EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020008582 (Gene tree)
Gene ID: 112662101
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 7435 bases
Position: chrQKWQ01001454.1:8409511-8416945
Accession: 112662101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010575	PseudoU_synth_2	PF00849.22	1.4e-20	1	1
ENSCAFP00020010581	PseudoU_synth_2	PF00849.22	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020012283	RPUSD3-201	2381	-	ENSCAFP00020010575	329 (aa)	-	-
ENSCAFT00020012289	RPUSD3-202	2060	XM_025450455	ENSCAFP00020010581	352 (aa)	XP_025306240	UPI00004A61F4

Gene Model

Click here to download ENSCAFG00020008582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020008582	RPUSD3	86	32.432	ENSCAFG00020010621	RPUSD4	73	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008582	RPUSD3	100	80.398	ENSG00000156990	RPUSD3	100	80.398	Homo_sapiens
ENSCAFG00020008582	RPUSD3	100	90.909	ENSAMEG00000016227	RPUSD3	100	90.909	Ailuropoda_melanoleuca
ENSCAFG00020008582	RPUSD3	85	52.857	ENSACAG00000009836	RPUSD3	79	52.857	Anolis_carolinensis
ENSCAFG00020008582	RPUSD3	78	60.279	ENSANAG00000007127	-	98	60.069	Aotus_nancymaae
ENSCAFG00020008582	RPUSD3	60	80.303	ENSANAG00000019945	-	79	80.303	Aotus_nancymaae
ENSCAFG00020008582	RPUSD3	57	78.307	ENSANAG00000038118	-	90	78.307	Aotus_nancymaae
ENSCAFG00020008582	RPUSD3	98	80.523	ENSBTAG00000007968	RPUSD3	100	80.523	Bos_taurus
ENSCAFG00020008582	RPUSD3	100	100.000	ENSCAFG00000029733	RPUSD3	100	100.000	Canis_familiaris
ENSCAFG00020008582	RPUSD3	98	79.070	ENSCHIG00000026027	RPUSD3	100	79.070	Capra_hircus
ENSCAFG00020008582	RPUSD3	97	75.389	ENSTSYG00000009994	RPUSD3	99	74.138	Carlito_syrichta
ENSCAFG00020008582	RPUSD3	80	79.087	ENSCAPG00000017559	RPUSD3	99	79.087	Cavia_aperea
ENSCAFG00020008582	RPUSD3	80	78.788	ENSCPOG00000037956	RPUSD3	86	72.787	Cavia_porcellus
ENSCAFG00020008582	RPUSD3	100	77.841	ENSCCAG00000029530	RPUSD3	100	77.841	Cebus_capucinus
ENSCAFG00020008582	RPUSD3	100	79.545	ENSCATG00000036939	RPUSD3	100	79.545	Cercocebus_atys
ENSCAFG00020008582	RPUSD3	100	79.830	ENSCSAG00000010506	RPUSD3	100	79.830	Chlorocebus_sabaeus
ENSCAFG00020008582	RPUSD3	53	81.250	ENSCHOG00000010151	-	67	81.250	Choloepus_hoffmanni
ENSCAFG00020008582	RPUSD3	79	53.817	ENSCPBG00000008825	RPUSD3	97	52.672	Chrysemys_picta_bellii
ENSCAFG00020008582	RPUSD3	100	79.261	ENSCANG00000040711	RPUSD3	100	79.261	Colobus_angolensis_palliatus
ENSCAFG00020008582	RPUSD3	99	71.470	ENSCGRG00001004923	Rpusd3	96	71.470	Cricetulus_griseus_chok1gshd
ENSCAFG00020008582	RPUSD3	96	73.333	ENSCGRG00000018315	Rpusd3	99	71.848	Cricetulus_griseus_crigri
ENSCAFG00020008582	RPUSD3	99	72.934	ENSDNOG00000039160	RPUSD3	93	72.934	Dasypus_novemcinctus
ENSCAFG00020008582	RPUSD3	79	75.746	ENSDORG00000026827	Rpusd3	92	75.746	Dipodomys_ordii
ENSCAFG00020008582	RPUSD3	100	73.295	ENSETEG00000006538	RPUSD3	99	73.295	Echinops_telfairi
ENSCAFG00020008582	RPUSD3	62	39.512	ENSEBUG00000015605	RPUSD3	67	39.320	Eptatretus_burgeri
ENSCAFG00020008582	RPUSD3	100	82.386	ENSEASG00005014160	RPUSD3	98	82.386	Equus_asinus_asinus
ENSCAFG00020008582	RPUSD3	100	81.250	ENSECAG00000019988	RPUSD3	98	81.250	Equus_caballus
ENSCAFG00020008582	RPUSD3	97	57.349	ENSEEUG00000007353	RPUSD3	98	57.349	Erinaceus_europaeus
ENSCAFG00020008582	RPUSD3	100	90.057	ENSFCAG00000014199	RPUSD3	100	90.057	Felis_catus
ENSCAFG00020008582	RPUSD3	82	49.077	ENSFALG00000012968	RPUSD3	99	48.708	Ficedula_albicollis
ENSCAFG00020008582	RPUSD3	81	78.868	ENSFDAG00000008350	RPUSD3	82	78.868	Fukomys_damarensis
ENSCAFG00020008582	RPUSD3	80	56.274	ENSGAGG00000007493	RPUSD3	82	55.133	Gopherus_agassizii
ENSCAFG00020008582	RPUSD3	100	80.114	ENSGGOG00000013120	RPUSD3	100	80.114	Gorilla_gorilla
ENSCAFG00020008582	RPUSD3	90	75.932	ENSHGLG00000011722	RPUSD3	74	75.932	Heterocephalus_glaber_female
ENSCAFG00020008582	RPUSD3	90	75.932	ENSHGLG00100016038	RPUSD3	74	75.932	Heterocephalus_glaber_male
ENSCAFG00020008582	RPUSD3	100	74.716	ENSSTOG00000002125	RPUSD3	100	74.716	Ictidomys_tridecemlineatus
ENSCAFG00020008582	RPUSD3	98	71.512	ENSJJAG00000012679	Rpusd3	100	71.512	Jaculus_jaculus
ENSCAFG00020008582	RPUSD3	98	78.779	ENSLAFG00000017501	RPUSD3	100	78.779	Loxodonta_africana
ENSCAFG00020008582	RPUSD3	100	79.261	ENSMFAG00000032407	RPUSD3	100	79.261	Macaca_fascicularis
ENSCAFG00020008582	RPUSD3	97	80.878	ENSMMUG00000010628	RPUSD3	99	80.878	Macaca_mulatta
ENSCAFG00020008582	RPUSD3	100	78.977	ENSMNEG00000040308	RPUSD3	100	78.977	Macaca_nemestrina
ENSCAFG00020008582	RPUSD3	100	79.545	ENSMLEG00000033940	RPUSD3	100	79.545	Mandrillus_leucophaeus
ENSCAFG00020008582	RPUSD3	98	72.093	ENSMAUG00000015473	Rpusd3	100	72.093	Mesocricetus_auratus
ENSCAFG00020008582	RPUSD3	98	76.163	ENSMICG00000002315	RPUSD3	100	76.163	Microcebus_murinus
ENSCAFG00020008582	RPUSD3	97	71.384	ENSMOCG00000022613	Rpusd3	100	70.058	Microtus_ochrogaster
ENSCAFG00020008582	RPUSD3	98	56.232	ENSMODG00000005210	RPUSD3	90	56.395	Monodelphis_domestica
ENSCAFG00020008582	RPUSD3	98	70.930	MGP_CAROLIEiJ_G0028725	Rpusd3	100	70.930	Mus_caroli
ENSCAFG00020008582	RPUSD3	98	71.221	ENSMUSG00000051169	Rpusd3	100	71.221	Mus_musculus
ENSCAFG00020008582	RPUSD3	98	70.640	MGP_PahariEiJ_G0022476	Rpusd3	100	70.640	Mus_pahari
ENSCAFG00020008582	RPUSD3	98	71.221	MGP_SPRETEiJ_G0029753	Rpusd3	100	71.221	Mus_spretus
ENSCAFG00020008582	RPUSD3	100	88.920	ENSMPUG00000017132	RPUSD3	100	88.920	Mustela_putorius_furo
ENSCAFG00020008582	RPUSD3	98	83.188	ENSMLUG00000006135	RPUSD3	99	83.188	Myotis_lucifugus
ENSCAFG00020008582	RPUSD3	96	72.381	ENSNGAG00000023704	Rpusd3	99	70.381	Nannospalax_galili
ENSCAFG00020008582	RPUSD3	100	66.193	ENSNLEG00000004214	RPUSD3	96	80.976	Nomascus_leucogenys
ENSCAFG00020008582	RPUSD3	79	64.751	ENSMEUG00000013098	-	100	64.122	Notamacropus_eugenii
ENSCAFG00020008582	RPUSD3	97	62.899	ENSOPRG00000002300	RPUSD3	96	63.314	Ochotona_princeps
ENSCAFG00020008582	RPUSD3	80	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSCAFG00020008582	RPUSD3	86	49.296	ENSOANG00000012081	-	99	48.951	Ornithorhynchus_anatinus
ENSCAFG00020008582	RPUSD3	98	67.236	ENSOCUG00000027885	RPUSD3	100	67.236	Oryctolagus_cuniculus
ENSCAFG00020008582	RPUSD3	95	81.210	ENSOGAG00000012592	RPUSD3	100	81.210	Otolemur_garnettii
ENSCAFG00020008582	RPUSD3	99	80.627	ENSOARG00000005928	RPUSD3	99	80.627	Ovis_aries
ENSCAFG00020008582	RPUSD3	100	80.398	ENSPPAG00000038083	RPUSD3	100	80.398	Pan_paniscus
ENSCAFG00020008582	RPUSD3	100	88.920	ENSPPRG00000024433	RPUSD3	100	88.920	Panthera_pardus
ENSCAFG00020008582	RPUSD3	98	89.826	ENSPTIG00000006828	RPUSD3	100	89.826	Panthera_tigris_altaica
ENSCAFG00020008582	RPUSD3	100	80.114	ENSPTRG00000051760	RPUSD3	100	80.114	Pan_troglodytes
ENSCAFG00020008582	RPUSD3	100	80.114	ENSPANG00000023885	RPUSD3	100	80.114	Papio_anubis
ENSCAFG00020008582	RPUSD3	98	73.256	ENSPEMG00000017245	Rpusd3	100	73.256	Peromyscus_maniculatus_bairdii
ENSCAFG00020008582	RPUSD3	95	60.577	ENSPCIG00000021901	RPUSD3	96	58.876	Phascolarctos_cinereus
ENSCAFG00020008582	RPUSD3	100	80.398	ENSPPYG00000013676	RPUSD3	100	80.398	Pongo_abelii
ENSCAFG00020008582	RPUSD3	82	62.976	ENSPCAG00000013731	-	100	62.976	Procavia_capensis
ENSCAFG00020008582	RPUSD3	100	79.830	ENSPCOG00000018314	RPUSD3	100	79.830	Propithecus_coquereli
ENSCAFG00020008582	RPUSD3	100	78.693	ENSPVAG00000011107	RPUSD3	100	78.693	Pteropus_vampyrus
ENSCAFG00020008582	RPUSD3	98	67.442	ENSRNOG00000009084	Rpusd3	100	67.442	Rattus_norvegicus
ENSCAFG00020008582	RPUSD3	99	80.571	ENSRBIG00000041230	RPUSD3	99	80.571	Rhinopithecus_bieti
ENSCAFG00020008582	RPUSD3	99	80.571	ENSRROG00000043328	RPUSD3	99	80.571	Rhinopithecus_roxellana
ENSCAFG00020008582	RPUSD3	100	77.557	ENSSBOG00000036106	RPUSD3	100	77.557	Saimiri_boliviensis_boliviensis
ENSCAFG00020008582	RPUSD3	94	58.117	ENSSHAG00000015536	RPUSD3	99	58.117	Sarcophilus_harrisii
ENSCAFG00020008582	RPUSD3	100	79.261	ENSSSCG00000011555	RPUSD3	100	79.261	Sus_scrofa
ENSCAFG00020008582	RPUSD3	66	50.230	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSCAFG00020008582	RPUSD3	82	74.394	ENSTBEG00000000176	RPUSD3	100	74.394	Tupaia_belangeri
ENSCAFG00020008582	RPUSD3	100	82.386	ENSTTRG00000007544	RPUSD3	100	82.386	Tursiops_truncatus
ENSCAFG00020008582	RPUSD3	96	92.381	ENSUAMG00000011354	RPUSD3	98	92.381	Ursus_americanus
ENSCAFG00020008582	RPUSD3	100	90.625	ENSUMAG00000018830	RPUSD3	100	90.625	Ursus_maritimus
ENSCAFG00020008582	RPUSD3	98	97.093	ENSVVUG00000023735	RPUSD3	100	97.093	Vulpes_vulpes
ENSCAFG00020008582	RPUSD3	85	48.227	ENSXETG00000023546	rpusd3	99	48.227	Xenopus_tropicalis