020006829	-	100	90.637	ENSCJAG00000010536	ZC3HC1	100	90.637	Callithrix_jacchus
ENSCAFG00020006829	-	100	99.801	ENSCAFG00000029401	-	99	99.801	Canis_familiaris
ENSCAFG00020006829	-	100	98.812	ENSCAFG00000001499	-	99	98.812	Canis_familiaris
ENSCAFG00020006829	-	100	99.801	ENSCAFG00000031850	-	100	99.801	Canis_familiaris
ENSCAFG00020006829	-	100	99.801	ENSCAFG00000028735	-	100	99.801	Canis_familiaris
ENSCAFG00020006829	-	100	84.462	ENSCHIG00000014103	ZC3HC1	100	84.462	Capra_hircus
ENSCAFG00020006829	-	100	88.645	ENSTSYG00000002843	ZC3HC1	100	88.645	Carlito_syrichta
ENSCAFG00020006829	-	90	63.816	ENSCAPG00000016300	ZC3HC1	93	75.000	Cavia_aperea
ENSCAFG00020006829	-	100	84.861	ENSCPOG00000014034	ZC3HC1	100	84.462	Cavia_porcellus
ENSCAFG00020006829	-	100	73.904	ENSCCAG00000020384	ZC3HC1	100	90.749	Cebus_capucinus
ENSCAFG00020006829	-	100	92.629	ENSCATG00000023130	ZC3HC1	100	92.629	Cercocebus_atys
ENSCAFG00020006829	-	100	60.956	ENSCLAG00000008260	ZC3HC1	100	60.835	Chinchilla_lanigera
ENSCAFG00020006829	-	73	92.077	ENSCSAG00000009881	ZC3HC1	97	92.077	Chlorocebus_sabaeus
ENSCAFG00020006829	-	90	90.466	ENSCHOG00000011846	ZC3HC1	99	90.466	Choloepus_hoffmanni
ENSCAFG00020006829	-	96	69.136	ENSCPBG00000017519	ZC3HC1	100	68.254	Chrysemys_picta_bellii
ENSCAFG00020006829	-	100	92.430	ENSCANG00000029091	ZC3HC1	100	92.430	Colobus_angolensis_palliatus
ENSCAFG00020006829	-	100	88.247	ENSCGRG00001018805	Zc3hc1	100	88.247	Cricetulus_griseus_chok1gshd
ENSCAFG00020006829	-	100	87.052	ENSCGRG00000017114	Zc3hc1	100	87.052	Cricetulus_griseus_crigri
ENSCAFG00020006829	-	96	43.000	ENSCSEG00000009284	zc3hc1	94	42.800	Cynoglossus_semilaevis
ENSCAFG00020006829	-	94	42.828	ENSCVAG00000011566	zc3hc1	94	42.623	Cyprinodon_variegatus
ENSCAFG00020006829	-	95	47.347	ENSDARG00000062651	zc3hc1	95	47.347	Danio_rerio
ENSCAFG00020006829	-	100	89.442	ENSDNOG00000045016	ZC3HC1	100	89.442	Dasypus_novemcinctus
ENSCAFG00020006829	-	100	79.482	ENSDORG00000008697	Zc3hc1	100	79.482	Dipodomys_ordii
ENSCAFG00020006829	-	90	92.257	ENSEASG00005008789	ZC3HC1	97	92.257	Equus_asinus_asinus
ENSCAFG00020006829	-	100	91.650	ENSECAG00000017886	ZC3HC1	100	91.650	Equus_caballus
ENSCAFG00020006829	-	84	82.716	ENSEEUG00000003123	ZC3HC1	84	82.716	Erinaceus_europaeus
ENSCAFG00020006829	-	94	43.813	ENSELUG00000023168	zc3hc1	98	43.798	Esox_lucius
ENSCAFG00020006829	-	100	93.227	ENSFCAG00000010429	ZC3HC1	100	93.227	Felis_catus
ENSCAFG00020006829	-	90	59.829	ENSFALG00000005006	ZC3HC1	100	59.829	Ficedula_albicollis
ENSCAFG00020006829	-	100	86.853	ENSFDAG00000019897	ZC3HC1	100	86.853	Fukomys_damarensis
ENSCAFG00020006829	-	96	42.857	ENSFHEG00000020149	zc3hc1	96	42.308	Fundulus_heteroclitus
ENSCAFG00020006829	-	94	41.667	ENSGMOG00000002914	zc3hc1	95	41.788	Gadus_morhua
ENSCAFG00020006829	-	99	61.554	ENSGALG00000008003	ZC3HC1	99	61.554	Gallus_gallus
ENSCAFG00020006829	-	96	43.952	ENSGAFG00000016095	zc3hc1	96	43.775	Gambusia_affinis
ENSCAFG00020006829	-	94	45.062	ENSGACG00000019706	zc3hc1	94	45.082	Gasterosteus_aculeatus
ENSCAFG00020006829	-	77	70.588	ENSGAGG00000016106	ZC3HC1	100	70.588	Gopherus_agassizii
ENSCAFG00020006829	-	99	92.615	ENSGGOG00000015504	ZC3HC1	99	92.615	Gorilla_gorilla
ENSCAFG00020006829	-	94	43.354	ENSHBUG00000008347	zc3hc1	94	43.149	Haplochromis_burtoni
ENSCAFG00020006829	-	100	88.247	ENSHGLG00000005085	ZC3HC1	100	88.247	Heterocephalus_glaber_female
ENSCAFG00020006829	-	100	88.048	ENSHGLG00100011395	ZC3HC1	100	88.048	Heterocephalus_glaber_male
ENSCAFG00020006829	-	95	43.182	ENSHCOG00000014309	zc3hc1	95	42.887	Hippocampus_comes
ENSCAFG00020006829	-	100	89.841	ENSSTOG00000023599	-	100	89.841	Ictidomys_tridecemlineatus
ENSCAFG00020006829	-	94	44.785	ENSKMAG00000015315	zc3hc1	88	44.376	Kryptolebias_marmoratus
ENSCAFG00020006829	-	95	44.311	ENSLBEG00000017325	zc3hc1	95	43.825	Labrus_bergylta
ENSCAFG00020006829	-	78	55.474	ENSLACG00000013032	ZC3HC1	97	54.015	Latimeria_chalumnae
ENSCAFG00020006829	-	99	51.479	ENSLOCG00000015963	zc3hc1	99	51.969	Lepisosteus_oculatus
ENSCAFG00020006829	-	100	88.933	ENSLAFG00000001292	ZC3HC1	100	88.933	Loxodonta_africana
ENSCAFG00020006829	-	100	92.829	ENSMFAG00000030176	ZC3HC1	100	92.829	Macaca_fascicularis
ENSCAFG00020006829	-	100	91.849	ENSMMUG00000006155	ZC3HC1	100	91.849	Macaca_mulatta
ENSCAFG00020006829	-	100	93.028	ENSMNEG00000011833	ZC3HC1	100	93.028	Macaca_nemestrina
ENSCAFG00020006829	-	100	92.829	ENSMLEG00000027328	ZC3HC1	100	92.829	Mandrillus_leucophaeus
ENSCAFG00020006829	-	95	44.758	ENSMAMG00000010691	zc3hc1	95	44.578	Mastacembelus_armatus
ENSCAFG00020006829	-	94	43.149	ENSMZEG00005007142	zc3hc1	94	42.945	Maylandia_zebra
ENSCAFG00020006829	-	99	60.470	ENSMGAG00000002977	ZC3HC1	99	61.057	Meleagris_gallopavo
ENSCAFG00020006829	-	82	82.169	ENSMAUG00000017032	Zc3hc1	92	82.169	Mesocricetus_auratus
ENSCAFG00020006829	-	100	90.837	ENSMICG00000009167	ZC3HC1	100	90.837	Microcebus_murinus
ENSCAFG00020006829	-	100	87.450	ENSMOCG00000015239	Zc3hc1	100	87.450	Microtus_ochrogaster
ENSCAFG00020006829	-	85	43.459	ENSMMOG00000002204	zc3hc1	99	43.202	Mola_mola
ENSCAFG00020006829	-	100	64.231	ENSMODG00000014630	ZC3HC1	100	64.231	Monodelphis_domestica
ENSCAFG00020006829	-	94	43.469	ENSMALG00000014447	zc3hc1	95	44.000	Monopterus_albus
ENSCAFG00020006829	-	100	87.450	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	87.450	Mus_caroli
ENSCAFG00020006829	-	100	86.853	ENSMUSG00000039130	Zc3hc1	100	86.853	Mus_musculus
ENSCAFG00020006829	-	100	81.076	MGP_PahariEiJ_G0021941	Zc3hc1	100	81.076	Mus_pahari
ENSCAFG00020006829	-	100	86.853	MGP_SPRETEiJ_G0029183	Zc3hc1	100	86.853	Mus_spretus
ENSCAFG00020006829	-	95	93.946	ENSMPUG00000005297	ZC3HC1	95	93.946	Mustela_putorius_furo
ENSCAFG00020006829	-	67	85.131	ENSMLUG00000029228	-	99	85.131	Myotis_lucifugus
ENSCAFG00020006829	-	100	90.297	ENSMLUG00000000063	-	100	90.297	Myotis_lucifugus
ENSCAFG00020006829	-	100	88.072	ENSNGAG00000019014	Zc3hc1	100	88.072	Nannospalax_galili
ENSCAFG00020006829	-	94	43.238	ENSNBRG00000004577	zc3hc1	94	43.033	Neolamprologus_brichardi
ENSCAFG00020006829	-	99	91.218	ENSNLEG00000012698	ZC3HC1	99	91.218	Nomascus_leucogenys
ENSCAFG00020006829	-	98	79.150	ENSMEUG00000011023	ZC3HC1	98	79.150	Notamacropus_eugenii
ENSCAFG00020006829	-	65	81.008	ENSOPRG00000007867	-	67	81.008	Ochotona_princeps
ENSCAFG00020006829	-	100	84.462	ENSODEG00000014604	ZC3HC1	100	84.831	Octodon_degus
ENSCAFG00020006829	-	94	43.558	ENSONIG00000011644	zc3hc1	94	43.354	Oreochromis_niloticus
ENSCAFG00020006829	-	90	68.750	ENSOANG00000011460	ZC3HC1	100	68.750	Ornithorhynchus_anatinus
ENSCAFG00020006829	-	100	85.347	ENSOCUG00000017137	ZC3HC1	100	85.347	Oryctolagus_cuniculus
ENSCAFG00020006829	-	95	43.496	ENSORLG00000014409	zc3hc1	94	43.496	Oryzias_latipes
ENSCAFG00020006829	-	95	43.293	ENSORLG00020015874	zc3hc1	94	43.293	Oryzias_latipes_hni
ENSCAFG00020006829	-	95	42.886	ENSORLG00015014641	zc3hc1	94	42.886	Oryzias_latipes_hsok
ENSCAFG00020006829	-	95	45.021	ENSOMEG00000020604	zc3hc1	95	44.969	Oryzias_melastigma
ENSCAFG00020006829	-	95	45.021	ENSOMEG00000000215	zc3hc1	95	44.969	Oryzias_melastigma
ENSCAFG00020006829	-	100	85.259	ENSOGAG00000026193	ZC3HC1	100	85.259	Otolemur_garnettii
ENSCAFG00020006829	-	100	90.891	ENSOARG00000004907	ZC3HC1	99	90.891	Ovis_aries
ENSCAFG00020006829	-	99	92.814	ENSPPAG00000043172	ZC3HC1	99	92.814	Pan_paniscus
ENSCAFG00020006829	-	100	92.629	ENSPPRG00000001004	ZC3HC1	100	92.629	Panthera_pardus
ENSCAFG00020006829	-	100	93.227	ENSPTIG00000007823	ZC3HC1	100	93.227	Panthera_tigris_altaica
ENSCAFG00020006829	-	99	92.415	ENSPTRG00000019685	ZC3HC1	99	92.415	Pan_troglodytes
ENSCAFG00020006829	-	100	91.451	ENSPANG00000014229	ZC3HC1	100	91.451	Papio_anubis
ENSCAFG00020006829	-	95	48.441	ENSPKIG00000007172	zc3hc1	95	48.441	Paramormyrops_kingsleyae
ENSCAFG00020006829	-	93	63.466	ENSPSIG00000016646	ZC3HC1	100	61.014	Pelodiscus_sinensis
ENSCAFG00020006829	-	94	41.129	ENSPMGG00000003548	zc3hc1	95	41.532	Periophthalmus_magnuspinnatus
ENSCAFG00020006829	-	100	88.247	ENSPEMG00000000514	Zc3hc1	100	88.247	Peromyscus_maniculatus_bairdii
ENSCAFG00020006829	-	99	75.649	ENSPCIG00000020619	ZC3HC1	100	78.920	Phascolarctos_cinereus
ENSCAFG00020006829	-	96	43.750	ENSPFOG00000003466	zc3hc1	96	43.574	Poecilia_formosa
ENSCAFG00020006829	-	96	43.347	ENSPLAG00000022211	zc3hc1	96	43.173	Poecilia_latipinna
ENSCAFG00020006829	-	96	43.750	ENSPMEG00000001458	zc3hc1	96	43.574	Poecilia_mexicana
ENSCAFG00020006829	-	96	43.548	ENSPREG00000004004	zc3hc1	96	43.373	Poecilia_reticulata
ENSCAFG00020006829	-	99	84.891	ENSPPYG00000017998	ZC3HC1	99	84.891	Pongo_abelii
ENSCAFG00020006829	-	92	85.000	ENSPCAG00000001182	ZC3HC1	100	85.000	Procavia_capensis
ENSCAFG00020006829	-	100	91.833	ENSPCOG00000017354	ZC3HC1	100	91.833	Propithecus_coquereli
ENSCAFG00020006829	-	100	84.661	ENSPVAG00000003195	ZC3HC1	100	84.661	Pteropus_vampyrus
ENSCAFG00020006829	-	94	43.149	ENSPNYG00000020692	zc3hc1	94	42.945	Pundamilia_nyererei
ENSCAFG00020006829	-	93	44.538	ENSPNAG00000020746	zc3hc1	95	44.118	Pygocentrus_nattereri
ENSCAFG00020006829	-	100	86.680	ENSRNOG00000010154	Zc3hc1	100	86.680	Rattus_norvegicus
ENSCAFG00020006829	-	90	92.715	ENSRBIG00000029409	ZC3HC1	100	92.715	Rhinopithecus_bieti
ENSCAFG00020006829	-	100	92.430	ENSRROG00000041831	ZC3HC1	100	92.430	Rhinopithecus_roxellana
ENSCAFG00020006829	-	88	89.706	ENSSBOG00000032787	ZC3HC1	100	89.706	Saimiri_boliviensis_boliviensis
ENSCAFG00020006829	-	92	78.710	ENSSHAG00000002529	ZC3HC1	100	78.710	Sarcophilus_harrisii
ENSCAFG00020006829	-	95	49.080	ENSSFOG00015003667	zc3hc1	91	47.755	Scleropages_formosus
ENSCAFG00020006829	-	95	44.040	ENSSMAG00000000647	zc3hc1	86	44.646	Scophthalmus_maximus
ENSCAFG00020006829	-	95	45.418	ENSSDUG00000004241	zc3hc1	93	45.233	Seriola_dumerili
ENSCAFG00020006829	-	95	45.214	ENSSLDG00000025056	zc3hc1	93	45.030	Seriola_lalandi_dorsalis
ENSCAFG00020006829	-	99	80.439	ENSSARG00000012013	ZC3HC1	99	80.439	Sorex_araneus
ENSCAFG00020006829	-	86	58.447	ENSSPUG00000000778	ZC3HC1	86	58.447	Sphenodon_punctatus
ENSCAFG00020006829	-	95	45.639	ENSSPAG00000020041	zc3hc1	95	45.455	Stegastes_partitus
ENSCAFG00020006829	-	100	90.239	ENSSSCG00000016565	ZC3HC1	100	90.239	Sus_scrofa
ENSCAFG00020006829	-	95	42.276	ENSTRUG00000020077	zc3hc1	95	42.073	Takifugu_rubripes
ENSCAFG00020006829	-	95	42.418	ENSTNIG00000007585	zc3hc1	99	42.505	Tetraodon_nigroviridis
ENSCAFG00020006829	-	99	80.439	ENSTBEG00000005216	ZC3HC1	99	80.439	Tupaia_belangeri
ENSCAFG00020006829	-	95	91.042	ENSTTRG00000008458	ZC3HC1	100	91.042	Tursiops_truncatus
ENSCAFG00020006829	-	100	94.223	ENSUAMG00000020249	ZC3HC1	100	94.223	Ursus_americanus
ENSCAFG00020006829	-	100	93.625	ENSUMAG00000009268	ZC3HC1	100	93.625	Ursus_maritimus
ENSCAFG00020006829	-	78	94.000	ENSVPAG00000010846	ZC3HC1	77	94.000	Vicugna_pacos
ENSCAFG00020006829	-	96	98.958	ENSVVUG00000012386	ZC3HC1	99	98.958	Vulpes_vulpes
ENSCAFG00020006829	-	91	52.790	ENSXETG00000033900	zc3hc1	95	52.790	Xenopus_tropicalis
ENSCAFG00020006829	-	96	43.232	ENSXCOG00000013570	zc3hc1	96	43.058	Xiphophorus_couchianus
ENSCAFG00020006829	-	88	45.098	ENSXMAG00000010979	zc3hc1	95	44.902	Xiphophorus_maculatus