EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020008202 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2227 bases
Position: chrQKWQ01001345.1:29618361-29620587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010094	RRM_1	PF00076.22	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020011724	-	390	-	ENSCAFP00020010094	129 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020008202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020008202	-	69	30.337	ENSCAFG00020007292	SRSF3	51	30.337
ENSCAFG00020008202	-	90	40.517	ENSCAFG00020017705	-	67	46.250
ENSCAFG00020008202	-	60	33.766	ENSCAFG00020022807	SRSF7	53	33.766
ENSCAFG00020008202	-	51	72.727	ENSCAFG00020025109	-	79	72.727
ENSCAFG00020008202	-	62	42.857	ENSCAFG00020021344	-	93	42.857
ENSCAFG00020008202	-	61	34.177	ENSCAFG00020002518	-	51	34.177
ENSCAFG00020008202	-	64	44.231	ENSCAFG00020006299	-	51	44.231
ENSCAFG00020008202	-	57	50.685	ENSCAFG00020020106	-	70	50.685
ENSCAFG00020008202	-	74	31.250	ENSCAFG00020013547	-	57	30.851
ENSCAFG00020008202	-	64	84.146	ENSCAFG00020024552	RBMXL1	78	82.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008202	-	64	84.146	ENSG00000147274	RBMX	82	82.812	Homo_sapiens
ENSCAFG00020008202	-	64	84.146	ENSG00000213516	RBMXL1	59	79.787	Homo_sapiens
ENSCAFG00020008202	-	50	78.125	ENSAMEG00000010565	-	89	78.125	Ailuropoda_melanoleuca
ENSCAFG00020008202	-	64	81.707	ENSANAG00000028483	-	71	79.104	Aotus_nancymaae
ENSCAFG00020008202	-	64	84.146	ENSANAG00000037179	-	83	82.609	Aotus_nancymaae
ENSCAFG00020008202	-	64	84.337	ENSANAG00000028304	RBMX	82	82.812	Aotus_nancymaae
ENSCAFG00020008202	-	50	81.250	ENSCJAG00000041629	-	72	81.250	Callithrix_jacchus
ENSCAFG00020008202	-	64	84.146	ENSCJAG00000040528	-	82	82.812	Callithrix_jacchus
ENSCAFG00020008202	-	64	84.146	ENSCPOG00000012164	RBMX	91	80.851	Cavia_porcellus
ENSCAFG00020008202	-	65	82.143	ENSCCAG00000037368	-	87	82.143	Cebus_capucinus
ENSCAFG00020008202	-	50	82.812	ENSCCAG00000036263	-	76	82.812	Cebus_capucinus
ENSCAFG00020008202	-	53	82.609	ENSCCAG00000028588	-	84	82.609	Cebus_capucinus
ENSCAFG00020008202	-	64	84.146	ENSCATG00000034355	-	82	82.812	Cercocebus_atys
ENSCAFG00020008202	-	57	72.973	ENSCATG00000032253	-	89	72.973	Cercocebus_atys
ENSCAFG00020008202	-	64	84.146	ENSCANG00000031609	-	82	82.812	Colobus_angolensis_palliatus
ENSCAFG00020008202	-	64	84.146	ENSCANG00000038825	-	80	74.359	Colobus_angolensis_palliatus
ENSCAFG00020008202	-	92	75.630	ENSCGRG00000001522	Rbmx	91	79.787	Cricetulus_griseus_crigri
ENSCAFG00020008202	-	74	80.000	ENSDORG00000015481	-	91	79.787	Dipodomys_ordii
ENSCAFG00020008202	-	54	81.429	ENSGGOG00000037578	-	81	81.429	Gorilla_gorilla
ENSCAFG00020008202	-	64	84.146	ENSHGLG00000011055	RBMX	91	79.787	Heterocephalus_glaber_female
ENSCAFG00020008202	-	57	73.973	ENSHGLG00000006125	-	51	73.973	Heterocephalus_glaber_female
ENSCAFG00020008202	-	64	84.146	ENSHGLG00100001361	-	91	79.787	Heterocephalus_glaber_male
ENSCAFG00020008202	-	61	59.494	ENSHGLG00100000887	-	86	59.494	Heterocephalus_glaber_male
ENSCAFG00020008202	-	68	72.727	ENSLAFG00000020807	-	65	70.833	Loxodonta_africana
ENSCAFG00020008202	-	64	84.337	ENSMFAG00000032479	RBMX	82	82.812	Macaca_fascicularis
ENSCAFG00020008202	-	64	84.146	ENSMMUG00000040370	-	59	79.545	Macaca_mulatta
ENSCAFG00020008202	-	64	84.337	ENSMNEG00000033588	-	82	82.812	Macaca_nemestrina
ENSCAFG00020008202	-	57	72.973	ENSMNEG00000027176	-	89	72.973	Macaca_nemestrina
ENSCAFG00020008202	-	59	76.316	ENSMLEG00000009623	-	90	76.316	Mandrillus_leucophaeus
ENSCAFG00020008202	-	64	84.337	ENSMLEG00000021095	-	82	82.812	Mandrillus_leucophaeus
ENSCAFG00020008202	-	67	65.909	ENSMICG00000030109	-	56	77.273	Microcebus_murinus
ENSCAFG00020008202	-	75	77.320	ENSMICG00000031444	-	80	82.812	Microcebus_murinus
ENSCAFG00020008202	-	53	81.159	ENSMOCG00000004335	-	87	81.159	Microtus_ochrogaster
ENSCAFG00020008202	-	74	80.000	MGP_CAROLIEiJ_G0033098	Rbmx	91	79.787	Mus_caroli
ENSCAFG00020008202	-	74	80.000	ENSMUSG00000031134	Rbmx	91	79.787	Mus_musculus
ENSCAFG00020008202	-	74	80.000	MGP_PahariEiJ_G0031641	Rbmx	91	79.787	Mus_pahari
ENSCAFG00020008202	-	74	80.000	MGP_SPRETEiJ_G0034253	Rbmx	91	79.787	Mus_spretus
ENSCAFG00020008202	-	83	77.570	ENSNGAG00000011475	-	58	71.795	Nannospalax_galili
ENSCAFG00020008202	-	50	84.375	ENSODEG00000005580	-	71	84.375	Octodon_degus
ENSCAFG00020008202	-	64	84.337	ENSPPAG00000028409	-	82	82.812	Pan_paniscus
ENSCAFG00020008202	-	57	70.270	ENSPPAG00000031010	-	88	70.270	Pan_paniscus
ENSCAFG00020008202	-	64	84.337	ENSPTRG00000052587	RBMX	82	82.812	Pan_troglodytes
ENSCAFG00020008202	-	64	84.337	ENSPANG00000018448	-	82	82.812	Papio_anubis
ENSCAFG00020008202	-	58	78.667	ENSPANG00000030653	-	89	79.730	Papio_anubis
ENSCAFG00020008202	-	53	71.014	ENSPCIG00000018117	-	70	71.014	Phascolarctos_cinereus
ENSCAFG00020008202	-	64	81.928	ENSPPYG00000019152	-	73	77.660	Pongo_abelii
ENSCAFG00020008202	-	50	82.812	ENSPCOG00000013607	-	82	82.812	Propithecus_coquereli
ENSCAFG00020008202	-	64	84.337	ENSRBIG00000042033	-	82	82.812	Rhinopithecus_bieti
ENSCAFG00020008202	-	61	70.886	ENSRBIG00000030841	-	96	70.886	Rhinopithecus_bieti
ENSCAFG00020008202	-	74	77.083	ENSRROG00000041167	-	82	82.812	Rhinopithecus_roxellana
ENSCAFG00020008202	-	67	68.182	ENSRROG00000034426	-	68	77.273	Rhinopithecus_roxellana
ENSCAFG00020008202	-	66	81.176	ENSSBOG00000026502	-	87	82.143	Saimiri_boliviensis_boliviensis
ENSCAFG00020008202	-	50	76.562	ENSUAMG00000002157	-	80	76.562	Ursus_americanus
ENSCAFG00020008202	-	89	96.522	ENSVVUG00000006841	-	58	96.522	Vulpes_vulpes