EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020006938 (Gene tree)
Gene ID: 112665312
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 13292 bases
Position: chrQKWQ01001844.1:1124825-1138116
Accession: 112665312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020008528	MMR_HSR1	PF01926.23	3.6e-05	1	1
ENSCAFP00020008530	MMR_HSR1	PF01926.23	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020009919	-	933	-	ENSCAFP00020008528	223 (aa)	XP_025310764	UPI000DC68DD2
ENSCAFT00020009921	-	969	XM_025454957	ENSCAFP00020008530	235 (aa)	XP_025310742	UPI000DC67183

Gene Model

Click here to download ENSCAFG00020006938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020006938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020006938	-	67	36.601	ENSCAFG00020013537	RAB5C	71	36.601
ENSCAFG00020006938	-	69	35.849	ENSCAFG00020023721	RAB12	56	35.366
ENSCAFG00020006938	-	69	31.013	ENSCAFG00020006179	RAB25	74	31.013
ENSCAFG00020006938	-	71	33.735	ENSCAFG00020004847	RAB7A	80	33.735
ENSCAFG00020006938	-	65	38.926	ENSCAFG00020003253	RAB18	72	38.926
ENSCAFG00020006938	-	67	36.601	ENSCAFG00020027287	RAB5A	71	36.601
ENSCAFG00020006938	-	67	37.255	ENSCAFG00020026971	RAB1A	75	37.255
ENSCAFG00020006938	-	69	31.902	ENSCAFG00020008673	RAB39B	75	31.902
ENSCAFG00020006938	-	69	36.478	ENSCAFG00020022184	RAB11B	72	36.478
ENSCAFG00020006938	-	69	32.544	ENSCAFG00020022020	RAB22A	86	32.544
ENSCAFG00020006938	-	53	34.454	ENSCAFG00020006867	RAB15	51	34.454
ENSCAFG00020006938	-	67	37.255	ENSCAFG00020026094	RAB5B	71	37.255
ENSCAFG00020006938	-	65	31.333	ENSCAFG00020008087	MRAS	77	32.298
ENSCAFG00020006938	-	76	31.395	ENSCAFG00020018913	RAB35	86	31.395
ENSCAFG00020006938	-	67	30.719	ENSCAFG00020002206	RAB6A	74	30.719
ENSCAFG00020006938	-	63	36.076	ENSCAFG00020001403	RAB33A	67	36.076
ENSCAFG00020006938	-	67	37.419	ENSCAFG00020008478	RAB11A	71	37.419
ENSCAFG00020006938	-	66	34.437	ENSCAFG00020021797	-	69	34.437
ENSCAFG00020006938	-	67	34.000	ENSCAFG00020003142	-	69	34.000
ENSCAFG00020006938	-	76	32.759	ENSCAFG00020017865	RAB30	86	32.759
ENSCAFG00020006938	-	70	34.118	ENSCAFG00020020861	RAB33B	73	34.118
ENSCAFG00020006938	-	67	37.908	ENSCAFG00020015406	-	76	37.908
ENSCAFG00020006938	-	77	32.967	ENSCAFG00020002812	RAB9A	88	32.967
ENSCAFG00020006938	-	67	32.026	ENSCAFG00020027569	RAB6B	74	32.026
ENSCAFG00020006938	-	69	34.810	ENSCAFG00020009287	RAB14	73	34.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020006938	-	99	89.140	ENSG00000079974	RABL2B	100	91.919	Homo_sapiens
ENSCAFG00020006938	-	99	89.140	ENSG00000144134	RABL2A	100	92.105	Homo_sapiens
ENSCAFG00020006938	-	99	74.091	ENSAPOG00000023708	rabl2	99	74.091	Acanthochromis_polyacanthus
ENSCAFG00020006938	-	100	91.630	ENSAMEG00000003173	-	100	91.630	Ailuropoda_melanoleuca
ENSCAFG00020006938	-	99	72.727	ENSACIG00000000670	rabl2	99	72.727	Amphilophus_citrinellus
ENSCAFG00020006938	-	99	74.545	ENSAOCG00000008069	rabl2	99	74.545	Amphiprion_ocellaris
ENSCAFG00020006938	-	99	73.636	ENSAPEG00000003164	rabl2	99	73.636	Amphiprion_percula
ENSCAFG00020006938	-	99	74.545	ENSATEG00000001111	rabl2	99	74.545	Anabas_testudineus
ENSCAFG00020006938	-	74	86.585	ENSACAG00000000418	-	93	86.585	Anolis_carolinensis
ENSCAFG00020006938	-	99	88.688	ENSANAG00000021001	-	97	88.688	Aotus_nancymaae
ENSCAFG00020006938	-	99	74.661	ENSACLG00000025632	rabl2	99	74.661	Astatotilapia_calliptera
ENSCAFG00020006938	-	96	77.934	ENSAMXG00000040611	rabl2	96	77.934	Astyanax_mexicanus
ENSCAFG00020006938	-	100	87.168	ENSBTAG00000004876	RABL2B	100	87.611	Bos_taurus
ENSCAFG00020006938	-	99	90.950	ENSCJAG00000018414	-	97	90.950	Callithrix_jacchus
ENSCAFG00020006938	-	100	85.281	ENSCHIG00000000591	-	100	85.714	Capra_hircus
ENSCAFG00020006938	-	99	86.425	ENSTSYG00000004323	-	97	86.425	Carlito_syrichta
ENSCAFG00020006938	-	97	90.278	ENSCPOG00000026899	-	97	90.278	Cavia_porcellus
ENSCAFG00020006938	-	99	90.045	ENSCCAG00000025944	-	97	90.045	Cebus_capucinus
ENSCAFG00020006938	-	99	88.688	ENSCATG00000034307	-	97	88.688	Cercocebus_atys
ENSCAFG00020006938	-	99	89.593	ENSCLAG00000017218	-	99	89.593	Chinchilla_lanigera
ENSCAFG00020006938	-	100	87.444	ENSCSAG00000004698	-	97	87.444	Chlorocebus_sabaeus
ENSCAFG00020006938	-	95	81.132	ENSCPBG00000011715	-	94	81.132	Chrysemys_picta_bellii
ENSCAFG00020006938	-	84	66.489	ENSCING00000004961	-	87	66.489	Ciona_intestinalis
ENSCAFG00020006938	-	81	68.333	ENSCSAVG00000006042	-	87	68.333	Ciona_savignyi
ENSCAFG00020006938	-	99	88.235	ENSCANG00000030879	-	97	88.235	Colobus_angolensis_palliatus
ENSCAFG00020006938	-	100	91.480	ENSCGRG00001021894	Rabl2	100	91.480	Cricetulus_griseus_chok1gshd
ENSCAFG00020006938	-	91	75.369	ENSCSEG00000005479	rabl2	96	73.611	Cynoglossus_semilaevis
ENSCAFG00020006938	-	95	75.829	ENSCVAG00000011432	rabl2	96	75.829	Cyprinodon_variegatus
ENSCAFG00020006938	-	99	73.182	ENSDARG00000063321	rabl2	99	73.182	Danio_rerio
ENSCAFG00020006938	-	99	92.793	ENSDNOG00000035151	-	99	92.793	Dasypus_novemcinctus
ENSCAFG00020006938	-	100	89.686	ENSDORG00000000003	Rabl2	100	89.686	Dipodomys_ordii
ENSCAFG00020006938	-	100	91.928	ENSEASG00005008239	-	100	91.928	Equus_asinus_asinus
ENSCAFG00020006938	-	100	91.480	ENSECAG00000026942	-	100	91.480	Equus_caballus
ENSCAFG00020006938	-	100	95.516	ENSFCAG00000033642	-	100	95.516	Felis_catus
ENSCAFG00020006938	-	100	88.341	ENSFDAG00000002113	-	100	88.341	Fukomys_damarensis
ENSCAFG00020006938	-	99	74.091	ENSFHEG00000015015	rabl2	83	74.091	Fundulus_heteroclitus
ENSCAFG00020006938	-	88	75.127	ENSGMOG00000018928	rabl2	100	75.127	Gadus_morhua
ENSCAFG00020006938	-	92	81.068	ENSGALG00000032458	RABL2B	92	81.068	Gallus_gallus
ENSCAFG00020006938	-	95	76.303	ENSGAFG00000005188	rabl2	95	76.303	Gambusia_affinis
ENSCAFG00020006938	-	99	73.182	ENSGACG00000012474	rabl2	99	73.182	Gasterosteus_aculeatus
ENSCAFG00020006938	-	99	74.661	ENSHBUG00000010964	rabl2	99	74.661	Haplochromis_burtoni
ENSCAFG00020006938	-	100	90.135	ENSHGLG00000005750	-	100	90.135	Heterocephalus_glaber_female
ENSCAFG00020006938	-	100	90.135	ENSHGLG00100016281	-	100	90.135	Heterocephalus_glaber_male
ENSCAFG00020006938	-	100	91.480	ENSSTOG00000002723	-	100	91.480	Ictidomys_tridecemlineatus
ENSCAFG00020006938	-	100	89.238	ENSJJAG00000010792	Rabl2	100	89.238	Jaculus_jaculus
ENSCAFG00020006938	-	99	74.545	ENSKMAG00000012723	rabl2	99	74.545	Kryptolebias_marmoratus
ENSCAFG00020006938	-	99	74.545	ENSLBEG00000003644	rabl2	99	74.545	Labrus_bergylta
ENSCAFG00020006938	-	99	75.225	ENSLACG00000003722	rabl2	99	75.225	Latimeria_chalumnae
ENSCAFG00020006938	-	92	80.097	ENSLOCG00000016767	rabl2	91	80.097	Lepisosteus_oculatus
ENSCAFG00020006938	-	99	89.140	ENSMFAG00000044775	-	97	89.140	Macaca_fascicularis
ENSCAFG00020006938	-	99	89.140	ENSMMUG00000022914	RABL2B	97	89.140	Macaca_mulatta
ENSCAFG00020006938	-	99	88.688	ENSMNEG00000028460	-	96	88.688	Macaca_nemestrina
ENSCAFG00020006938	-	99	88.688	ENSMLEG00000032621	-	96	88.688	Mandrillus_leucophaeus
ENSCAFG00020006938	-	99	74.545	ENSMAMG00000008168	rabl2	99	74.545	Mastacembelus_armatus
ENSCAFG00020006938	-	93	75.481	ENSMZEG00005019758	rabl2	96	75.481	Maylandia_zebra
ENSCAFG00020006938	-	99	89.189	ENSMAUG00000010955	Rabl2	100	89.189	Mesocricetus_auratus
ENSCAFG00020006938	-	99	95.023	ENSMICG00000031301	-	97	95.023	Microcebus_murinus
ENSCAFG00020006938	-	99	90.090	ENSMOCG00000002775	Rabl2	99	90.090	Microtus_ochrogaster
ENSCAFG00020006938	-	96	85.981	ENSMODG00000010838	-	98	85.981	Monodelphis_domestica
ENSCAFG00020006938	-	99	73.636	ENSMALG00000005944	rabl2	99	73.636	Monopterus_albus
ENSCAFG00020006938	-	100	87.892	MGP_CAROLIEiJ_G0020176	Rabl2	99	87.892	Mus_caroli
ENSCAFG00020006938	-	100	87.892	ENSMUSG00000022621	Rabl2	100	87.892	Mus_musculus
ENSCAFG00020006938	-	100	88.789	MGP_PahariEiJ_G0020181	Rabl2	100	88.789	Mus_pahari
ENSCAFG00020006938	-	100	87.892	MGP_SPRETEiJ_G0021073	Rabl2	100	87.892	Mus_spretus
ENSCAFG00020006938	-	100	94.170	ENSMPUG00000001806	-	100	94.170	Mustela_putorius_furo
ENSCAFG00020006938	-	99	86.937	ENSNGAG00000012843	Rabl2	96	86.937	Nannospalax_galili
ENSCAFG00020006938	-	99	74.661	ENSNBRG00000000489	rabl2	99	74.661	Neolamprologus_brichardi
ENSCAFG00020006938	-	99	89.140	ENSNLEG00000030435	-	96	89.140	Nomascus_leucogenys
ENSCAFG00020006938	-	100	87.892	ENSODEG00000015650	-	100	87.892	Octodon_degus
ENSCAFG00020006938	-	99	75.113	ENSONIG00000014885	rabl2	99	75.113	Oreochromis_niloticus
ENSCAFG00020006938	-	93	74.038	ENSORLG00000009874	rabl2	92	74.038	Oryzias_latipes
ENSCAFG00020006938	-	93	74.038	ENSORLG00020001721	rabl2	92	74.038	Oryzias_latipes_hni
ENSCAFG00020006938	-	93	74.038	ENSORLG00015014268	rabl2	92	74.038	Oryzias_latipes_hsok
ENSCAFG00020006938	-	93	75.481	ENSOMEG00000008576	rabl2	96	75.481	Oryzias_melastigma
ENSCAFG00020006938	-	99	93.213	ENSOGAG00000009123	-	97	93.213	Otolemur_garnettii
ENSCAFG00020006938	-	100	92.444	ENSPPRG00000014642	-	99	92.444	Panthera_pardus
ENSCAFG00020006938	-	100	95.516	ENSPTIG00000018747	-	100	95.516	Panthera_tigris_altaica
ENSCAFG00020006938	-	99	84.848	ENSPTRG00000014555	-	97	84.848	Pan_troglodytes
ENSCAFG00020006938	-	99	84.348	ENSPANG00000036121	-	96	84.348	Papio_anubis
ENSCAFG00020006938	-	92	79.126	ENSPKIG00000025372	rabl2	92	79.126	Paramormyrops_kingsleyae
ENSCAFG00020006938	-	96	81.776	ENSPSIG00000014041	-	95	81.776	Pelodiscus_sinensis
ENSCAFG00020006938	-	88	76.650	ENSPMGG00000012946	rabl2	96	76.768	Periophthalmus_magnuspinnatus
ENSCAFG00020006938	-	100	90.135	ENSPEMG00000024045	Rabl2	100	90.135	Peromyscus_maniculatus_bairdii
ENSCAFG00020006938	-	96	83.182	ENSPCIG00000012436	-	91	83.182	Phascolarctos_cinereus
ENSCAFG00020006938	-	94	76.303	ENSPFOG00000017960	rabl2	95	76.303	Poecilia_formosa
ENSCAFG00020006938	-	94	77.033	ENSPLAG00000015685	rabl2	95	77.033	Poecilia_latipinna
ENSCAFG00020006938	-	94	77.033	ENSPMEG00000004703	rabl2	95	77.033	Poecilia_mexicana
ENSCAFG00020006938	-	87	78.351	ENSPREG00000014761	rabl2	96	78.462	Poecilia_reticulata
ENSCAFG00020006938	-	99	89.593	ENSPPYG00000012000	-	97	89.593	Pongo_abelii
ENSCAFG00020006938	-	99	93.213	ENSPCOG00000024865	-	97	93.213	Propithecus_coquereli
ENSCAFG00020006938	-	99	86.695	ENSPVAG00000004539	-	98	86.695	Pteropus_vampyrus
ENSCAFG00020006938	-	99	74.661	ENSPNYG00000004845	rabl2	99	74.661	Pundamilia_nyererei
ENSCAFG00020006938	-	90	80.100	ENSPNAG00000024254	rabl2	99	76.577	Pygocentrus_nattereri
ENSCAFG00020006938	-	100	89.238	ENSRNOG00000013947	Rabl2	89	89.238	Rattus_norvegicus
ENSCAFG00020006938	-	99	88.235	ENSRBIG00000033607	-	97	88.235	Rhinopithecus_bieti
ENSCAFG00020006938	-	99	89.140	ENSRROG00000031130	-	97	89.140	Rhinopithecus_roxellana
ENSCAFG00020006938	-	99	90.045	ENSSBOG00000033266	-	97	90.045	Saimiri_boliviensis_boliviensis
ENSCAFG00020006938	-	91	76.961	ENSSFOG00015020738	rabl2	95	75.472	Scleropages_formosus
ENSCAFG00020006938	-	98	74.429	ENSSMAG00000004606	rabl2	98	74.429	Scophthalmus_maximus
ENSCAFG00020006938	-	99	74.091	ENSSDUG00000014765	rabl2	99	74.091	Seriola_dumerili
ENSCAFG00020006938	-	76	91.765	ENSSSCG00000025041	-	100	91.765	Sus_scrofa
ENSCAFG00020006938	-	92	76.699	ENSTGUG00000016028	-	99	76.699	Taeniopygia_guttata
ENSCAFG00020006938	-	99	74.091	ENSTRUG00000012454	rabl2	99	74.091	Takifugu_rubripes
ENSCAFG00020006938	-	99	73.636	ENSTNIG00000017951	rabl2	99	73.636	Tetraodon_nigroviridis
ENSCAFG00020006938	-	88	95.431	ENSUAMG00000015761	-	91	94.581	Ursus_americanus
ENSCAFG00020006938	-	100	94.170	ENSUMAG00000017116	-	100	94.170	Ursus_maritimus
ENSCAFG00020006938	-	100	99.103	ENSVVUG00000025761	-	100	99.103	Vulpes_vulpes
ENSCAFG00020006938	-	99	73.423	ENSXETG00000015712	rabl2b	99	73.423	Xenopus_tropicalis
ENSCAFG00020006938	-	95	77.251	ENSXMAG00000004569	rabl2	95	77.251	Xiphophorus_maculatus