EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020008891 (Gene tree)
Gene ID: 112640604
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 1958 bases
Position: chrQKWQ01001090.1:26820054-26822011
Accession: 112640604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020010986	PseudoU_synth_2	PF00849.22	3.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020012746	RPUSD1-201	982	-	ENSCAFP00020010986	302 (aa)	XP_025272892	UPI00004C0849

Gene Model

Click here to download ENSCAFG00020008891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020008891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020008891	RPUSD1	99	81.994	ENSG00000007376	RPUSD1	100	86.905	Homo_sapiens
ENSCAFG00020008891	RPUSD1	98	59.272	ENSAPOG00000022221	rpusd1	98	59.272	Acanthochromis_polyacanthus
ENSCAFG00020008891	RPUSD1	100	94.371	ENSAMEG00000007461	RPUSD1	100	94.371	Ailuropoda_melanoleuca
ENSCAFG00020008891	RPUSD1	98	57.190	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSCAFG00020008891	RPUSD1	98	57.705	ENSAOCG00000021975	rpusd1	95	57.049	Amphiprion_ocellaris
ENSCAFG00020008891	RPUSD1	98	58.033	ENSAPEG00000001316	rpusd1	95	57.377	Amphiprion_percula
ENSCAFG00020008891	RPUSD1	79	67.364	ENSATEG00000002984	rpusd1	98	57.377	Anabas_testudineus
ENSCAFG00020008891	RPUSD1	78	60.905	ENSAPLG00000012316	RPUSD1	99	60.905	Anas_platyrhynchos
ENSCAFG00020008891	RPUSD1	99	68.750	ENSACAG00000008953	RPUSD1	100	68.212	Anolis_carolinensis
ENSCAFG00020008891	RPUSD1	99	82.637	ENSANAG00000024709	RPUSD1	99	81.994	Aotus_nancymaae
ENSCAFG00020008891	RPUSD1	98	57.419	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSCAFG00020008891	RPUSD1	99	60.396	ENSAMXG00000019802	rpusd1	100	60.066	Astyanax_mexicanus
ENSCAFG00020008891	RPUSD1	100	86.039	ENSBTAG00000000179	RPUSD1	100	85.714	Bos_taurus
ENSCAFG00020008891	RPUSD1	99	82.315	ENSCJAG00000012253	RPUSD1	99	81.350	Callithrix_jacchus
ENSCAFG00020008891	RPUSD1	100	100.000	ENSCAFG00000019614	RPUSD1	100	100.000	Canis_familiaris
ENSCAFG00020008891	RPUSD1	100	85.714	ENSCHIG00000012872	RPUSD1	100	85.390	Capra_hircus
ENSCAFG00020008891	RPUSD1	99	82.724	ENSTSYG00000036934	RPUSD1	99	82.724	Carlito_syrichta
ENSCAFG00020008891	RPUSD1	100	83.333	ENSCAPG00000014219	RPUSD1	100	83.007	Cavia_aperea
ENSCAFG00020008891	RPUSD1	100	83.333	ENSCPOG00000034604	RPUSD1	100	83.007	Cavia_porcellus
ENSCAFG00020008891	RPUSD1	99	82.958	ENSCCAG00000034385	RPUSD1	99	81.994	Cebus_capucinus
ENSCAFG00020008891	RPUSD1	99	82.315	ENSCATG00000042983	RPUSD1	99	82.315	Cercocebus_atys
ENSCAFG00020008891	RPUSD1	100	83.007	ENSCLAG00000013966	RPUSD1	100	82.353	Chinchilla_lanigera
ENSCAFG00020008891	RPUSD1	99	82.958	ENSCSAG00000012121	RPUSD1	99	82.315	Chlorocebus_sabaeus
ENSCAFG00020008891	RPUSD1	99	65.789	ENSCPBG00000021101	RPUSD1	99	65.461	Chrysemys_picta_bellii
ENSCAFG00020008891	RPUSD1	90	85.978	ENSCANG00000028576	RPUSD1	96	86.245	Colobus_angolensis_palliatus
ENSCAFG00020008891	RPUSD1	100	82.895	ENSCGRG00001014253	Rpusd1	100	82.178	Cricetulus_griseus_chok1gshd
ENSCAFG00020008891	RPUSD1	100	82.895	ENSCGRG00000017995	Rpusd1	100	82.178	Cricetulus_griseus_crigri
ENSCAFG00020008891	RPUSD1	99	56.954	ENSCSEG00000018512	rpusd1	100	56.954	Cynoglossus_semilaevis
ENSCAFG00020008891	RPUSD1	98	58.667	ENSCVAG00000022746	rpusd1	98	58.000	Cyprinodon_variegatus
ENSCAFG00020008891	RPUSD1	99	63.000	ENSDARG00000060192	rpusd1	100	61.238	Danio_rerio
ENSCAFG00020008891	RPUSD1	100	82.468	ENSDNOG00000003721	RPUSD1	100	82.468	Dasypus_novemcinctus
ENSCAFG00020008891	RPUSD1	100	84.818	ENSDORG00000026656	Rpusd1	100	86.139	Dipodomys_ordii
ENSCAFG00020008891	RPUSD1	97	46.602	ENSEBUG00000008767	rpusd1	93	46.602	Eptatretus_burgeri
ENSCAFG00020008891	RPUSD1	100	84.810	ENSEASG00005018421	RPUSD1	76	84.810	Equus_asinus_asinus
ENSCAFG00020008891	RPUSD1	84	60.630	ENSELUG00000014307	rpusd1	88	53.770	Esox_lucius
ENSCAFG00020008891	RPUSD1	100	92.715	ENSFCAG00000010359	RPUSD1	100	92.715	Felis_catus
ENSCAFG00020008891	RPUSD1	99	66.887	ENSFALG00000003211	RPUSD1	100	66.887	Ficedula_albicollis
ENSCAFG00020008891	RPUSD1	100	83.333	ENSFDAG00000013398	RPUSD1	100	83.007	Fukomys_damarensis
ENSCAFG00020008891	RPUSD1	98	57.426	ENSFHEG00000004736	rpusd1	98	56.436	Fundulus_heteroclitus
ENSCAFG00020008891	RPUSD1	84	62.451	ENSGMOG00000010756	rpusd1	99	55.375	Gadus_morhua
ENSCAFG00020008891	RPUSD1	99	66.234	ENSGALG00000005315	RPUSD1	100	66.557	Gallus_gallus
ENSCAFG00020008891	RPUSD1	98	58.333	ENSGAFG00000009886	rpusd1	98	57.333	Gambusia_affinis
ENSCAFG00020008891	RPUSD1	96	55.921	ENSGACG00000014276	rpusd1	97	56.579	Gasterosteus_aculeatus
ENSCAFG00020008891	RPUSD1	99	65.789	ENSGAGG00000004181	RPUSD1	99	65.132	Gopherus_agassizii
ENSCAFG00020008891	RPUSD1	99	81.672	ENSGGOG00000013997	RPUSD1	99	80.707	Gorilla_gorilla
ENSCAFG00020008891	RPUSD1	98	57.097	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSCAFG00020008891	RPUSD1	100	83.333	ENSHGLG00000002595	RPUSD1	100	83.007	Heterocephalus_glaber_female
ENSCAFG00020008891	RPUSD1	100	83.333	ENSHGLG00100014303	RPUSD1	100	83.007	Heterocephalus_glaber_male
ENSCAFG00020008891	RPUSD1	98	57.576	ENSHCOG00000002390	rpusd1	99	57.576	Hippocampus_comes
ENSCAFG00020008891	RPUSD1	99	61.056	ENSIPUG00000001570	rpusd1	99	61.056	Ictalurus_punctatus
ENSCAFG00020008891	RPUSD1	100	83.987	ENSSTOG00000004276	RPUSD1	100	83.333	Ictidomys_tridecemlineatus
ENSCAFG00020008891	RPUSD1	100	83.987	ENSJJAG00000015696	Rpusd1	100	83.660	Jaculus_jaculus
ENSCAFG00020008891	RPUSD1	98	57.000	ENSKMAG00000017287	rpusd1	98	56.667	Kryptolebias_marmoratus
ENSCAFG00020008891	RPUSD1	98	56.066	ENSLBEG00000022502	rpusd1	98	56.066	Labrus_bergylta
ENSCAFG00020008891	RPUSD1	98	56.066	ENSLBEG00000013354	RPUSD1	98	56.066	Labrus_bergylta
ENSCAFG00020008891	RPUSD1	99	60.841	ENSLACG00000008869	RPUSD1	99	60.855	Latimeria_chalumnae
ENSCAFG00020008891	RPUSD1	72	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSCAFG00020008891	RPUSD1	99	85.382	ENSLAFG00000002115	RPUSD1	99	85.382	Loxodonta_africana
ENSCAFG00020008891	RPUSD1	99	82.637	ENSMFAG00000003961	RPUSD1	99	81.994	Macaca_fascicularis
ENSCAFG00020008891	RPUSD1	99	82.637	ENSMMUG00000000842	RPUSD1	99	81.994	Macaca_mulatta
ENSCAFG00020008891	RPUSD1	99	82.637	ENSMNEG00000042712	RPUSD1	99	81.994	Macaca_nemestrina
ENSCAFG00020008891	RPUSD1	99	82.637	ENSMLEG00000030591	RPUSD1	99	81.994	Mandrillus_leucophaeus
ENSCAFG00020008891	RPUSD1	84	65.613	ENSMAMG00000004735	rpusd1	98	58.170	Mastacembelus_armatus
ENSCAFG00020008891	RPUSD1	98	57.419	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSCAFG00020008891	RPUSD1	97	66.113	ENSMGAG00000005447	RPUSD1	99	67.114	Meleagris_gallopavo
ENSCAFG00020008891	RPUSD1	87	78.195	ENSMAUG00000019998	Rpusd1	100	78.195	Mesocricetus_auratus
ENSCAFG00020008891	RPUSD1	100	82.736	ENSMICG00000017561	RPUSD1	100	83.713	Microcebus_murinus
ENSCAFG00020008891	RPUSD1	99	84.590	ENSMOCG00000014082	Rpusd1	99	84.262	Microtus_ochrogaster
ENSCAFG00020008891	RPUSD1	98	57.770	ENSMMOG00000012569	rpusd1	99	58.108	Mola_mola
ENSCAFG00020008891	RPUSD1	100	70.550	ENSMODG00000016882	RPUSD1	100	70.874	Monodelphis_domestica
ENSCAFG00020008891	RPUSD1	98	56.209	ENSMALG00000017818	rpusd1	98	57.190	Monopterus_albus
ENSCAFG00020008891	RPUSD1	100	85.621	MGP_CAROLIEiJ_G0021244	Rpusd1	100	85.294	Mus_caroli
ENSCAFG00020008891	RPUSD1	100	85.621	ENSMUSG00000041199	Rpusd1	100	85.294	Mus_musculus
ENSCAFG00020008891	RPUSD1	99	84.918	MGP_PahariEiJ_G0023562	Rpusd1	99	84.590	Mus_pahari
ENSCAFG00020008891	RPUSD1	100	85.621	MGP_SPRETEiJ_G0022155	Rpusd1	100	85.294	Mus_spretus
ENSCAFG00020008891	RPUSD1	100	92.053	ENSMPUG00000015897	RPUSD1	100	92.053	Mustela_putorius_furo
ENSCAFG00020008891	RPUSD1	100	84.615	ENSMLUG00000001089	RPUSD1	100	84.244	Myotis_lucifugus
ENSCAFG00020008891	RPUSD1	100	83.660	ENSNGAG00000003595	Rpusd1	100	83.333	Nannospalax_galili
ENSCAFG00020008891	RPUSD1	98	58.983	ENSNBRG00000006457	rpusd1	98	58.983	Neolamprologus_brichardi
ENSCAFG00020008891	RPUSD1	54	79.310	ENSNLEG00000008424	-	99	78.736	Nomascus_leucogenys
ENSCAFG00020008891	RPUSD1	100	70.957	ENSMEUG00000016049	RPUSD1	100	70.957	Notamacropus_eugenii
ENSCAFG00020008891	RPUSD1	100	77.815	ENSOPRG00000008340	RPUSD1	100	77.152	Ochotona_princeps
ENSCAFG00020008891	RPUSD1	100	81.699	ENSODEG00000016945	RPUSD1	100	80.719	Octodon_degus
ENSCAFG00020008891	RPUSD1	98	56.452	ENSONIG00000015672	rpusd1	99	57.003	Oreochromis_niloticus
ENSCAFG00020008891	RPUSD1	99	58.609	ENSORLG00000013009	rpusd1	99	58.278	Oryzias_latipes
ENSCAFG00020008891	RPUSD1	99	58.278	ENSORLG00020010382	rpusd1	99	57.947	Oryzias_latipes_hni
ENSCAFG00020008891	RPUSD1	99	57.616	ENSORLG00015021354	rpusd1	99	57.285	Oryzias_latipes_hsok
ENSCAFG00020008891	RPUSD1	98	58.249	ENSOMEG00000021426	rpusd1	98	58.249	Oryzias_melastigma
ENSCAFG00020008891	RPUSD1	100	82.692	ENSOGAG00000003795	RPUSD1	100	82.692	Otolemur_garnettii
ENSCAFG00020008891	RPUSD1	100	85.390	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSCAFG00020008891	RPUSD1	99	81.672	ENSPPAG00000034797	RPUSD1	99	80.707	Pan_paniscus
ENSCAFG00020008891	RPUSD1	100	92.053	ENSPPRG00000012389	RPUSD1	100	92.053	Panthera_pardus
ENSCAFG00020008891	RPUSD1	100	92.053	ENSPTIG00000008545	RPUSD1	92	92.053	Panthera_tigris_altaica
ENSCAFG00020008891	RPUSD1	99	81.672	ENSPTRG00000007565	RPUSD1	99	80.707	Pan_troglodytes
ENSCAFG00020008891	RPUSD1	99	81.994	ENSPANG00000024401	RPUSD1	99	81.350	Papio_anubis
ENSCAFG00020008891	RPUSD1	99	60.855	ENSPKIG00000018890	rpusd1	91	60.855	Paramormyrops_kingsleyae
ENSCAFG00020008891	RPUSD1	99	66.885	ENSPSIG00000013945	RPUSD1	100	66.557	Pelodiscus_sinensis
ENSCAFG00020008891	RPUSD1	97	58.844	ENSPMGG00000014950	rpusd1	97	58.844	Periophthalmus_magnuspinnatus
ENSCAFG00020008891	RPUSD1	100	83.007	ENSPEMG00000000497	Rpusd1	100	82.353	Peromyscus_maniculatus_bairdii
ENSCAFG00020008891	RPUSD1	98	52.632	ENSPMAG00000001563	rpusd1	84	58.301	Petromyzon_marinus
ENSCAFG00020008891	RPUSD1	100	71.803	ENSPCIG00000021216	-	94	71.803	Phascolarctos_cinereus
ENSCAFG00020008891	RPUSD1	98	58.863	ENSPFOG00000007946	rpusd1	98	57.860	Poecilia_formosa
ENSCAFG00020008891	RPUSD1	98	58.863	ENSPLAG00000011925	rpusd1	98	57.525	Poecilia_latipinna
ENSCAFG00020008891	RPUSD1	98	58.528	ENSPMEG00000002910	rpusd1	98	57.525	Poecilia_mexicana
ENSCAFG00020008891	RPUSD1	98	59.000	ENSPREG00000019851	rpusd1	98	58.000	Poecilia_reticulata
ENSCAFG00020008891	RPUSD1	99	71.096	ENSPCAG00000002258	RPUSD1	99	70.764	Procavia_capensis
ENSCAFG00020008891	RPUSD1	100	83.974	ENSPCOG00000022582	RPUSD1	100	83.654	Propithecus_coquereli
ENSCAFG00020008891	RPUSD1	100	83.013	ENSPVAG00000013104	RPUSD1	100	82.051	Pteropus_vampyrus
ENSCAFG00020008891	RPUSD1	98	58.644	ENSPNYG00000024076	rpusd1	98	59.322	Pundamilia_nyererei
ENSCAFG00020008891	RPUSD1	99	59.532	ENSPNAG00000013806	rpusd1	100	58.863	Pygocentrus_nattereri
ENSCAFG00020008891	RPUSD1	100	84.967	ENSRNOG00000023639	Rpusd1	100	84.641	Rattus_norvegicus
ENSCAFG00020008891	RPUSD1	99	82.315	ENSRBIG00000030238	RPUSD1	99	81.350	Rhinopithecus_bieti
ENSCAFG00020008891	RPUSD1	99	82.315	ENSRROG00000036663	RPUSD1	99	81.350	Rhinopithecus_roxellana
ENSCAFG00020008891	RPUSD1	99	85.382	ENSSBOG00000033063	RPUSD1	99	85.382	Saimiri_boliviensis_boliviensis
ENSCAFG00020008891	RPUSD1	100	70.492	ENSSHAG00000013500	RPUSD1	100	70.492	Sarcophilus_harrisii
ENSCAFG00020008891	RPUSD1	99	61.130	ENSSFOG00015014394	rpusd1	99	61.130	Scleropages_formosus
ENSCAFG00020008891	RPUSD1	98	56.393	ENSSMAG00000008045	rpusd1	91	55.449	Scophthalmus_maximus
ENSCAFG00020008891	RPUSD1	84	66.798	ENSSDUG00000001829	rpusd1	95	59.344	Seriola_dumerili
ENSCAFG00020008891	RPUSD1	84	66.798	ENSSLDG00000020853	rpusd1	95	59.344	Seriola_lalandi_dorsalis
ENSCAFG00020008891	RPUSD1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSCAFG00020008891	RPUSD1	62	56.250	ENSSPUG00000005119	-	100	54.592	Sphenodon_punctatus
ENSCAFG00020008891	RPUSD1	98	58.033	ENSSPAG00000012708	rpusd1	98	58.361	Stegastes_partitus
ENSCAFG00020008891	RPUSD1	100	83.654	ENSSSCG00000008000	RPUSD1	99	86.770	Sus_scrofa
ENSCAFG00020008891	RPUSD1	84	74.902	ENSTGUG00000015375	RPUSD1	100	74.902	Taeniopygia_guttata
ENSCAFG00020008891	RPUSD1	98	57.190	ENSTRUG00000003041	rpusd1	98	57.190	Takifugu_rubripes
ENSCAFG00020008891	RPUSD1	98	55.405	ENSTNIG00000002660	rpusd1	99	55.405	Tetraodon_nigroviridis
ENSCAFG00020008891	RPUSD1	99	86.174	ENSTTRG00000010167	RPUSD1	99	85.852	Tursiops_truncatus
ENSCAFG00020008891	RPUSD1	100	95.364	ENSUAMG00000012736	RPUSD1	100	95.364	Ursus_americanus
ENSCAFG00020008891	RPUSD1	100	95.364	ENSUMAG00000021174	RPUSD1	100	95.364	Ursus_maritimus
ENSCAFG00020008891	RPUSD1	100	97.020	ENSVVUG00000012357	RPUSD1	100	97.020	Vulpes_vulpes
ENSCAFG00020008891	RPUSD1	100	61.513	ENSXETG00000007184	rpusd1	100	61.513	Xenopus_tropicalis
ENSCAFG00020008891	RPUSD1	98	58.667	ENSXCOG00000017930	rpusd1	98	57.333	Xiphophorus_couchianus
ENSCAFG00020008891	RPUSD1	98	58.000	ENSXMAG00000024084	rpusd1	98	57.000	Xiphophorus_maculatus