EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020007495 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 3241 bases
Position: chrQKWQ01002225.1:56440752-56443992
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020009255	LSM	PF01423.22	4.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020010755	-	3050	-	ENSCAFP00020009255	171 (aa)	-	UPI00027488FB

Gene Model

Click here to download ENSCAFG00020007495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020007495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020007495	-	73	75.781	ENSG00000183011	NAA38	92	75.781	Homo_sapiens
ENSCAFG00020007495	-	58	53.535	ENSAPOG00000005647	naa38	76	54.167	Acanthochromis_polyacanthus
ENSCAFG00020007495	-	51	57.471	ENSAOCG00000023811	naa38	76	54.167	Amphiprion_ocellaris
ENSCAFG00020007495	-	51	57.471	ENSAPEG00000006441	naa38	76	54.167	Amphiprion_percula
ENSCAFG00020007495	-	67	50.877	ENSATEG00000001072	naa38	75	55.914	Anabas_testudineus
ENSCAFG00020007495	-	67	53.509	ENSACAG00000004477	NAA38	67	56.383	Anolis_carolinensis
ENSCAFG00020007495	-	73	76.562	ENSANAG00000027273	NAA38	92	76.562	Aotus_nancymaae
ENSCAFG00020007495	-	51	56.322	ENSACLG00000009549	naa38	76	53.125	Astatotilapia_calliptera
ENSCAFG00020007495	-	71	48.361	ENSAMXG00000037469	naa38	78	55.914	Astyanax_mexicanus
ENSCAFG00020007495	-	73	75.397	ENSBTAG00000014695	NAA38	91	75.397	Bos_taurus
ENSCAFG00020007495	-	73	76.562	ENSCJAG00000014843	NAA38	92	76.562	Callithrix_jacchus
ENSCAFG00020007495	-	100	100.000	ENSCAFG00000032682	-	100	100.000	Canis_familiaris
ENSCAFG00020007495	-	73	75.397	ENSCHIG00000023618	NAA38	91	75.397	Capra_hircus
ENSCAFG00020007495	-	73	76.000	ENSTSYG00000033326	NAA38	91	76.000	Carlito_syrichta
ENSCAFG00020007495	-	77	73.134	ENSCPOG00000032412	NAA38	98	73.134	Cavia_porcellus
ENSCAFG00020007495	-	53	97.802	ENSCCAG00000021358	NAA38	67	97.802	Cebus_capucinus
ENSCAFG00020007495	-	73	75.200	ENSCATG00000032806	NAA38	91	75.200	Cercocebus_atys
ENSCAFG00020007495	-	73	75.200	ENSCLAG00000015879	NAA38	91	75.200	Chinchilla_lanigera
ENSCAFG00020007495	-	73	75.200	ENSCSAG00000011136	NAA38	91	75.200	Chlorocebus_sabaeus
ENSCAFG00020007495	-	60	68.932	ENSCHOG00000009659	NAA38	67	69.149	Choloepus_hoffmanni
ENSCAFG00020007495	-	73	73.016	ENSCANG00000038998	NAA38	92	73.016	Colobus_angolensis_palliatus
ENSCAFG00020007495	-	73	75.200	ENSCGRG00001016403	Naa38	91	75.200	Cricetulus_griseus_chok1gshd
ENSCAFG00020007495	-	54	55.435	ENSCSEG00000004480	naa38	79	55.435	Cynoglossus_semilaevis
ENSCAFG00020007495	-	69	50.847	ENSCVAG00000007301	naa38	78	56.250	Cyprinodon_variegatus
ENSCAFG00020007495	-	65	47.748	ENSDARG00000099122	naa38	71	55.682	Danio_rerio
ENSCAFG00020007495	-	53	67.778	ENSDNOG00000040664	-	88	67.778	Dasypus_novemcinctus
ENSCAFG00020007495	-	73	75.200	ENSDORG00000010169	Naa38	91	75.200	Dipodomys_ordii
ENSCAFG00020007495	-	73	76.800	ENSECAG00000037837	NAA38	91	76.800	Equus_caballus
ENSCAFG00020007495	-	53	57.778	ENSELUG00000019427	naa38	69	57.778	Esox_lucius
ENSCAFG00020007495	-	62	66.038	ENSFCAG00000026713	NAA38	88	69.388	Felis_catus
ENSCAFG00020007495	-	73	73.600	ENSFDAG00000012656	NAA38	91	73.600	Fukomys_damarensis
ENSCAFG00020007495	-	59	55.446	ENSFHEG00000017032	naa38	79	56.250	Fundulus_heteroclitus
ENSCAFG00020007495	-	53	55.556	ENSGMOG00000013571	naa38	84	55.556	Gadus_morhua
ENSCAFG00020007495	-	60	46.602	ENSGALG00000054037	-	75	52.326	Gallus_gallus
ENSCAFG00020007495	-	52	51.685	ENSGALG00000052672	-	80	51.685	Gallus_gallus
ENSCAFG00020007495	-	55	56.383	ENSGAFG00000004021	naa38	76	56.383	Gambusia_affinis
ENSCAFG00020007495	-	54	56.522	ENSGACG00000019273	naa38	75	56.522	Gasterosteus_aculeatus
ENSCAFG00020007495	-	73	76.562	ENSGGOG00000015317	-	92	76.562	Gorilla_gorilla
ENSCAFG00020007495	-	51	56.322	ENSHBUG00000019918	naa38	76	53.125	Haplochromis_burtoni
ENSCAFG00020007495	-	73	72.800	ENSHGLG00000014324	NAA38	91	72.800	Heterocephalus_glaber_female
ENSCAFG00020007495	-	73	72.800	ENSHGLG00100013112	NAA38	91	72.800	Heterocephalus_glaber_male
ENSCAFG00020007495	-	53	53.846	ENSHCOG00000010193	naa38	68	53.846	Hippocampus_comes
ENSCAFG00020007495	-	59	51.485	ENSIPUG00000021657	naa38	75	55.682	Ictalurus_punctatus
ENSCAFG00020007495	-	73	76.000	ENSSTOG00000025950	NAA38	91	76.000	Ictidomys_tridecemlineatus
ENSCAFG00020007495	-	74	48.819	ENSKMAG00000019461	naa38	88	49.600	Kryptolebias_marmoratus
ENSCAFG00020007495	-	68	47.414	ENSLBEG00000028489	naa38	75	53.261	Labrus_bergylta
ENSCAFG00020007495	-	54	50.538	ENSLACG00000007757	NAA38	78	50.538	Latimeria_chalumnae
ENSCAFG00020007495	-	69	49.153	ENSLOCG00000013981	naa38	72	54.255	Lepisosteus_oculatus
ENSCAFG00020007495	-	73	76.800	ENSLAFG00000009169	NAA38	91	76.800	Loxodonta_africana
ENSCAFG00020007495	-	73	73.016	ENSMFAG00000037580	NAA38	92	73.016	Macaca_fascicularis
ENSCAFG00020007495	-	73	75.200	ENSMMUG00000008178	NAA38	91	75.200	Macaca_mulatta
ENSCAFG00020007495	-	73	73.016	ENSMNEG00000031597	NAA38	92	73.016	Macaca_nemestrina
ENSCAFG00020007495	-	73	73.016	ENSMLEG00000037461	NAA38	92	73.016	Mandrillus_leucophaeus
ENSCAFG00020007495	-	69	48.305	ENSMAMG00000000538	naa38	73	55.319	Mastacembelus_armatus
ENSCAFG00020007495	-	51	56.322	ENSMZEG00005021265	naa38	76	53.125	Maylandia_zebra
ENSCAFG00020007495	-	73	75.200	ENSMAUG00000020052	Naa38	91	75.200	Mesocricetus_auratus
ENSCAFG00020007495	-	60	68.932	ENSMICG00000015147	NAA38	88	70.408	Microcebus_murinus
ENSCAFG00020007495	-	73	75.200	ENSMOCG00000002129	Naa38	91	75.200	Microtus_ochrogaster
ENSCAFG00020007495	-	53	56.667	ENSMMOG00000012705	naa38	72	55.435	Mola_mola
ENSCAFG00020007495	-	73	66.667	ENSMODG00000007434	NAA38	71	88.764	Monodelphis_domestica
ENSCAFG00020007495	-	54	54.348	ENSMALG00000001438	naa38	72	54.348	Monopterus_albus
ENSCAFG00020007495	-	73	74.400	MGP_CAROLIEiJ_G0016568	Naa38	91	74.400	Mus_caroli
ENSCAFG00020007495	-	73	74.400	ENSMUSG00000059278	Naa38	91	74.400	Mus_musculus
ENSCAFG00020007495	-	73	74.400	MGP_PahariEiJ_G0017699	Naa38	91	74.400	Mus_pahari
ENSCAFG00020007495	-	73	74.400	MGP_SPRETEiJ_G0017404	Naa38	91	74.400	Mus_spretus
ENSCAFG00020007495	-	73	76.000	ENSMPUG00000008886	NAA38	91	76.000	Mustela_putorius_furo
ENSCAFG00020007495	-	73	74.400	ENSNGAG00000019042	Naa38	91	74.400	Nannospalax_galili
ENSCAFG00020007495	-	51	56.322	ENSNBRG00000000619	naa38	76	53.125	Neolamprologus_brichardi
ENSCAFG00020007495	-	73	76.562	ENSNLEG00000027601	NAA38	92	76.562	Nomascus_leucogenys
ENSCAFG00020007495	-	70	60.331	ENSOPRG00000008383	NAA38	50	69.149	Ochotona_princeps
ENSCAFG00020007495	-	73	75.200	ENSODEG00000017702	NAA38	91	75.200	Octodon_degus
ENSCAFG00020007495	-	51	56.322	ENSONIG00000009306	naa38	76	53.125	Oreochromis_niloticus
ENSCAFG00020007495	-	73	76.000	ENSOCUG00000017284	NAA38	91	76.000	Oryctolagus_cuniculus
ENSCAFG00020007495	-	68	52.586	ENSORLG00000007119	naa38	84	49.593	Oryzias_latipes
ENSCAFG00020007495	-	68	52.586	ENSORLG00020008335	naa38	84	49.593	Oryzias_latipes_hni
ENSCAFG00020007495	-	55	58.511	ENSORLG00015005138	naa38	75	58.511	Oryzias_latipes_hsok
ENSCAFG00020007495	-	67	52.632	ENSOMEG00000013718	naa38	75	57.895	Oryzias_melastigma
ENSCAFG00020007495	-	73	76.562	ENSPPAG00000026097	NAA38	92	76.562	Pan_paniscus
ENSCAFG00020007495	-	73	75.781	ENSPTRG00000008712	NAA38	92	75.781	Pan_troglodytes
ENSCAFG00020007495	-	73	73.016	ENSPANG00000023935	NAA38	92	73.016	Papio_anubis
ENSCAFG00020007495	-	56	54.167	ENSPMGG00000008216	naa38	72	55.435	Periophthalmus_magnuspinnatus
ENSCAFG00020007495	-	73	75.200	ENSPEMG00000015014	Naa38	91	75.200	Peromyscus_maniculatus_bairdii
ENSCAFG00020007495	-	68	50.862	ENSPFOG00000012670	naa38	78	56.250	Poecilia_formosa
ENSCAFG00020007495	-	68	50.862	ENSPLAG00000002707	naa38	78	56.250	Poecilia_latipinna
ENSCAFG00020007495	-	58	56.000	ENSPMEG00000016652	naa38	83	56.250	Poecilia_mexicana
ENSCAFG00020007495	-	65	51.304	ENSPREG00000011017	naa38	55	56.522	Poecilia_reticulata
ENSCAFG00020007495	-	57	70.408	ENSPCAG00000013613	NAA38	51	70.408	Procavia_capensis
ENSCAFG00020007495	-	65	63.964	ENSPCOG00000020844	NAA38	88	69.388	Propithecus_coquereli
ENSCAFG00020007495	-	51	56.322	ENSPNYG00000021415	naa38	76	53.125	Pundamilia_nyererei
ENSCAFG00020007495	-	65	49.550	ENSPNAG00000020828	naa38	92	54.286	Pygocentrus_nattereri
ENSCAFG00020007495	-	73	75.200	ENSRNOG00000009823	Naa38	91	75.200	Rattus_norvegicus
ENSCAFG00020007495	-	58	69.000	ENSRBIG00000039054	NAA38	88	69.388	Rhinopithecus_bieti
ENSCAFG00020007495	-	58	69.000	ENSRROG00000037370	NAA38	88	69.388	Rhinopithecus_roxellana
ENSCAFG00020007495	-	56	55.208	ENSSFOG00015023111	naa38	77	55.208	Scleropages_formosus
ENSCAFG00020007495	-	69	49.153	ENSSDUG00000005842	naa38	74	55.319	Seriola_dumerili
ENSCAFG00020007495	-	69	49.153	ENSSLDG00000003013	naa38	74	55.319	Seriola_lalandi_dorsalis
ENSCAFG00020007495	-	63	54.630	ENSSPUG00000014761	NAA38	95	52.885	Sphenodon_punctatus
ENSCAFG00020007495	-	51	57.471	ENSSPAG00000013671	naa38	76	54.167	Stegastes_partitus
ENSCAFG00020007495	-	73	75.200	ENSSSCG00000017971	NAA38	91	75.200	Sus_scrofa
ENSCAFG00020007495	-	69	46.610	ENSTRUG00000021566	naa38	72	54.348	Takifugu_rubripes
ENSCAFG00020007495	-	73	76.000	ENSUAMG00000005463	NAA38	91	76.000	Ursus_americanus
ENSCAFG00020007495	-	57	69.388	ENSVPAG00000005503	NAA38	50	68.085	Vicugna_pacos
ENSCAFG00020007495	-	73	76.800	ENSVVUG00000028004	NAA38	91	76.800	Vulpes_vulpes
ENSCAFG00020007495	-	73	53.600	ENSXETG00000015633	naa38	91	44.776	Xenopus_tropicalis
ENSCAFG00020007495	-	54	57.609	ENSXCOG00000000768	naa38	69	57.609	Xiphophorus_couchianus
ENSCAFG00020007495	-	54	57.609	ENSXMAG00000028369	naa38	76	56.383	Xiphophorus_maculatus