EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020008143 (Gene tree)
Gene ID: 112677522
Gene Symbol: NCBP3
Alias: C17orf85|ELG|HSA277841
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 29967 bases
Position: chrQKWQ01001968.1:13456878-13486844
Accession: 112677522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010026	NCBP3	PF10309.9	1e-20	1	1
ENSCAFP00020010023	NCBP3	PF10309.9	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020011636	NCBP3-201	1881	-	ENSCAFP00020010023	626 (aa)	XP_025331839	UPI000274A5AC
ENSCAFT00020011639	NCBP3-202	1815	-	ENSCAFP00020010026	604 (aa)	XP_025331842	UPI000BAA255D

Gene Model

Click here to download ENSCAFG00020008143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008143	NCBP3	95	92.525	ENSG00000074356	NCBP3	100	95.000	Homo_sapiens
ENSCAFG00020008143	NCBP3	95	55.968	ENSAPOG00000020809	ncbp3	97	56.501	Acanthochromis_polyacanthus
ENSCAFG00020008143	NCBP3	95	93.443	ENSAMEG00000009372	NCBP3	97	93.443	Ailuropoda_melanoleuca
ENSCAFG00020008143	NCBP3	95	52.614	ENSACIG00000024257	ncbp3	97	55.285	Amphilophus_citrinellus
ENSCAFG00020008143	NCBP3	95	55.735	ENSAPEG00000020857	ncbp3	97	56.431	Amphiprion_percula
ENSCAFG00020008143	NCBP3	95	54.488	ENSATEG00000010801	ncbp3	97	55.748	Anabas_testudineus
ENSCAFG00020008143	NCBP3	85	79.710	ENSAPLG00000007373	NCBP3	97	79.167	Anas_platyrhynchos
ENSCAFG00020008143	NCBP3	95	71.330	ENSANAG00000020550	-	97	71.330	Aotus_nancymaae
ENSCAFG00020008143	NCBP3	95	86.093	ENSANAG00000024918	-	97	86.589	Aotus_nancymaae
ENSCAFG00020008143	NCBP3	95	56.472	ENSACLG00000000455	ncbp3	97	56.522	Astatotilapia_calliptera
ENSCAFG00020008143	NCBP3	95	56.672	ENSAMXG00000005968	ncbp3	97	58.122	Astyanax_mexicanus
ENSCAFG00020008143	NCBP3	95	93.792	ENSBTAG00000016621	NCBP3	97	93.289	Bos_taurus
ENSCAFG00020008143	NCBP3	100	100.000	ENSCAFG00000019371	NCBP3	100	100.000	Canis_familiaris
ENSCAFG00020008143	NCBP3	95	94.295	ENSCHIG00000009002	NCBP3	97	94.295	Capra_hircus
ENSCAFG00020008143	NCBP3	95	93.344	ENSTSYG00000008184	NCBP3	97	93.344	Carlito_syrichta
ENSCAFG00020008143	NCBP3	86	91.728	ENSCAPG00000016045	NCBP3	94	91.728	Cavia_aperea
ENSCAFG00020008143	NCBP3	95	91.681	ENSCPOG00000015529	NCBP3	97	91.681	Cavia_porcellus
ENSCAFG00020008143	NCBP3	95	92.193	ENSCCAG00000021154	NCBP3	97	92.027	Cebus_capucinus
ENSCAFG00020008143	NCBP3	100	92.552	ENSCATG00000013041	NCBP3	100	92.552	Cercocebus_atys
ENSCAFG00020008143	NCBP3	95	94.799	ENSCLAG00000012229	NCBP3	97	94.799	Chinchilla_lanigera
ENSCAFG00020008143	NCBP3	95	87.708	ENSCSAG00000013543	NCBP3	97	87.708	Chlorocebus_sabaeus
ENSCAFG00020008143	NCBP3	95	89.632	ENSCHOG00000012323	NCBP3	97	90.134	Choloepus_hoffmanni
ENSCAFG00020008143	NCBP3	95	77.963	ENSCPBG00000014824	NCBP3	97	79.630	Chrysemys_picta_bellii
ENSCAFG00020008143	NCBP3	95	84.027	ENSCANG00000033561	NCBP3	97	84.027	Colobus_angolensis_palliatus
ENSCAFG00020008143	NCBP3	95	91.960	ENSCGRG00001018538	Ncbp3	97	91.457	Cricetulus_griseus_chok1gshd
ENSCAFG00020008143	NCBP3	85	91.776	ENSCGRG00000015075	Ncbp3	97	91.215	Cricetulus_griseus_crigri
ENSCAFG00020008143	NCBP3	95	55.305	ENSCSEG00000006375	ncbp3	97	55.556	Cynoglossus_semilaevis
ENSCAFG00020008143	NCBP3	95	47.612	ENSCVAG00000020563	ncbp3	98	48.862	Cyprinodon_variegatus
ENSCAFG00020008143	NCBP3	95	53.676	ENSDARG00000044597	ncbp3	97	54.545	Danio_rerio
ENSCAFG00020008143	NCBP3	100	94.586	ENSDNOG00000006490	NCBP3	100	94.586	Dasypus_novemcinctus
ENSCAFG00020008143	NCBP3	95	91.639	ENSDORG00000010141	Ncbp3	97	91.973	Dipodomys_ordii
ENSCAFG00020008143	NCBP3	100	96.651	ENSEASG00005013399	NCBP3	100	96.651	Equus_asinus_asinus
ENSCAFG00020008143	NCBP3	100	96.810	ENSECAG00000008444	NCBP3	100	96.810	Equus_caballus
ENSCAFG00020008143	NCBP3	93	74.443	ENSEEUG00000008573	NCBP3	95	73.242	Erinaceus_europaeus
ENSCAFG00020008143	NCBP3	95	52.639	ENSELUG00000009182	ncbp3	97	53.070	Esox_lucius
ENSCAFG00020008143	NCBP3	95	97.487	ENSFCAG00000007929	NCBP3	97	97.487	Felis_catus
ENSCAFG00020008143	NCBP3	89	81.071	ENSFALG00000006704	NCBP3	97	81.071	Ficedula_albicollis
ENSCAFG00020008143	NCBP3	95	93.970	ENSFDAG00000013355	NCBP3	97	93.970	Fukomys_damarensis
ENSCAFG00020008143	NCBP3	94	49.922	ENSFHEG00000005607	ncbp3	98	49.235	Fundulus_heteroclitus
ENSCAFG00020008143	NCBP3	71	60.984	ENSGMOG00000001007	ncbp3	77	59.539	Gadus_morhua
ENSCAFG00020008143	NCBP3	95	77.796	ENSGALG00000002653	NCBP3	97	79.500	Gallus_gallus
ENSCAFG00020008143	NCBP3	82	55.948	ENSGAFG00000008912	ncbp3	81	57.407	Gambusia_affinis
ENSCAFG00020008143	NCBP3	95	53.259	ENSGACG00000020902	ncbp3	96	53.440	Gasterosteus_aculeatus
ENSCAFG00020008143	NCBP3	95	78.464	ENSGAGG00000014490	NCBP3	97	78.017	Gopherus_agassizii
ENSCAFG00020008143	NCBP3	95	92.512	ENSGGOG00000007496	NCBP3	97	92.346	Gorilla_gorilla
ENSCAFG00020008143	NCBP3	95	94.463	ENSHGLG00000015839	NCBP3	97	94.463	Heterocephalus_glaber_female
ENSCAFG00020008143	NCBP3	95	94.463	ENSHGLG00100007256	NCBP3	97	94.463	Heterocephalus_glaber_male
ENSCAFG00020008143	NCBP3	95	50.898	ENSHCOG00000004161	ncbp3	98	52.108	Hippocampus_comes
ENSCAFG00020008143	NCBP3	95	56.352	ENSIPUG00000024397	ncbp3	97	58.654	Ictalurus_punctatus
ENSCAFG00020008143	NCBP3	72	93.833	ENSSTOG00000002101	NCBP3	100	94.493	Ictidomys_tridecemlineatus
ENSCAFG00020008143	NCBP3	95	82.609	ENSJJAG00000000634	Ncbp3	97	82.441	Jaculus_jaculus
ENSCAFG00020008143	NCBP3	95	51.556	ENSKMAG00000001932	ncbp3	98	51.923	Kryptolebias_marmoratus
ENSCAFG00020008143	NCBP3	95	49.178	ENSLBEG00000001558	-	98	50.445	Labrus_bergylta
ENSCAFG00020008143	NCBP3	95	50.729	ENSLBEG00000006036	ncbp3	97	51.286	Labrus_bergylta
ENSCAFG00020008143	NCBP3	95	62.625	ENSLACG00000018791	NCBP3	97	61.020	Latimeria_chalumnae
ENSCAFG00020008143	NCBP3	95	61.103	ENSLOCG00000006706	ncbp3	97	61.420	Lepisosteus_oculatus
ENSCAFG00020008143	NCBP3	95	93.667	ENSLAFG00000002067	NCBP3	97	93.667	Loxodonta_africana
ENSCAFG00020008143	NCBP3	95	92.321	ENSMFAG00000024176	NCBP3	97	92.487	Macaca_fascicularis
ENSCAFG00020008143	NCBP3	95	92.321	ENSMMUG00000008556	NCBP3	97	92.487	Macaca_mulatta
ENSCAFG00020008143	NCBP3	100	92.687	ENSMNEG00000041374	NCBP3	100	92.846	Macaca_nemestrina
ENSCAFG00020008143	NCBP3	85	92.037	ENSMLEG00000034703	NCBP3	97	92.037	Mandrillus_leucophaeus
ENSCAFG00020008143	NCBP3	95	51.170	ENSMAMG00000022461	ncbp3	98	51.971	Mastacembelus_armatus
ENSCAFG00020008143	NCBP3	95	56.726	ENSMZEG00005027802	ncbp3	97	55.806	Maylandia_zebra
ENSCAFG00020008143	NCBP3	89	79.537	ENSMGAG00000004685	NCBP3	97	81.139	Meleagris_gallopavo
ENSCAFG00020008143	NCBP3	95	87.687	ENSMICG00000015798	NCBP3	97	87.687	Microcebus_murinus
ENSCAFG00020008143	NCBP3	95	91.319	ENSMOCG00000016446	Ncbp3	97	90.818	Microtus_ochrogaster
ENSCAFG00020008143	NCBP3	95	53.035	ENSMMOG00000012577	ncbp3	97	52.997	Mola_mola
ENSCAFG00020008143	NCBP3	94	52.582	ENSMALG00000009173	ncbp3	97	54.000	Monopterus_albus
ENSCAFG00020008143	NCBP3	95	91.792	MGP_CAROLIEiJ_G0016684	Ncbp3	97	91.792	Mus_caroli
ENSCAFG00020008143	NCBP3	95	91.960	ENSMUSG00000020783	Ncbp3	97	91.960	Mus_musculus
ENSCAFG00020008143	NCBP3	95	91.960	MGP_PahariEiJ_G0017817	Ncbp3	97	91.960	Mus_pahari
ENSCAFG00020008143	NCBP3	95	91.960	MGP_SPRETEiJ_G0017521	Ncbp3	97	91.960	Mus_spretus
ENSCAFG00020008143	NCBP3	100	98.882	ENSMPUG00000012357	NCBP3	100	98.882	Mustela_putorius_furo
ENSCAFG00020008143	NCBP3	95	92.785	ENSMLUG00000017060	NCBP3	97	93.121	Myotis_lucifugus
ENSCAFG00020008143	NCBP3	95	92.462	ENSNGAG00000020321	Ncbp3	97	92.462	Nannospalax_galili
ENSCAFG00020008143	NCBP3	78	56.891	ENSNBRG00000017354	ncbp3	93	56.433	Neolamprologus_brichardi
ENSCAFG00020008143	NCBP3	95	86.333	ENSNLEG00000017279	NCBP3	97	86.333	Nomascus_leucogenys
ENSCAFG00020008143	NCBP3	65	83.607	ENSMEUG00000015701	-	75	83.607	Notamacropus_eugenii
ENSCAFG00020008143	NCBP3	95	90.436	ENSOPRG00000016925	NCBP3	97	90.436	Ochotona_princeps
ENSCAFG00020008143	NCBP3	95	93.635	ENSODEG00000016617	NCBP3	97	93.802	Octodon_degus
ENSCAFG00020008143	NCBP3	95	50.295	ENSONIG00000007434	ncbp3	98	51.395	Oreochromis_niloticus
ENSCAFG00020008143	NCBP3	95	77.704	ENSOANG00000010109	NCBP3	97	77.870	Ornithorhynchus_anatinus
ENSCAFG00020008143	NCBP3	100	94.569	ENSOCUG00000008045	NCBP3	100	94.569	Oryctolagus_cuniculus
ENSCAFG00020008143	NCBP3	95	53.149	ENSORLG00000013703	ncbp3	98	53.467	Oryzias_latipes
ENSCAFG00020008143	NCBP3	95	52.180	ENSORLG00020011764	ncbp3	98	52.761	Oryzias_latipes_hni
ENSCAFG00020008143	NCBP3	95	52.102	ENSORLG00015018733	ncbp3	98	53.292	Oryzias_latipes_hsok
ENSCAFG00020008143	NCBP3	95	54.012	ENSOMEG00000017858	ncbp3	98	54.000	Oryzias_melastigma
ENSCAFG00020008143	NCBP3	95	92.525	ENSOGAG00000008803	NCBP3	97	92.525	Otolemur_garnettii
ENSCAFG00020008143	NCBP3	80	93.776	ENSOARG00000017750	NCBP3	96	93.776	Ovis_aries
ENSCAFG00020008143	NCBP3	95	92.525	ENSPPAG00000030530	NCBP3	97	92.525	Pan_paniscus
ENSCAFG00020008143	NCBP3	95	97.492	ENSPPRG00000022474	NCBP3	97	97.492	Panthera_pardus
ENSCAFG00020008143	NCBP3	87	96.350	ENSPTIG00000009607	NCBP3	89	96.350	Panthera_tigris_altaica
ENSCAFG00020008143	NCBP3	95	92.537	ENSPTRG00000008578	NCBP3	97	92.537	Pan_troglodytes
ENSCAFG00020008143	NCBP3	95	92.013	ENSPANG00000024364	NCBP3	97	92.013	Papio_anubis
ENSCAFG00020008143	NCBP3	88	60.106	ENSPKIG00000008466	ncbp3	87	59.666	Paramormyrops_kingsleyae
ENSCAFG00020008143	NCBP3	79	76.494	ENSPSIG00000013732	NCBP3	95	75.697	Pelodiscus_sinensis
ENSCAFG00020008143	NCBP3	95	50.466	ENSPMGG00000003344	ncbp3	97	50.855	Periophthalmus_magnuspinnatus
ENSCAFG00020008143	NCBP3	95	91.792	ENSPEMG00000007746	Ncbp3	97	91.290	Peromyscus_maniculatus_bairdii
ENSCAFG00020008143	NCBP3	95	77.561	ENSPCIG00000008605	NCBP3	97	77.383	Phascolarctos_cinereus
ENSCAFG00020008143	NCBP3	84	52.341	ENSPFOG00000000721	ncbp3	96	53.388	Poecilia_formosa
ENSCAFG00020008143	NCBP3	95	51.897	ENSPLAG00000015399	ncbp3	98	53.743	Poecilia_latipinna
ENSCAFG00020008143	NCBP3	95	51.121	ENSPMEG00000000896	ncbp3	98	53.243	Poecilia_mexicana
ENSCAFG00020008143	NCBP3	95	52.359	ENSPREG00000001681	ncbp3	98	53.614	Poecilia_reticulata
ENSCAFG00020008143	NCBP3	100	93.038	ENSPPYG00000007823	NCBP3	100	92.880	Pongo_abelii
ENSCAFG00020008143	NCBP3	95	90.101	ENSPCAG00000012614	NCBP3	97	90.101	Procavia_capensis
ENSCAFG00020008143	NCBP3	95	92.845	ENSPCOG00000016793	NCBP3	97	92.845	Propithecus_coquereli
ENSCAFG00020008143	NCBP3	94	88.776	ENSPVAG00000012746	NCBP3	97	88.776	Pteropus_vampyrus
ENSCAFG00020008143	NCBP3	94	51.567	ENSPNYG00000022677	ncbp3	98	52.241	Pundamilia_nyererei
ENSCAFG00020008143	NCBP3	95	55.721	ENSPNAG00000003219	ncbp3	97	57.840	Pygocentrus_nattereri
ENSCAFG00020008143	NCBP3	95	91.960	ENSRNOG00000018550	Ncbp3	97	91.792	Rattus_norvegicus
ENSCAFG00020008143	NCBP3	95	91.847	ENSRBIG00000033247	NCBP3	97	91.847	Rhinopithecus_bieti
ENSCAFG00020008143	NCBP3	100	92.393	ENSRROG00000043833	NCBP3	100	92.393	Rhinopithecus_roxellana
ENSCAFG00020008143	NCBP3	100	93.333	ENSSBOG00000023178	NCBP3	100	93.333	Saimiri_boliviensis_boliviensis
ENSCAFG00020008143	NCBP3	79	76.639	ENSSHAG00000003466	NCBP3	96	75.820	Sarcophilus_harrisii
ENSCAFG00020008143	NCBP3	95	58.706	ENSSFOG00015005808	ncbp3	97	58.472	Scleropages_formosus
ENSCAFG00020008143	NCBP3	87	53.156	ENSSMAG00000010917	ncbp3	98	50.867	Scophthalmus_maximus
ENSCAFG00020008143	NCBP3	95	55.859	ENSSDUG00000023402	ncbp3	97	56.290	Seriola_dumerili
ENSCAFG00020008143	NCBP3	95	45.257	ENSSLDG00000000742	ncbp3	97	45.146	Seriola_lalandi_dorsalis
ENSCAFG00020008143	NCBP3	95	84.808	ENSSARG00000006634	NCBP3	97	84.975	Sorex_araneus
ENSCAFG00020008143	NCBP3	95	74.141	ENSSPUG00000002240	NCBP3	97	72.549	Sphenodon_punctatus
ENSCAFG00020008143	NCBP3	95	50.798	ENSSPAG00000011223	ncbp3	98	51.590	Stegastes_partitus
ENSCAFG00020008143	NCBP3	95	94.472	ENSSSCG00000017870	NCBP3	97	94.305	Sus_scrofa
ENSCAFG00020008143	NCBP3	95	79.299	ENSTGUG00000005396	NCBP3	97	79.967	Taeniopygia_guttata
ENSCAFG00020008143	NCBP3	95	52.751	ENSTRUG00000003769	ncbp3	98	53.083	Takifugu_rubripes
ENSCAFG00020008143	NCBP3	95	54.272	ENSTNIG00000004776	ncbp3	97	54.818	Tetraodon_nigroviridis
ENSCAFG00020008143	NCBP3	95	87.813	ENSTBEG00000006308	NCBP3	97	87.312	Tupaia_belangeri
ENSCAFG00020008143	NCBP3	95	88.275	ENSTTRG00000005845	NCBP3	97	87.772	Tursiops_truncatus
ENSCAFG00020008143	NCBP3	95	94.444	ENSUAMG00000014043	NCBP3	97	94.444	Ursus_americanus
ENSCAFG00020008143	NCBP3	85	97.656	ENSUMAG00000007519	NCBP3	100	97.656	Ursus_maritimus
ENSCAFG00020008143	NCBP3	100	99.340	ENSVVUG00000026079	NCBP3	100	99.340	Vulpes_vulpes
ENSCAFG00020008143	NCBP3	95	61.438	ENSXETG00000012965	ncbp3	97	62.684	Xenopus_tropicalis
ENSCAFG00020008143	NCBP3	95	49.224	ENSXCOG00000018393	ncbp3	98	50.232	Xiphophorus_couchianus
ENSCAFG00020008143	NCBP3	95	51.446	ENSXMAG00000006849	ncbp3	98	52.879	Xiphophorus_maculatus