EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020008689 (Gene tree)
Gene ID: 112646935
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 57497 bases
Position: chrQKWQ01002225.1:28904395-28961891
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010938	ResIII	PF04851.15	1.7e-07	1	1
ENSCAFP00020010937	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020012695	CHD5-201	6027	-	ENSCAFP00020010937	2008 (aa)	-	-
ENSCAFT00020012696	CHD5-202	5916	-	ENSCAFP00020010938	1971 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020008689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020008689	CHD5	73	77.082	ENSCAFG00020002892	-	96	73.002
ENSCAFG00020008689	CHD5	50	34.774	ENSCAFG00020012906	CHD6	88	40.691
ENSCAFG00020008689	CHD5	90	71.429	ENSCAFG00020007422	CHD3	98	70.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008689	CHD5	97	96.670	ENSG00000116254	CHD5	99	96.670	Homo_sapiens
ENSCAFG00020008689	CHD5	96	98.389	ENSAMEG00000009880	CHD5	100	98.389	Ailuropoda_melanoleuca
ENSCAFG00020008689	CHD5	91	79.022	ENSACIG00000012582	chd5	98	79.144	Amphilophus_citrinellus
ENSCAFG00020008689	CHD5	91	80.360	ENSAOCG00000020356	chd5	97	77.182	Amphiprion_ocellaris
ENSCAFG00020008689	CHD5	91	81.857	ENSAPLG00000015475	CHD5	99	81.582	Anas_platyrhynchos
ENSCAFG00020008689	CHD5	96	82.446	ENSACAG00000002441	CHD5	98	82.332	Anolis_carolinensis
ENSCAFG00020008689	CHD5	84	96.866	ENSANAG00000001078	CHD5	91	96.925	Aotus_nancymaae
ENSCAFG00020008689	CHD5	91	75.856	ENSACLG00000003012	chd5	96	75.801	Astatotilapia_calliptera
ENSCAFG00020008689	CHD5	84	82.482	ENSAMXG00000008921	chd5	98	82.016	Astyanax_mexicanus
ENSCAFG00020008689	CHD5	90	97.687	ENSBTAG00000040477	CHD5	99	97.687	Bos_taurus
ENSCAFG00020008689	CHD5	97	96.670	ENSCJAG00000000101	CHD5	99	96.670	Callithrix_jacchus
ENSCAFG00020008689	CHD5	90	100.000	ENSCAFG00000019545	CHD5	99	100.000	Canis_familiaris
ENSCAFG00020008689	CHD5	97	95.478	ENSCHIG00000015027	CHD5	99	94.088	Capra_hircus
ENSCAFG00020008689	CHD5	96	91.396	ENSTSYG00000033991	CHD5	99	91.753	Carlito_syrichta
ENSCAFG00020008689	CHD5	96	95.392	ENSCAPG00000009294	CHD5	99	95.385	Cavia_aperea
ENSCAFG00020008689	CHD5	96	95.392	ENSCPOG00000025080	CHD5	99	95.385	Cavia_porcellus
ENSCAFG00020008689	CHD5	97	96.568	ENSCCAG00000024756	CHD5	99	96.568	Cebus_capucinus
ENSCAFG00020008689	CHD5	97	95.902	ENSCATG00000043011	CHD5	99	95.902	Cercocebus_atys
ENSCAFG00020008689	CHD5	96	95.710	ENSCLAG00000010589	CHD5	99	95.703	Chinchilla_lanigera
ENSCAFG00020008689	CHD5	97	96.875	ENSCSAG00000000733	CHD5	99	96.875	Chlorocebus_sabaeus
ENSCAFG00020008689	CHD5	90	90.829	ENSCPBG00000019363	CHD5	99	90.719	Chrysemys_picta_bellii
ENSCAFG00020008689	CHD5	96	96.834	ENSCANG00000032302	CHD5	99	96.834	Colobus_angolensis_palliatus
ENSCAFG00020008689	CHD5	54	96.887	ENSCGRG00001011042	Chd5	100	96.887	Cricetulus_griseus_chok1gshd
ENSCAFG00020008689	CHD5	99	92.989	ENSCGRG00000011341	Chd5	99	94.907	Cricetulus_griseus_crigri
ENSCAFG00020008689	CHD5	91	67.810	ENSDARG00000025789	chd4b	96	68.127	Danio_rerio
ENSCAFG00020008689	CHD5	93	78.408	ENSDARG00000105083	chd5	97	81.067	Danio_rerio
ENSCAFG00020008689	CHD5	93	95.696	ENSDNOG00000046342	CHD5	99	91.496	Dasypus_novemcinctus
ENSCAFG00020008689	CHD5	96	95.537	ENSDORG00000005923	Chd5	99	95.530	Dipodomys_ordii
ENSCAFG00020008689	CHD5	99	94.973	ENSEASG00005021464	CHD5	99	94.973	Equus_asinus_asinus
ENSCAFG00020008689	CHD5	99	95.010	ENSECAG00000025043	CHD5	98	97.610	Equus_caballus
ENSCAFG00020008689	CHD5	75	99.061	ENSEEUG00000002772	CHD5	77	99.061	Erinaceus_europaeus
ENSCAFG00020008689	CHD5	91	77.673	ENSELUG00000010742	chd5	95	77.967	Esox_lucius
ENSCAFG00020008689	CHD5	97	98.819	ENSFCAG00000006319	CHD5	99	98.819	Felis_catus
ENSCAFG00020008689	CHD5	96	88.338	ENSFALG00000009740	CHD5	99	88.263	Ficedula_albicollis
ENSCAFG00020008689	CHD5	99	93.424	ENSFDAG00000012881	CHD5	98	93.640	Fukomys_damarensis
ENSCAFG00020008689	CHD5	97	87.385	ENSGALG00000000747	CHD5	99	87.232	Gallus_gallus
ENSCAFG00020008689	CHD5	55	82.904	ENSGACG00000004389	chd5	99	80.587	Gasterosteus_aculeatus
ENSCAFG00020008689	CHD5	93	87.940	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSCAFG00020008689	CHD5	96	96.675	ENSGGOG00000000708	CHD5	99	96.675	Gorilla_gorilla
ENSCAFG00020008689	CHD5	91	76.665	ENSHBUG00000013453	chd5	96	76.610	Haplochromis_burtoni
ENSCAFG00020008689	CHD5	97	95.352	ENSHGLG00000018184	CHD5	99	95.648	Heterocephalus_glaber_female
ENSCAFG00020008689	CHD5	98	87.255	ENSHGLG00100013261	CHD5	99	87.386	Heterocephalus_glaber_male
ENSCAFG00020008689	CHD5	91	79.206	ENSIPUG00000005446	chd5	98	79.443	Ictalurus_punctatus
ENSCAFG00020008689	CHD5	96	96.417	ENSSTOG00000002778	CHD5	99	96.398	Ictidomys_tridecemlineatus
ENSCAFG00020008689	CHD5	98	94.807	ENSJJAG00000019072	Chd5	99	95.236	Jaculus_jaculus
ENSCAFG00020008689	CHD5	93	82.770	ENSLOCG00000004944	chd5	98	80.869	Lepisosteus_oculatus
ENSCAFG00020008689	CHD5	96	96.836	ENSLAFG00000006348	CHD5	100	96.836	Loxodonta_africana
ENSCAFG00020008689	CHD5	96	96.732	ENSMFAG00000033993	CHD5	99	97.245	Macaca_fascicularis
ENSCAFG00020008689	CHD5	96	96.781	ENSMMUG00000016838	CHD5	99	96.781	Macaca_mulatta
ENSCAFG00020008689	CHD5	97	96.875	ENSMNEG00000040044	CHD5	99	96.875	Macaca_nemestrina
ENSCAFG00020008689	CHD5	96	93.439	ENSMLEG00000039166	CHD5	99	93.429	Mandrillus_leucophaeus
ENSCAFG00020008689	CHD5	91	75.741	ENSMZEG00005000841	chd5	96	75.714	Maylandia_zebra
ENSCAFG00020008689	CHD5	97	87.417	ENSMGAG00000001055	CHD5	99	87.519	Meleagris_gallopavo
ENSCAFG00020008689	CHD5	97	93.220	ENSMICG00000017862	CHD5	99	93.169	Microcebus_murinus
ENSCAFG00020008689	CHD5	97	94.778	ENSMOCG00000011049	Chd5	99	94.935	Microtus_ochrogaster
ENSCAFG00020008689	CHD5	88	80.618	ENSMODG00000006294	CHD5	81	94.573	Monodelphis_domestica
ENSCAFG00020008689	CHD5	91	79.203	ENSMALG00000002831	chd5	96	78.185	Monopterus_albus
ENSCAFG00020008689	CHD5	97	94.826	MGP_CAROLIEiJ_G0026857	Chd5	99	94.826	Mus_caroli
ENSCAFG00020008689	CHD5	97	94.526	ENSMUSG00000005045	Chd5	99	94.473	Mus_musculus
ENSCAFG00020008689	CHD5	97	94.726	MGP_PahariEiJ_G0029205	Chd5	99	94.726	Mus_pahari
ENSCAFG00020008689	CHD5	97	94.830	MGP_SPRETEiJ_G0027850	Chd5	99	94.830	Mus_spretus
ENSCAFG00020008689	CHD5	96	94.615	ENSMPUG00000007122	CHD5	99	97.791	Mustela_putorius_furo
ENSCAFG00020008689	CHD5	98	93.353	ENSNGAG00000019812	Chd5	99	93.384	Nannospalax_galili
ENSCAFG00020008689	CHD5	96	94.444	ENSNLEG00000010320	CHD5	99	94.225	Nomascus_leucogenys
ENSCAFG00020008689	CHD5	84	90.114	ENSOPRG00000004304	CHD5	87	89.922	Ochotona_princeps
ENSCAFG00020008689	CHD5	98	93.734	ENSODEG00000010262	CHD5	99	95.332	Octodon_degus
ENSCAFG00020008689	CHD5	90	78.680	ENSONIG00000000619	chd5	97	77.261	Oreochromis_niloticus
ENSCAFG00020008689	CHD5	93	73.203	ENSOANG00000001819	CHD5	98	73.323	Ornithorhynchus_anatinus
ENSCAFG00020008689	CHD5	97	94.629	ENSOGAG00000005703	CHD5	100	94.629	Otolemur_garnettii
ENSCAFG00020008689	CHD5	94	96.353	ENSOARG00000013425	CHD5	98	96.353	Ovis_aries
ENSCAFG00020008689	CHD5	96	96.729	ENSPPAG00000034048	CHD5	99	96.729	Pan_paniscus
ENSCAFG00020008689	CHD5	97	98.254	ENSPPRG00000009453	CHD5	99	98.254	Panthera_pardus
ENSCAFG00020008689	CHD5	96	90.681	ENSPTIG00000013926	CHD5	99	90.806	Panthera_tigris_altaica
ENSCAFG00020008689	CHD5	97	96.672	ENSPTRG00000000075	CHD5	99	96.672	Pan_troglodytes
ENSCAFG00020008689	CHD5	97	96.824	ENSPANG00000006765	CHD5	99	96.824	Papio_anubis
ENSCAFG00020008689	CHD5	91	79.297	ENSPKIG00000004282	chd5	98	78.697	Paramormyrops_kingsleyae
ENSCAFG00020008689	CHD5	93	82.854	ENSPSIG00000006414	CHD5	100	83.263	Pelodiscus_sinensis
ENSCAFG00020008689	CHD5	66	96.371	ENSPEMG00000014799	Chd5	99	96.285	Peromyscus_maniculatus_bairdii
ENSCAFG00020008689	CHD5	96	92.173	ENSPCIG00000028310	CHD5	99	90.262	Phascolarctos_cinereus
ENSCAFG00020008689	CHD5	91	77.325	ENSPLAG00000005343	chd5	93	85.417	Poecilia_latipinna
ENSCAFG00020008689	CHD5	96	93.490	ENSPPYG00000001952	CHD5	99	93.479	Pongo_abelii
ENSCAFG00020008689	CHD5	97	96.926	ENSPCOG00000022930	CHD5	99	96.926	Propithecus_coquereli
ENSCAFG00020008689	CHD5	91	78.289	ENSPNYG00000003183	chd5	98	78.213	Pundamilia_nyererei
ENSCAFG00020008689	CHD5	97	94.980	ENSRNOG00000011268	Chd5	99	94.877	Rattus_norvegicus
ENSCAFG00020008689	CHD5	98	91.654	ENSRBIG00000032140	CHD5	98	95.486	Rhinopithecus_bieti
ENSCAFG00020008689	CHD5	96	96.571	ENSRROG00000041146	CHD5	99	96.571	Rhinopithecus_roxellana
ENSCAFG00020008689	CHD5	97	92.068	ENSSBOG00000001955	CHD5	99	97.386	Saimiri_boliviensis_boliviensis
ENSCAFG00020008689	CHD5	94	86.340	ENSSHAG00000018641	CHD5	100	86.392	Sarcophilus_harrisii
ENSCAFG00020008689	CHD5	94	78.556	ENSSFOG00015006296	chd5	93	83.274	Scleropages_formosus
ENSCAFG00020008689	CHD5	91	79.324	ENSSDUG00000017526	chd5	97	78.155	Seriola_dumerili
ENSCAFG00020008689	CHD5	94	82.038	ENSSPUG00000010622	CHD5	99	80.982	Sphenodon_punctatus
ENSCAFG00020008689	CHD5	95	97.597	ENSSSCG00000003366	CHD5	99	97.796	Sus_scrofa
ENSCAFG00020008689	CHD5	90	84.887	ENSTGUG00000002634	-	100	84.937	Taeniopygia_guttata
ENSCAFG00020008689	CHD5	52	81.036	ENSTNIG00000004346	chd5	99	81.275	Tetraodon_nigroviridis
ENSCAFG00020008689	CHD5	97	95.221	ENSTTRG00000010468	CHD5	99	95.377	Tursiops_truncatus
ENSCAFG00020008689	CHD5	97	98.249	ENSUAMG00000024509	CHD5	100	98.249	Ursus_americanus
ENSCAFG00020008689	CHD5	95	93.874	ENSUMAG00000024173	CHD5	98	95.279	Ursus_maritimus
ENSCAFG00020008689	CHD5	100	97.860	ENSVVUG00000026480	CHD5	99	97.794	Vulpes_vulpes
ENSCAFG00020008689	CHD5	93	80.899	ENSXETG00000002904	chd5	100	80.424	Xenopus_tropicalis
ENSCAFG00020008689	CHD5	56	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus