EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020007422 (Gene tree)
Gene ID: 112647423
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 19294 bases
Position: chrQKWQ01002225.1:56387589-56406882
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020009198	ResIII	PF04851.15	2.1e-08	1	1
ENSCAFP00020009179	ResIII	PF04851.15	2.1e-08	1	1
ENSCAFP00020009168	ResIII	PF04851.15	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020010667	CHD3-202	7097	-	ENSCAFP00020009179	1844 (aa)	-	-
ENSCAFT00020010689	CHD3-203	6508	-	ENSCAFP00020009198	1831 (aa)	-	-
ENSCAFT00020010652	CHD3-201	7199	-	ENSCAFP00020009168	1878 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020007422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020007422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020007422	CHD3	95	70.660	ENSCAFG00020002892	-	92	71.208
ENSCAFG00020007422	CHD3	98	70.982	ENSCAFG00020008689	CHD5	90	71.429
ENSCAFG00020007422	CHD3	50	37.200	ENSCAFG00020012906	CHD6	88	42.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020007422	CHD3	100	98.582	ENSG00000170004	CHD3	99	97.154	Homo_sapiens
ENSCAFG00020007422	CHD3	86	81.053	ENSAPOG00000005614	chd3	94	81.053	Acanthochromis_polyacanthus
ENSCAFG00020007422	CHD3	74	97.581	ENSAMEG00000003025	-	100	97.581	Ailuropoda_melanoleuca
ENSCAFG00020007422	CHD3	87	87.861	ENSACIG00000019671	chd3	99	87.861	Amphilophus_citrinellus
ENSCAFG00020007422	CHD3	96	79.646	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSCAFG00020007422	CHD3	96	79.578	ENSAPEG00000006341	chd3	92	79.253	Amphiprion_percula
ENSCAFG00020007422	CHD3	96	79.087	ENSATEG00000000848	chd3	99	74.940	Anabas_testudineus
ENSCAFG00020007422	CHD3	100	85.521	ENSACAG00000004276	CHD3	91	85.343	Anolis_carolinensis
ENSCAFG00020007422	CHD3	100	98.472	ENSANAG00000034323	CHD3	99	98.348	Aotus_nancymaae
ENSCAFG00020007422	CHD3	99	75.420	ENSACLG00000009222	chd3	97	76.015	Astatotilapia_calliptera
ENSCAFG00020007422	CHD3	100	98.037	ENSBTAG00000014377	CHD3	93	97.934	Bos_taurus
ENSCAFG00020007422	CHD3	100	98.363	ENSCJAG00000014766	CHD3	94	98.242	Callithrix_jacchus
ENSCAFG00020007422	CHD3	100	100.000	ENSCAFG00000016859	CHD3	94	99.840	Canis_familiaris
ENSCAFG00020007422	CHD3	100	98.418	ENSCHIG00000016737	CHD3	95	98.295	Capra_hircus
ENSCAFG00020007422	CHD3	100	98.309	ENSTSYG00000035658	CHD3	99	95.806	Carlito_syrichta
ENSCAFG00020007422	CHD3	100	94.926	ENSCAPG00000014864	CHD3	94	94.832	Cavia_aperea
ENSCAFG00020007422	CHD3	100	97.654	ENSCPOG00000022653	CHD3	94	97.496	Cavia_porcellus
ENSCAFG00020007422	CHD3	100	98.363	ENSCCAG00000034792	CHD3	94	98.242	Cebus_capucinus
ENSCAFG00020007422	CHD3	100	98.309	ENSCATG00000041717	CHD3	94	98.264	Cercocebus_atys
ENSCAFG00020007422	CHD3	100	97.981	ENSCLAG00000010523	CHD3	95	98.026	Chinchilla_lanigera
ENSCAFG00020007422	CHD3	100	98.200	ENSCSAG00000011122	CHD3	95	98.082	Chlorocebus_sabaeus
ENSCAFG00020007422	CHD3	92	86.051	ENSCPBG00000011966	CHD3	99	87.388	Chrysemys_picta_bellii
ENSCAFG00020007422	CHD3	100	98.254	ENSCANG00000037641	CHD3	99	95.307	Colobus_angolensis_palliatus
ENSCAFG00020007422	CHD3	100	96.999	ENSCGRG00001011306	Chd3	95	97.016	Cricetulus_griseus_chok1gshd
ENSCAFG00020007422	CHD3	94	91.304	ENSCGRG00000007878	Chd3	94	91.304	Cricetulus_griseus_crigri
ENSCAFG00020007422	CHD3	93	79.605	ENSCSEG00000004489	chd3	97	77.732	Cynoglossus_semilaevis
ENSCAFG00020007422	CHD3	89	82.470	ENSCVAG00000007293	chd3	92	83.401	Cyprinodon_variegatus
ENSCAFG00020007422	CHD3	99	77.477	ENSDARG00000021405	chd3	97	78.235	Danio_rerio
ENSCAFG00020007422	CHD3	100	81.868	ENSDNOG00000047846	CHD3	86	89.968	Dasypus_novemcinctus
ENSCAFG00020007422	CHD3	100	97.653	ENSDORG00000010713	Chd3	95	97.666	Dipodomys_ordii
ENSCAFG00020007422	CHD3	98	92.582	ENSETEG00000017733	CHD3	95	92.896	Echinops_telfairi
ENSCAFG00020007422	CHD3	82	69.840	ENSEBUG00000008310	chd3	99	70.396	Eptatretus_burgeri
ENSCAFG00020007422	CHD3	100	98.472	ENSEASG00005019360	CHD3	100	98.472	Equus_asinus_asinus
ENSCAFG00020007422	CHD3	100	98.527	ENSECAG00000010051	CHD3	100	98.527	Equus_caballus
ENSCAFG00020007422	CHD3	92	98.305	ENSEEUG00000015205	CHD3	88	98.305	Erinaceus_europaeus
ENSCAFG00020007422	CHD3	84	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCAFG00020007422	CHD3	100	98.690	ENSFCAG00000009629	CHD3	91	98.561	Felis_catus
ENSCAFG00020007422	CHD3	100	97.981	ENSFDAG00000008220	CHD3	95	98.026	Fukomys_damarensis
ENSCAFG00020007422	CHD3	92	80.406	ENSGMOG00000013599	chd3	87	81.015	Gadus_morhua
ENSCAFG00020007422	CHD3	60	77.171	ENSGAFG00000004055	chd3	95	78.265	Gambusia_affinis
ENSCAFG00020007422	CHD3	99	72.097	ENSGACG00000019275	chd3	96	71.996	Gasterosteus_aculeatus
ENSCAFG00020007422	CHD3	82	85.294	ENSGAGG00000013164	CHD3	98	86.753	Gopherus_agassizii
ENSCAFG00020007422	CHD3	100	98.582	ENSGGOG00000013496	CHD3	99	95.577	Gorilla_gorilla
ENSCAFG00020007422	CHD3	100	97.872	ENSHGLG00000012017	CHD3	94	97.762	Heterocephalus_glaber_female
ENSCAFG00020007422	CHD3	89	91.014	ENSHGLG00100013902	CHD3	95	91.014	Heterocephalus_glaber_male
ENSCAFG00020007422	CHD3	96	74.169	ENSHCOG00000010170	chd3	92	74.693	Hippocampus_comes
ENSCAFG00020007422	CHD3	90	80.797	ENSIPUG00000003271	chd3	96	79.847	Ictalurus_punctatus
ENSCAFG00020007422	CHD3	100	98.036	ENSSTOG00000025907	CHD3	95	97.922	Ictidomys_tridecemlineatus
ENSCAFG00020007422	CHD3	100	97.272	ENSJJAG00000017633	Chd3	95	97.341	Jaculus_jaculus
ENSCAFG00020007422	CHD3	89	90.047	ENSKMAG00000019292	chd3	97	76.095	Kryptolebias_marmoratus
ENSCAFG00020007422	CHD3	98	71.889	ENSLBEG00000028485	chd3	90	72.997	Labrus_bergylta
ENSCAFG00020007422	CHD3	98	76.580	ENSLACG00000008031	CHD3	94	76.752	Latimeria_chalumnae
ENSCAFG00020007422	CHD3	100	77.978	ENSLOCG00000013965	chd3	92	78.434	Lepisosteus_oculatus
ENSCAFG00020007422	CHD3	96	94.121	ENSLAFG00000000572	CHD3	95	94.098	Loxodonta_africana
ENSCAFG00020007422	CHD3	100	98.254	ENSMFAG00000020113	CHD3	99	96.505	Macaca_fascicularis
ENSCAFG00020007422	CHD3	100	95.690	ENSMMUG00000022221	CHD3	94	95.631	Macaca_mulatta
ENSCAFG00020007422	CHD3	100	98.254	ENSMNEG00000001728	CHD3	99	97.706	Macaca_nemestrina
ENSCAFG00020007422	CHD3	100	98.309	ENSMLEG00000032249	CHD3	94	98.264	Mandrillus_leucophaeus
ENSCAFG00020007422	CHD3	92	75.539	ENSMAMG00000000564	chd3	99	77.151	Mastacembelus_armatus
ENSCAFG00020007422	CHD3	100	96.727	ENSMAUG00000013873	Chd3	99	94.365	Mesocricetus_auratus
ENSCAFG00020007422	CHD3	100	98.036	ENSMICG00000008741	CHD3	94	95.112	Microcebus_murinus
ENSCAFG00020007422	CHD3	100	96.999	ENSMOCG00000004848	Chd3	96	97.016	Microtus_ochrogaster
ENSCAFG00020007422	CHD3	98	75.305	ENSMMOG00000012699	chd3	97	75.579	Mola_mola
ENSCAFG00020007422	CHD3	100	92.203	ENSMODG00000007509	CHD3	100	94.056	Monodelphis_domestica
ENSCAFG00020007422	CHD3	100	96.783	MGP_CAROLIEiJ_G0016564	Chd3	96	96.948	Mus_caroli
ENSCAFG00020007422	CHD3	100	96.894	ENSMUSG00000018474	Chd3	96	97.060	Mus_musculus
ENSCAFG00020007422	CHD3	100	97.001	MGP_PahariEiJ_G0017695	Chd3	96	97.170	Mus_pahari
ENSCAFG00020007422	CHD3	100	96.894	MGP_SPRETEiJ_G0017400	Chd3	96	97.060	Mus_spretus
ENSCAFG00020007422	CHD3	93	98.658	ENSMPUG00000008861	CHD3	100	98.658	Mustela_putorius_furo
ENSCAFG00020007422	CHD3	100	97.602	ENSMLUG00000014643	-	94	97.601	Myotis_lucifugus
ENSCAFG00020007422	CHD3	100	97.327	ENSNGAG00000000773	Chd3	93	97.230	Nannospalax_galili
ENSCAFG00020007422	CHD3	93	75.395	ENSNBRG00000000636	chd3	98	76.078	Neolamprologus_brichardi
ENSCAFG00020007422	CHD3	98	95.563	ENSNLEG00000009770	CHD3	95	94.992	Nomascus_leucogenys
ENSCAFG00020007422	CHD3	87	91.209	ENSMEUG00000005852	CHD3	85	91.209	Notamacropus_eugenii
ENSCAFG00020007422	CHD3	100	96.179	ENSOPRG00000011069	CHD3	100	96.261	Ochotona_princeps
ENSCAFG00020007422	CHD3	100	97.490	ENSODEG00000017785	CHD3	94	97.492	Octodon_degus
ENSCAFG00020007422	CHD3	98	76.278	ENSONIG00000009292	chd3	96	76.729	Oreochromis_niloticus
ENSCAFG00020007422	CHD3	100	92.884	ENSOCUG00000029299	CHD3	96	92.100	Oryctolagus_cuniculus
ENSCAFG00020007422	CHD3	84	72.963	ENSORLG00000007107	chd3	91	73.089	Oryzias_latipes
ENSCAFG00020007422	CHD3	58	75.349	ENSORLG00020008387	chd3	90	75.721	Oryzias_latipes_hni
ENSCAFG00020007422	CHD3	90	77.652	ENSOMEG00000013691	chd3	99	78.712	Oryzias_melastigma
ENSCAFG00020007422	CHD3	100	97.981	ENSOGAG00000003216	CHD3	95	97.869	Otolemur_garnettii
ENSCAFG00020007422	CHD3	100	95.915	ENSOARG00000017855	CHD3	94	95.851	Ovis_aries
ENSCAFG00020007422	CHD3	100	96.026	ENSPPAG00000032886	CHD3	99	94.839	Pan_paniscus
ENSCAFG00020007422	CHD3	100	98.908	ENSPPRG00000000626	CHD3	94	98.774	Panthera_pardus
ENSCAFG00020007422	CHD3	100	98.636	ENSPTRG00000008714	CHD3	99	95.685	Pan_troglodytes
ENSCAFG00020007422	CHD3	100	98.309	ENSPANG00000023938	CHD3	99	96.559	Papio_anubis
ENSCAFG00020007422	CHD3	100	76.188	ENSPKIG00000006305	chd3	96	80.095	Paramormyrops_kingsleyae
ENSCAFG00020007422	CHD3	59	89.872	ENSPSIG00000010177	CHD3	98	90.420	Pelodiscus_sinensis
ENSCAFG00020007422	CHD3	100	96.836	ENSPEMG00000014262	Chd3	95	96.697	Peromyscus_maniculatus_bairdii
ENSCAFG00020007422	CHD3	100	92.366	ENSPCIG00000005442	CHD3	95	95.122	Phascolarctos_cinereus
ENSCAFG00020007422	CHD3	98	78.786	ENSPFOG00000012464	chd3	88	75.538	Poecilia_formosa
ENSCAFG00020007422	CHD3	89	83.401	ENSPLAG00000002887	chd3	94	74.060	Poecilia_latipinna
ENSCAFG00020007422	CHD3	53	81.702	ENSPMEG00000016725	chd3	87	75.607	Poecilia_mexicana
ENSCAFG00020007422	CHD3	91	84.133	ENSPREG00000011044	chd3	96	80.014	Poecilia_reticulata
ENSCAFG00020007422	CHD3	100	95.636	ENSPPYG00000007940	CHD3	96	95.578	Pongo_abelii
ENSCAFG00020007422	CHD3	96	97.722	ENSPCAG00000004350	CHD3	92	97.722	Procavia_capensis
ENSCAFG00020007422	CHD3	100	98.036	ENSPCOG00000020952	CHD3	94	97.870	Propithecus_coquereli
ENSCAFG00020007422	CHD3	86	98.362	ENSPVAG00000016344	CHD3	82	98.125	Pteropus_vampyrus
ENSCAFG00020007422	CHD3	99	80.584	ENSPNAG00000020393	chd3	98	80.742	Pygocentrus_nattereri
ENSCAFG00020007422	CHD3	100	96.676	ENSRNOG00000009722	Chd3	100	96.676	Rattus_norvegicus
ENSCAFG00020007422	CHD3	100	94.941	ENSRBIG00000033562	CHD3	99	94.666	Rhinopithecus_bieti
ENSCAFG00020007422	CHD3	99	98.264	ENSRROG00000029554	CHD3	99	96.075	Rhinopithecus_roxellana
ENSCAFG00020007422	CHD3	100	98.527	ENSSBOG00000020719	CHD3	99	97.925	Saimiri_boliviensis_boliviensis
ENSCAFG00020007422	CHD3	99	93.980	ENSSHAG00000014412	CHD3	96	94.089	Sarcophilus_harrisii
ENSCAFG00020007422	CHD3	94	80.029	ENSSFOG00015023123	chd3	98	75.796	Scleropages_formosus
ENSCAFG00020007422	CHD3	84	91.358	ENSSMAG00000006451	chd3	99	76.992	Scophthalmus_maximus
ENSCAFG00020007422	CHD3	56	75.410	ENSSDUG00000005792	chd3	91	75.385	Seriola_dumerili
ENSCAFG00020007422	CHD3	93	80.969	ENSSPAG00000013694	chd3	98	81.383	Stegastes_partitus
ENSCAFG00020007422	CHD3	100	97.983	ENSSSCG00000021363	CHD3	100	97.983	Sus_scrofa
ENSCAFG00020007422	CHD3	77	78.007	ENSTRUG00000014990	chd3	86	78.076	Takifugu_rubripes
ENSCAFG00020007422	CHD3	100	74.692	ENSTNIG00000012998	chd3	95	74.854	Tetraodon_nigroviridis
ENSCAFG00020007422	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCAFG00020007422	CHD3	99	98.669	ENSTTRG00000010295	CHD3	92	98.669	Tursiops_truncatus
ENSCAFG00020007422	CHD3	99	97.823	ENSUAMG00000005475	CHD3	99	97.823	Ursus_americanus
ENSCAFG00020007422	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCAFG00020007422	CHD3	100	100.000	ENSVVUG00000028011	CHD3	99	100.000	Vulpes_vulpes
ENSCAFG00020007422	CHD3	100	73.778	ENSXETG00000012991	chd3	92	73.723	Xenopus_tropicalis
ENSCAFG00020007422	CHD3	50	91.892	ENSXCOG00000000809	chd3	89	83.296	Xiphophorus_couchianus
ENSCAFG00020007422	CHD3	87	86.127	ENSXMAG00000016035	chd3	99	88.095	Xiphophorus_maculatus