EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020007711 (Gene tree)
Gene ID: 112656979
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 6372 bases
Position: chrQKWQ01001014.1:71199956-71206327
Accession: 112656979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020009517	RRM_1	PF00076.22	2.7e-35	1	2
ENSCAFP00020009517	RRM_1	PF00076.22	2.7e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020011063	RBM23-201	1348	-	ENSCAFP00020009517	445 (aa)	XP_025298426	UPI00005A1630

Gene Model

Click here to download ENSCAFG00020007711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020007711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020007711	RBM23	58	43.056	ENSCAFG00020013828	PABPC1L	60	41.463
ENSCAFG00020007711	RBM23	98	58.170	ENSCAFG00020005676	RBM39	62	68.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020007711	RBM23	100	90.562	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCAFG00020007711	RBM23	100	95.111	ENSAMEG00000007322	RBM23	100	94.889	Ailuropoda_melanoleuca
ENSCAFG00020007711	RBM23	72	82.569	ENSACAG00000001569	RBM23	68	82.972	Anolis_carolinensis
ENSCAFG00020007711	RBM23	100	68.315	ENSANAG00000033790	-	72	75.079	Aotus_nancymaae
ENSCAFG00020007711	RBM23	100	87.689	ENSBTAG00000038333	RBM23	100	86.393	Bos_taurus
ENSCAFG00020007711	RBM23	100	88.565	ENSCJAG00000008482	RBM23	100	86.547	Callithrix_jacchus
ENSCAFG00020007711	RBM23	100	93.231	ENSCAFG00000011217	RBM23	100	93.231	Canis_familiaris
ENSCAFG00020007711	RBM23	100	87.041	ENSCHIG00000025709	RBM23	100	86.825	Capra_hircus
ENSCAFG00020007711	RBM23	100	91.946	ENSTSYG00000014755	RBM23	100	94.891	Carlito_syrichta
ENSCAFG00020007711	RBM23	100	75.281	ENSCCAG00000028584	-	100	79.927	Cebus_capucinus
ENSCAFG00020007711	RBM23	100	89.213	ENSCCAG00000025114	-	100	88.764	Cebus_capucinus
ENSCAFG00020007711	RBM23	100	91.685	ENSCATG00000017832	RBM23	100	92.143	Cercocebus_atys
ENSCAFG00020007711	RBM23	100	91.051	ENSCSAG00000016213	RBM23	100	90.604	Chlorocebus_sabaeus
ENSCAFG00020007711	RBM23	100	66.071	ENSCPBG00000026096	RBM23	77	80.757	Chrysemys_picta_bellii
ENSCAFG00020007711	RBM23	95	84.670	ENSCANG00000001893	RBM23	100	82.075	Colobus_angolensis_palliatus
ENSCAFG00020007711	RBM23	100	88.989	ENSDNOG00000032457	RBM23	100	87.191	Dasypus_novemcinctus
ENSCAFG00020007711	RBM23	62	95.255	ENSDORG00000004926	-	100	95.255	Dipodomys_ordii
ENSCAFG00020007711	RBM23	50	80.000	ENSETEG00000017915	-	87	80.000	Echinops_telfairi
ENSCAFG00020007711	RBM23	96	91.860	ENSEASG00005011696	RBM23	95	90.000	Equus_asinus_asinus
ENSCAFG00020007711	RBM23	100	84.944	ENSECAG00000009910	RBM23	100	80.674	Equus_caballus
ENSCAFG00020007711	RBM23	100	86.547	ENSEEUG00000015560	RBM23	100	86.323	Erinaceus_europaeus
ENSCAFG00020007711	RBM23	100	95.056	ENSFCAG00000006632	RBM23	100	95.056	Felis_catus
ENSCAFG00020007711	RBM23	100	89.888	ENSGGOG00000015707	RBM23	100	90.787	Gorilla_gorilla
ENSCAFG00020007711	RBM23	100	81.798	ENSHGLG00100006114	RBM23	99	81.348	Heterocephalus_glaber_male
ENSCAFG00020007711	RBM23	62	94.526	ENSSTOG00000010354	RBM23	100	94.526	Ictidomys_tridecemlineatus
ENSCAFG00020007711	RBM23	100	82.774	ENSLAFG00000018567	RBM23	100	84.340	Loxodonta_africana
ENSCAFG00020007711	RBM23	100	91.723	ENSMFAG00000037595	RBM23	100	91.275	Macaca_fascicularis
ENSCAFG00020007711	RBM23	100	91.499	ENSMMUG00000018381	RBM23	100	89.933	Macaca_mulatta
ENSCAFG00020007711	RBM23	100	91.910	ENSMNEG00000042442	RBM23	100	91.685	Macaca_nemestrina
ENSCAFG00020007711	RBM23	100	82.628	ENSMLEG00000039954	RBM23	100	79.733	Mandrillus_leucophaeus
ENSCAFG00020007711	RBM23	100	90.828	ENSMICG00000006364	RBM23	100	92.701	Microcebus_murinus
ENSCAFG00020007711	RBM23	100	88.106	ENSMODG00000024448	RBM23	100	88.546	Monodelphis_domestica
ENSCAFG00020007711	RBM23	100	96.413	ENSMPUG00000007151	RBM23	100	96.413	Mustela_putorius_furo
ENSCAFG00020007711	RBM23	100	79.642	ENSMLUG00000012923	RBM23	100	83.149	Myotis_lucifugus
ENSCAFG00020007711	RBM23	100	90.179	ENSNLEG00000014792	RBM23	100	89.509	Nomascus_leucogenys
ENSCAFG00020007711	RBM23	54	97.143	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSCAFG00020007711	RBM23	72	87.850	ENSOPRG00000001092	RBM23	100	86.292	Ochotona_princeps
ENSCAFG00020007711	RBM23	71	92.114	ENSOCUG00000002006	RBM23	100	87.472	Oryctolagus_cuniculus
ENSCAFG00020007711	RBM23	99	78.603	ENSOGAG00000014794	RBM23	100	78.495	Otolemur_garnettii
ENSCAFG00020007711	RBM23	100	85.961	ENSOARG00000019398	RBM23	100	85.961	Ovis_aries
ENSCAFG00020007711	RBM23	100	90.402	ENSPPAG00000037922	RBM23	100	88.839	Pan_paniscus
ENSCAFG00020007711	RBM23	100	94.831	ENSPPRG00000023344	RBM23	100	94.831	Panthera_pardus
ENSCAFG00020007711	RBM23	100	91.685	ENSPTIG00000007831	RBM23	100	90.112	Panthera_tigris_altaica
ENSCAFG00020007711	RBM23	100	89.732	ENSPTRG00000006151	RBM23	100	89.062	Pan_troglodytes
ENSCAFG00020007711	RBM23	97	87.586	ENSPANG00000001324	RBM23	100	94.585	Papio_anubis
ENSCAFG00020007711	RBM23	100	87.336	ENSPCIG00000027773	RBM23	100	87.991	Phascolarctos_cinereus
ENSCAFG00020007711	RBM23	100	84.944	ENSPPYG00000005649	RBM23	100	82.472	Pongo_abelii
ENSCAFG00020007711	RBM23	100	66.292	ENSPCAG00000006669	RBM23	74	75.394	Procavia_capensis
ENSCAFG00020007711	RBM23	100	91.723	ENSPCOG00000018564	RBM23	100	95.255	Propithecus_coquereli
ENSCAFG00020007711	RBM23	100	89.013	ENSPVAG00000013785	RBM23	100	88.565	Pteropus_vampyrus
ENSCAFG00020007711	RBM23	100	91.051	ENSRBIG00000039276	RBM23	100	90.604	Rhinopithecus_bieti
ENSCAFG00020007711	RBM23	100	91.051	ENSRROG00000044026	RBM23	100	90.604	Rhinopithecus_roxellana
ENSCAFG00020007711	RBM23	100	89.457	ENSSBOG00000023037	-	100	85.304	Saimiri_boliviensis_boliviensis
ENSCAFG00020007711	RBM23	96	67.133	ENSSBOG00000034977	-	73	73.667	Saimiri_boliviensis_boliviensis
ENSCAFG00020007711	RBM23	71	93.671	ENSSHAG00000012932	RBM23	100	84.934	Sarcophilus_harrisii
ENSCAFG00020007711	RBM23	100	90.157	ENSSARG00000005165	RBM23	100	88.814	Sorex_araneus
ENSCAFG00020007711	RBM23	72	80.864	ENSSPUG00000000489	RBM23	71	80.745	Sphenodon_punctatus
ENSCAFG00020007711	RBM23	100	85.523	ENSSSCG00000026700	RBM23	100	87.082	Sus_scrofa
ENSCAFG00020007711	RBM23	100	84.989	ENSTBEG00000011543	RBM23	100	84.989	Tupaia_belangeri
ENSCAFG00020007711	RBM23	100	87.472	ENSTTRG00000001500	RBM23	100	87.025	Tursiops_truncatus
ENSCAFG00020007711	RBM23	100	94.843	ENSUAMG00000008524	RBM23	100	95.740	Ursus_americanus
ENSCAFG00020007711	RBM23	100	94.843	ENSUMAG00000014075	RBM23	100	95.740	Ursus_maritimus
ENSCAFG00020007711	RBM23	100	99.326	ENSVVUG00000019815	RBM23	100	99.326	Vulpes_vulpes
ENSCAFG00020007711	RBM23	68	75.490	ENSXETG00000022623	rbm23	71	74.528	Xenopus_tropicalis