EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020008224 (Gene tree)
Gene ID: 112645833
Gene Symbol: AFF1
Alias: AF-4|AF4|MLLT2|PBM1
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 87267 bases
Position: chrQKWQ01002043.1:16041731-16128997
Accession: 7135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010134	AF-4	PF05110.13	0	1	2
ENSCAFP00020010134	AF-4	PF05110.13	0	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020011771	AFF1-201	3570	-	ENSCAFP00020010134	1189 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020008224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020008224	AFF1	66	58.333	ENSCAFG00020000956	AFF4	99	35.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008224	AFF1	56	55.405	ENSG00000144218	AFF3	77	55.263	Homo_sapiens
ENSCAFG00020008224	AFF1	75	35.245	ENSAMEG00000017764	AFF4	89	39.394	Ailuropoda_melanoleuca
ENSCAFG00020008224	AFF1	99	86.077	ENSAMEG00000003337	AFF1	99	85.831	Ailuropoda_melanoleuca
ENSCAFG00020008224	AFF1	99	52.262	ENSAPLG00000004059	AFF1	58	51.821	Anas_platyrhynchos
ENSCAFG00020008224	AFF1	60	50.551	ENSACAG00000012192	AFF1	58	49.654	Anolis_carolinensis
ENSCAFG00020008224	AFF1	77	37.155	ENSANAG00000037761	AFF4	99	36.222	Aotus_nancymaae
ENSCAFG00020008224	AFF1	96	75.980	ENSANAG00000017095	AFF1	99	76.039	Aotus_nancymaae
ENSCAFG00020008224	AFF1	53	61.667	ENSACLG00000002905	-	55	61.667	Astatotilapia_calliptera
ENSCAFG00020008224	AFF1	75	36.108	ENSBTAG00000009482	AFF4	89	40.152	Bos_taurus
ENSCAFG00020008224	AFF1	99	76.446	ENSCJAG00000006047	AFF1	99	76.194	Callithrix_jacchus
ENSCAFG00020008224	AFF1	77	37.580	ENSCJAG00000013322	AFF4	99	35.732	Callithrix_jacchus
ENSCAFG00020008224	AFF1	99	95.222	ENSCAFG00000009476	AFF1	99	95.222	Canis_familiaris
ENSCAFG00020008224	AFF1	60	35.270	ENSCAFG00000000930	AFF4	61	34.535	Canis_familiaris
ENSCAFG00020008224	AFF1	75	35.946	ENSCHIG00000015153	AFF4	61	33.472	Capra_hircus
ENSCAFG00020008224	AFF1	75	37.378	ENSTSYG00000014713	AFF4	99	35.667	Carlito_syrichta
ENSCAFG00020008224	AFF1	65	62.319	ENSCAPG00000013980	AFF4	88	36.127	Cavia_aperea
ENSCAFG00020008224	AFF1	77	36.881	ENSCCAG00000030353	AFF4	97	40.050	Cebus_capucinus
ENSCAFG00020008224	AFF1	99	77.038	ENSCCAG00000027623	AFF1	97	84.051	Cebus_capucinus
ENSCAFG00020008224	AFF1	80	35.765	ENSCATG00000044510	AFF4	99	35.420	Cercocebus_atys
ENSCAFG00020008224	AFF1	99	78.102	ENSCATG00000039501	AFF1	99	79.184	Cercocebus_atys
ENSCAFG00020008224	AFF1	50	43.051	ENSCHOG00000003138	AFF4	66	41.776	Choloepus_hoffmanni
ENSCAFG00020008224	AFF1	75	80.597	ENSCHOG00000000041	AFF1	79	80.628	Choloepus_hoffmanni
ENSCAFG00020008224	AFF1	76	34.271	ENSCPBG00000020831	AFF2	51	45.283	Chrysemys_picta_bellii
ENSCAFG00020008224	AFF1	99	65.548	ENSCGRG00001015769	Aff1	99	65.928	Cricetulus_griseus_chok1gshd
ENSCAFG00020008224	AFF1	75	37.726	ENSCGRG00001016680	Aff4	60	34.819	Cricetulus_griseus_chok1gshd
ENSCAFG00020008224	AFF1	70	65.970	ENSCGRG00000004837	Aff1	100	65.854	Cricetulus_griseus_crigri
ENSCAFG00020008224	AFF1	55	54.054	ENSCGRG00000003408	Aff3	73	54.054	Cricetulus_griseus_crigri
ENSCAFG00020008224	AFF1	75	35.959	ENSCGRG00000008529	Aff4	60	34.958	Cricetulus_griseus_crigri
ENSCAFG00020008224	AFF1	76	36.701	ENSCSEG00000017002	aff4	99	35.032	Cynoglossus_semilaevis
ENSCAFG00020008224	AFF1	75	35.722	ENSDNOG00000016669	AFF4	89	40.602	Dasypus_novemcinctus
ENSCAFG00020008224	AFF1	70	74.543	ENSDNOG00000048783	-	100	72.717	Dasypus_novemcinctus
ENSCAFG00020008224	AFF1	90	80.663	ENSETEG00000014905	AFF1	81	89.474	Echinops_telfairi
ENSCAFG00020008224	AFF1	99	77.950	ENSEASG00005012760	AFF1	99	77.136	Equus_asinus_asinus
ENSCAFG00020008224	AFF1	75	36.004	ENSEASG00005018361	AFF4	89	39.547	Equus_asinus_asinus
ENSCAFG00020008224	AFF1	99	77.543	ENSECAG00000003619	AFF1	99	77.217	Equus_caballus
ENSCAFG00020008224	AFF1	75	36.004	ENSECAG00000011969	AFF4	89	39.798	Equus_caballus
ENSCAFG00020008224	AFF1	62	44.882	ENSEEUG00000011214	AFF4	72	34.276	Erinaceus_europaeus
ENSCAFG00020008224	AFF1	66	95.000	ENSEEUG00000013664	-	74	95.000	Erinaceus_europaeus
ENSCAFG00020008224	AFF1	81	62.500	ENSELUG00000023871	aff4	85	61.538	Esox_lucius
ENSCAFG00020008224	AFF1	75	35.521	ENSFCAG00000012425	AFF4	89	39.646	Felis_catus
ENSCAFG00020008224	AFF1	99	85.280	ENSFCAG00000029806	AFF1	99	85.609	Felis_catus
ENSCAFG00020008224	AFF1	77	35.583	ENSFDAG00000005342	AFF4	60	33.014	Fukomys_damarensis
ENSCAFG00020008224	AFF1	99	45.860	ENSGALG00000043935	AFF1	99	45.352	Gallus_gallus
ENSCAFG00020008224	AFF1	75	36.632	ENSGALG00000030147	AFF4	60	35.684	Gallus_gallus
ENSCAFG00020008224	AFF1	99	30.848	ENSGACG00000016333	-	96	35.401	Gasterosteus_aculeatus
ENSCAFG00020008224	AFF1	76	37.360	ENSGACG00000020734	aff4	59	35.294	Gasterosteus_aculeatus
ENSCAFG00020008224	AFF1	60	32.927	ENSGGOG00000011786	AFF4	94	33.276	Gorilla_gorilla
ENSCAFG00020008224	AFF1	99	72.084	ENSGGOG00000008497	AFF1	99	76.835	Gorilla_gorilla
ENSCAFG00020008224	AFF1	77	35.342	ENSHGLG00000006661	AFF4	61	33.060	Heterocephalus_glaber_female
ENSCAFG00020008224	AFF1	77	36.239	ENSHGLG00100018576	AFF4	64	33.060	Heterocephalus_glaber_male
ENSCAFG00020008224	AFF1	81	62.500	ENSHCOG00000016280	aff4	65	62.500	Hippocampus_comes
ENSCAFG00020008224	AFF1	56	56.579	ENSSTOG00000012140	AFF3	68	56.757	Ictidomys_tridecemlineatus
ENSCAFG00020008224	AFF1	75	35.604	ENSSTOG00000026695	AFF4	59	58.333	Ictidomys_tridecemlineatus
ENSCAFG00020008224	AFF1	75	39.037	ENSJJAG00000000912	Aff4	99	36.415	Jaculus_jaculus
ENSCAFG00020008224	AFF1	99	69.162	ENSJJAG00000022877	Aff1	99	69.293	Jaculus_jaculus
ENSCAFG00020008224	AFF1	56	56.757	ENSJJAG00000013155	Aff3	73	56.757	Jaculus_jaculus
ENSCAFG00020008224	AFF1	99	45.607	ENSLACG00000007303	AFF1	99	45.687	Latimeria_chalumnae
ENSCAFG00020008224	AFF1	76	40.063	ENSLOCG00000004025	AFF1	63	35.734	Lepisosteus_oculatus
ENSCAFG00020008224	AFF1	84	43.511	ENSLAFG00000018691	AFF2	85	41.606	Loxodonta_africana
ENSCAFG00020008224	AFF1	80	35.736	ENSMFAG00000034615	AFF4	99	35.479	Macaca_fascicularis
ENSCAFG00020008224	AFF1	99	78.130	ENSMFAG00000037700	AFF1	100	79.215	Macaca_fascicularis
ENSCAFG00020008224	AFF1	80	35.679	ENSMMUG00000015640	AFF4	75	35.456	Macaca_mulatta
ENSCAFG00020008224	AFF1	99	77.395	ENSMMUG00000014076	AFF1	100	78.487	Macaca_mulatta
ENSCAFG00020008224	AFF1	80	36.954	ENSMNEG00000033381	AFF4	99	36.409	Macaca_nemestrina
ENSCAFG00020008224	AFF1	96	76.995	ENSMNEG00000031536	AFF1	99	77.406	Macaca_nemestrina
ENSCAFG00020008224	AFF1	80	36.954	ENSMLEG00000028953	AFF4	99	36.409	Mandrillus_leucophaeus
ENSCAFG00020008224	AFF1	99	33.522	ENSMAMG00000016189	-	69	37.736	Mastacembelus_armatus
ENSCAFG00020008224	AFF1	71	35.036	ENSMZEG00005020442	-	71	35.036	Maylandia_zebra
ENSCAFG00020008224	AFF1	75	37.526	ENSMGAG00000009144	AFF4	61	35.534	Meleagris_gallopavo
ENSCAFG00020008224	AFF1	99	45.783	ENSMGAG00000007646	AFF1	99	44.872	Meleagris_gallopavo
ENSCAFG00020008224	AFF1	76	47.887	ENSMAUG00000013669	Aff4	79	47.887	Mesocricetus_auratus
ENSCAFG00020008224	AFF1	75	39.258	ENSMICG00000002753	-	99	37.344	Microcebus_murinus
ENSCAFG00020008224	AFF1	99	53.710	ENSMODG00000020745	AFF1	97	52.984	Monodelphis_domestica
ENSCAFG00020008224	AFF1	67	59.701	ENSMALG00000017690	aff4	99	34.454	Monopterus_albus
ENSCAFG00020008224	AFF1	75	36.383	MGP_CAROLIEiJ_G0016331	Aff4	59	56.944	Mus_caroli
ENSCAFG00020008224	AFF1	65	69.565	MGP_CAROLIEiJ_G0027469	Aff1	90	70.153	Mus_caroli
ENSCAFG00020008224	AFF1	56	53.947	ENSMUSG00000037138	Aff3	62	54.054	Mus_musculus
ENSCAFG00020008224	AFF1	99	63.381	ENSMUSG00000029313	Aff1	99	62.901	Mus_musculus
ENSCAFG00020008224	AFF1	75	36.754	ENSMUSG00000049470	Aff4	59	56.944	Mus_musculus
ENSCAFG00020008224	AFF1	99	63.251	MGP_PahariEiJ_G0017247	Aff1	91	70.918	Mus_pahari
ENSCAFG00020008224	AFF1	75	36.632	MGP_PahariEiJ_G0017466	Aff4	59	56.944	Mus_pahari
ENSCAFG00020008224	AFF1	99	63.264	MGP_SPRETEiJ_G0028466	Aff1	91	70.153	Mus_spretus
ENSCAFG00020008224	AFF1	75	36.859	MGP_SPRETEiJ_G0017175	Aff4	59	56.944	Mus_spretus
ENSCAFG00020008224	AFF1	63	43.893	ENSMPUG00000011473	AFF2	55	42.529	Mustela_putorius_furo
ENSCAFG00020008224	AFF1	99	76.716	ENSMLUG00000000293	AFF1	99	76.307	Myotis_lucifugus
ENSCAFG00020008224	AFF1	56	55.263	ENSNGAG00000002408	Aff3	62	55.405	Nannospalax_galili
ENSCAFG00020008224	AFF1	99	76.278	ENSNLEG00000009429	AFF1	99	76.949	Nomascus_leucogenys
ENSCAFG00020008224	AFF1	80	36.529	ENSNLEG00000012874	AFF4	99	36.102	Nomascus_leucogenys
ENSCAFG00020008224	AFF1	81	52.614	ENSMEUG00000003076	-	81	51.803	Notamacropus_eugenii
ENSCAFG00020008224	AFF1	99	69.331	ENSOPRG00000017154	-	99	69.984	Ochotona_princeps
ENSCAFG00020008224	AFF1	77	36.545	ENSODEG00000008137	AFF4	99	34.887	Octodon_degus
ENSCAFG00020008224	AFF1	60	62.483	ENSOGAG00000031211	-	99	60.349	Otolemur_garnettii
ENSCAFG00020008224	AFF1	75	36.050	ENSOARG00000013406	AFF4	59	33.611	Ovis_aries
ENSCAFG00020008224	AFF1	99	76.495	ENSPPAG00000029196	AFF1	100	76.582	Pan_paniscus
ENSCAFG00020008224	AFF1	99	85.998	ENSPPRG00000023590	AFF1	99	85.915	Panthera_pardus
ENSCAFG00020008224	AFF1	75	35.625	ENSPPRG00000016213	AFF4	89	39.646	Panthera_pardus
ENSCAFG00020008224	AFF1	75	35.625	ENSPTIG00000016209	AFF4	89	39.646	Panthera_tigris_altaica
ENSCAFG00020008224	AFF1	82	87.967	ENSPTIG00000011838	AFF1	99	87.967	Panthera_tigris_altaica
ENSCAFG00020008224	AFF1	80	34.032	ENSPTRG00000017228	AFF4	78	34.755	Pan_troglodytes
ENSCAFG00020008224	AFF1	80	34.100	ENSPTRG00000046486	-	78	34.755	Pan_troglodytes
ENSCAFG00020008224	AFF1	99	76.495	ENSPTRG00000016255	AFF1	99	89.024	Pan_troglodytes
ENSCAFG00020008224	AFF1	98	74.811	ENSPANG00000016722	AFF1	99	75.903	Papio_anubis
ENSCAFG00020008224	AFF1	80	35.736	ENSPANG00000007039	AFF4	99	35.479	Papio_anubis
ENSCAFG00020008224	AFF1	64	56.061	ENSPKIG00000024325	AFF4	66	56.061	Paramormyrops_kingsleyae
ENSCAFG00020008224	AFF1	99	51.168	ENSPSIG00000003759	AFF1	90	55.087	Pelodiscus_sinensis
ENSCAFG00020008224	AFF1	59	33.424	ENSPMGG00000006477	aff4	77	41.736	Periophthalmus_magnuspinnatus
ENSCAFG00020008224	AFF1	75	36.111	ENSPEMG00000007995	Aff4	60	34.631	Peromyscus_maniculatus_bairdii
ENSCAFG00020008224	AFF1	55	54.815	ENSPEMG00000014802	Aff3	73	52.703	Peromyscus_maniculatus_bairdii
ENSCAFG00020008224	AFF1	93	82.143	ENSPCIG00000011395	AFF1	99	82.143	Phascolarctos_cinereus
ENSCAFG00020008224	AFF1	76	37.628	ENSPCIG00000000197	AFF4	89	38.084	Phascolarctos_cinereus
ENSCAFG00020008224	AFF1	73	92.500	ENSPCAG00000005658	AFF1	73	92.500	Procavia_capensis
ENSCAFG00020008224	AFF1	96	74.046	ENSPCOG00000027339	AFF1	97	73.791	Propithecus_coquereli
ENSCAFG00020008224	AFF1	75	36.677	ENSPCOG00000023876	AFF4	90	40.399	Propithecus_coquereli
ENSCAFG00020008224	AFF1	95	85.657	ENSPVAG00000014455	AFF1	95	85.657	Pteropus_vampyrus
ENSCAFG00020008224	AFF1	75	34.959	ENSPVAG00000015204	AFF4	89	39.695	Pteropus_vampyrus
ENSCAFG00020008224	AFF1	98	74.875	ENSRBIG00000032242	AFF1	99	76.835	Rhinopithecus_bieti
ENSCAFG00020008224	AFF1	60	35.047	ENSRBIG00000029376	AFF4	61	34.119	Rhinopithecus_bieti
ENSCAFG00020008224	AFF1	99	76.955	ENSRROG00000045716	AFF1	99	78.286	Rhinopithecus_roxellana
ENSCAFG00020008224	AFF1	80	35.421	ENSRROG00000033812	AFF4	91	33.518	Rhinopithecus_roxellana
ENSCAFG00020008224	AFF1	77	38.576	ENSSBOG00000021562	AFF4	99	39.364	Saimiri_boliviensis_boliviensis
ENSCAFG00020008224	AFF1	99	77.162	ENSSBOG00000035401	AFF1	99	77.414	Saimiri_boliviensis_boliviensis
ENSCAFG00020008224	AFF1	99	54.597	ENSSHAG00000004203	AFF1	99	53.921	Sarcophilus_harrisii
ENSCAFG00020008224	AFF1	60	36.971	ENSSHAG00000013198	AFF4	60	35.584	Sarcophilus_harrisii
ENSCAFG00020008224	AFF1	59	43.172	ENSSFOG00015009105	-	50	45.283	Scleropages_formosus
ENSCAFG00020008224	AFF1	82	59.701	ENSSFOG00015018646	aff4	66	59.701	Scleropages_formosus
ENSCAFG00020008224	AFF1	59	35.973	ENSSFOG00015000846	AFF4	89	32.966	Scleropages_formosus
ENSCAFG00020008224	AFF1	59	32.552	ENSSFOG00015004020	aff2	59	33.377	Scleropages_formosus
ENSCAFG00020008224	AFF1	99	33.412	ENSSMAG00000007062	-	91	35.714	Scophthalmus_maximus
ENSCAFG00020008224	AFF1	58	30.323	ENSSDUG00000023775	-	57	31.579	Seriola_dumerili
ENSCAFG00020008224	AFF1	56	51.297	ENSSARG00000013296	-	77	52.450	Sorex_araneus
ENSCAFG00020008224	AFF1	55	56.944	ENSSARG00000011190	AFF4	50	50.581	Sorex_araneus
ENSCAFG00020008224	AFF1	76	37.750	ENSSPUG00000012215	AFF4	99	35.294	Sphenodon_punctatus
ENSCAFG00020008224	AFF1	99	53.323	ENSSPUG00000001574	AFF1	99	52.941	Sphenodon_punctatus
ENSCAFG00020008224	AFF1	59	36.011	ENSSPAG00000012370	aff4	88	33.748	Stegastes_partitus
ENSCAFG00020008224	AFF1	75	36.495	ENSSSCG00000014291	AFF4	89	40.404	Sus_scrofa
ENSCAFG00020008224	AFF1	70	36.946	ENSTRUG00000014005	-	67	36.453	Takifugu_rubripes
ENSCAFG00020008224	AFF1	99	73.306	ENSTBEG00000007536	AFF1	100	73.061	Tupaia_belangeri
ENSCAFG00020008224	AFF1	75	35.319	ENSTTRG00000014729	AFF4	59	34.218	Tursiops_truncatus
ENSCAFG00020008224	AFF1	75	35.417	ENSUAMG00000025984	AFF4	89	39.394	Ursus_americanus
ENSCAFG00020008224	AFF1	99	78.535	ENSUMAG00000025433	AFF1	91	89.572	Ursus_maritimus
ENSCAFG00020008224	AFF1	66	58.333	ENSUMAG00000017952	AFF4	99	35.661	Ursus_maritimus
ENSCAFG00020008224	AFF1	75	36.184	ENSVVUG00000024524	AFF4	61	34.535	Vulpes_vulpes
ENSCAFG00020008224	AFF1	99	94.477	ENSVVUG00000009263	AFF1	99	94.229	Vulpes_vulpes
ENSCAFG00020008224	AFF1	78	44.697	ENSXETG00000019630	aff2	50	42.045	Xenopus_tropicalis
ENSCAFG00020008224	AFF1	60	32.577	ENSXCOG00000006385	aff4	55	36.977	Xiphophorus_couchianus