EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020009464 (Gene tree)
Gene ID: 112640483
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 34724 bases
Position: chrQKWQ01000410.1:24724836-24759559
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020011753	CMS1	PF14617.6	1.3e-33	1	1
ENSCAFP00020011753	DEAD	PF00270.29	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020013581	-	825	-	ENSCAFP00020011753	274 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020009464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020009464	-	84	91.379	ENSCAFG00020024156	-	76	87.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009464	-	95	90.347	ENSG00000184220	CMSS1	99	92.593	Homo_sapiens
ENSCAFG00020009464	-	74	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCAFG00020009464	-	94	92.664	ENSAMEG00000004092	CMSS1	99	93.023	Ailuropoda_melanoleuca
ENSCAFG00020009464	-	74	55.446	ENSACIG00000021854	cmss1	91	52.479	Amphilophus_citrinellus
ENSCAFG00020009464	-	74	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSCAFG00020009464	-	74	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSCAFG00020009464	-	82	60.965	ENSATEG00000008209	cmss1	83	60.166	Anabas_testudineus
ENSCAFG00020009464	-	84	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSCAFG00020009464	-	93	62.879	ENSACAG00000011065	CMSS1	97	62.879	Anolis_carolinensis
ENSCAFG00020009464	-	95	90.385	ENSANAG00000023565	CMSS1	98	90.698	Aotus_nancymaae
ENSCAFG00020009464	-	74	61.881	ENSACLG00000027294	cmss1	83	56.198	Astatotilapia_calliptera
ENSCAFG00020009464	-	73	55.000	ENSAMXG00000002046	cmss1	82	53.279	Astyanax_mexicanus
ENSCAFG00020009464	-	91	90.361	ENSBTAG00000013663	CMSS1	94	89.231	Bos_taurus
ENSCAFG00020009464	-	95	90.000	ENSCJAG00000000610	CMSS1	98	90.310	Callithrix_jacchus
ENSCAFG00020009464	-	95	98.846	ENSCAFG00000009230	CMSS1	94	98.846	Canis_familiaris
ENSCAFG00020009464	-	95	89.231	ENSCHIG00000013003	CMSS1	94	89.231	Capra_hircus
ENSCAFG00020009464	-	95	88.462	ENSTSYG00000009266	CMSS1	98	89.105	Carlito_syrichta
ENSCAFG00020009464	-	81	72.052	ENSCAPG00000013584	CMSS1	100	71.616	Cavia_aperea
ENSCAFG00020009464	-	95	88.417	ENSCPOG00000014680	CMSS1	93	88.417	Cavia_porcellus
ENSCAFG00020009464	-	95	91.538	ENSCCAG00000034685	CMSS1	98	91.860	Cebus_capucinus
ENSCAFG00020009464	-	94	90.698	ENSCATG00000031980	CMSS1	98	91.051	Cercocebus_atys
ENSCAFG00020009464	-	84	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSCAFG00020009464	-	89	91.429	ENSCSAG00000006024	CMSS1	100	91.429	Chlorocebus_sabaeus
ENSCAFG00020009464	-	94	71.984	ENSCHOG00000012098	CMSS1	93	71.984	Choloepus_hoffmanni
ENSCAFG00020009464	-	72	40.201	ENSCING00000014848	-	99	41.176	Ciona_intestinalis
ENSCAFG00020009464	-	95	90.347	ENSCANG00000031337	CMSS1	100	89.655	Colobus_angolensis_palliatus
ENSCAFG00020009464	-	95	82.239	ENSCGRG00001014305	Cmss1	93	82.239	Cricetulus_griseus_chok1gshd
ENSCAFG00020009464	-	93	83.203	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSCAFG00020009464	-	74	63.861	ENSCSEG00000004958	cmss1	69	63.861	Cynoglossus_semilaevis
ENSCAFG00020009464	-	74	61.881	ENSCVAG00000005039	cmss1	86	57.200	Cyprinodon_variegatus
ENSCAFG00020009464	-	82	52.814	ENSDARG00000112579	cmss1	84	50.407	Danio_rerio
ENSCAFG00020009464	-	96	87.121	ENSDNOG00000040418	CMSS1	93	87.739	Dasypus_novemcinctus
ENSCAFG00020009464	-	95	88.417	ENSDORG00000010461	Cmss1	93	88.417	Dipodomys_ordii
ENSCAFG00020009464	-	94	85.214	ENSEASG00005010966	CMSS1	99	93.151	Equus_asinus_asinus
ENSCAFG00020009464	-	94	89.883	ENSECAG00000015662	CMSS1	99	91.593	Equus_caballus
ENSCAFG00020009464	-	83	60.965	ENSEEUG00000007624	-	82	61.404	Erinaceus_europaeus
ENSCAFG00020009464	-	87	58.750	ENSELUG00000019459	cmss1	80	58.750	Esox_lucius
ENSCAFG00020009464	-	95	95.753	ENSFCAG00000044577	CMSS1	93	95.753	Felis_catus
ENSCAFG00020009464	-	86	63.713	ENSFALG00000005816	CMSS1	97	65.066	Ficedula_albicollis
ENSCAFG00020009464	-	83	92.105	ENSFDAG00000012577	CMSS1	100	92.105	Fukomys_damarensis
ENSCAFG00020009464	-	83	61.039	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSCAFG00020009464	-	74	62.376	ENSGMOG00000016729	cmss1	72	62.376	Gadus_morhua
ENSCAFG00020009464	-	86	68.220	ENSGALG00000015267	CMSS1	99	63.878	Gallus_gallus
ENSCAFG00020009464	-	76	62.802	ENSGAFG00000021217	cmss1	77	62.871	Gambusia_affinis
ENSCAFG00020009464	-	74	57.426	ENSGACG00000002798	cmss1	97	49.815	Gasterosteus_aculeatus
ENSCAFG00020009464	-	86	70.886	ENSGAGG00000019861	CMSS1	92	70.886	Gopherus_agassizii
ENSCAFG00020009464	-	94	90.698	ENSGGOG00000014125	CMSS1	98	91.051	Gorilla_gorilla
ENSCAFG00020009464	-	74	61.881	ENSHBUG00000008431	cmss1	85	56.017	Haplochromis_burtoni
ENSCAFG00020009464	-	92	87.352	ENSHGLG00000019481	CMSS1	100	87.352	Heterocephalus_glaber_female
ENSCAFG00020009464	-	94	87.549	ENSHGLG00100010314	CMSS1	100	87.549	Heterocephalus_glaber_male
ENSCAFG00020009464	-	80	65.297	ENSHCOG00000003222	cmss1	74	65.297	Hippocampus_comes
ENSCAFG00020009464	-	80	56.364	ENSIPUG00000011591	cmss1	90	51.515	Ictalurus_punctatus
ENSCAFG00020009464	-	95	92.278	ENSSTOG00000019366	CMSS1	93	92.278	Ictidomys_tridecemlineatus
ENSCAFG00020009464	-	95	86.486	ENSJJAG00000014894	Cmss1	90	92.574	Jaculus_jaculus
ENSCAFG00020009464	-	74	55.446	ENSKMAG00000002390	cmss1	81	55.446	Kryptolebias_marmoratus
ENSCAFG00020009464	-	74	59.606	ENSLBEG00000006298	cmss1	83	59.606	Labrus_bergylta
ENSCAFG00020009464	-	83	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSCAFG00020009464	-	82	57.709	ENSLOCG00000009391	cmss1	86	55.918	Lepisosteus_oculatus
ENSCAFG00020009464	-	83	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSCAFG00020009464	-	95	91.120	ENSMFAG00000045006	CMSS1	98	91.440	Macaca_fascicularis
ENSCAFG00020009464	-	95	90.734	ENSMMUG00000002939	CMSS1	98	92.273	Macaca_mulatta
ENSCAFG00020009464	-	95	90.734	ENSMNEG00000031315	CMSS1	98	91.051	Macaca_nemestrina
ENSCAFG00020009464	-	95	90.347	ENSMLEG00000033660	CMSS1	98	90.661	Mandrillus_leucophaeus
ENSCAFG00020009464	-	74	64.356	ENSMAMG00000017176	cmss1	83	58.506	Mastacembelus_armatus
ENSCAFG00020009464	-	74	61.881	ENSMZEG00005021886	cmss1	83	56.198	Maylandia_zebra
ENSCAFG00020009464	-	83	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCAFG00020009464	-	95	59.770	ENSMAUG00000020609	Cmss1	91	59.770	Mesocricetus_auratus
ENSCAFG00020009464	-	95	91.506	ENSMICG00000048977	CMSS1	98	91.829	Microcebus_murinus
ENSCAFG00020009464	-	95	82.625	ENSMOCG00000021937	Cmss1	93	82.625	Microtus_ochrogaster
ENSCAFG00020009464	-	74	61.881	ENSMMOG00000019794	cmss1	84	61.881	Mola_mola
ENSCAFG00020009464	-	95	75.472	ENSMODG00000002275	CMSS1	99	75.472	Monodelphis_domestica
ENSCAFG00020009464	-	88	59.016	ENSMALG00000004250	cmss1	69	65.347	Monopterus_albus
ENSCAFG00020009464	-	95	82.308	MGP_CAROLIEiJ_G0020824	Cmss1	93	82.308	Mus_caroli
ENSCAFG00020009464	-	95	83.462	ENSMUSG00000022748	Cmss1	93	83.462	Mus_musculus
ENSCAFG00020009464	-	95	81.923	MGP_PahariEiJ_G0016524	Cmss1	93	81.923	Mus_pahari
ENSCAFG00020009464	-	95	83.077	MGP_SPRETEiJ_G0021724	Cmss1	93	83.077	Mus_spretus
ENSCAFG00020009464	-	89	96.721	ENSMPUG00000011324	CMSS1	98	95.312	Mustela_putorius_furo
ENSCAFG00020009464	-	94	91.923	ENSMLUG00000001131	CMSS1	98	92.278	Myotis_lucifugus
ENSCAFG00020009464	-	94	87.209	ENSNGAG00000020316	Cmss1	92	87.549	Nannospalax_galili
ENSCAFG00020009464	-	74	61.386	ENSNBRG00000003095	cmss1	83	56.198	Neolamprologus_brichardi
ENSCAFG00020009464	-	95	92.278	ENSNLEG00000034172	CMSS1	98	92.607	Nomascus_leucogenys
ENSCAFG00020009464	-	83	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCAFG00020009464	-	94	91.440	ENSOPRG00000002986	CMSS1	92	91.440	Ochotona_princeps
ENSCAFG00020009464	-	95	88.803	ENSODEG00000005226	-	93	88.803	Octodon_degus
ENSCAFG00020009464	-	93	83.594	ENSODEG00000003558	-	91	83.594	Octodon_degus
ENSCAFG00020009464	-	88	74.793	ENSODEG00000009446	-	93	74.793	Octodon_degus
ENSCAFG00020009464	-	94	77.432	ENSODEG00000001853	-	92	77.432	Octodon_degus
ENSCAFG00020009464	-	74	61.881	ENSONIG00000006678	cmss1	93	56.198	Oreochromis_niloticus
ENSCAFG00020009464	-	93	72.308	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSCAFG00020009464	-	95	91.154	ENSOCUG00000025366	CMSS1	94	91.154	Oryctolagus_cuniculus
ENSCAFG00020009464	-	85	60.684	ENSORLG00000020340	cmss1	82	60.684	Oryzias_latipes
ENSCAFG00020009464	-	84	54.585	ENSORLG00020012235	cmss1	85	57.921	Oryzias_latipes_hni
ENSCAFG00020009464	-	74	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSCAFG00020009464	-	74	64.851	ENSOMEG00000012555	cmss1	97	52.669	Oryzias_melastigma
ENSCAFG00020009464	-	83	93.860	ENSOGAG00000002045	CMSS1	100	93.860	Otolemur_garnettii
ENSCAFG00020009464	-	94	89.922	ENSOARG00000017899	CMSS1	89	89.922	Ovis_aries
ENSCAFG00020009464	-	94	90.698	ENSPPAG00000038515	CMSS1	94	91.051	Pan_paniscus
ENSCAFG00020009464	-	95	94.595	ENSPPRG00000016767	CMSS1	93	94.595	Panthera_pardus
ENSCAFG00020009464	-	95	94.208	ENSPTIG00000018274	CMSS1	93	94.208	Panthera_tigris_altaica
ENSCAFG00020009464	-	95	89.961	ENSPTRG00000015157	CMSS1	100	91.020	Pan_troglodytes
ENSCAFG00020009464	-	94	87.597	ENSPANG00000019980	CMSS1	99	87.938	Papio_anubis
ENSCAFG00020009464	-	89	55.253	ENSPKIG00000012609	cmss1	99	55.556	Paramormyrops_kingsleyae
ENSCAFG00020009464	-	84	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSCAFG00020009464	-	74	62.562	ENSPMGG00000010286	cmss1	87	62.562	Periophthalmus_magnuspinnatus
ENSCAFG00020009464	-	95	83.398	ENSPEMG00000016384	Cmss1	93	83.398	Peromyscus_maniculatus_bairdii
ENSCAFG00020009464	-	74	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCAFG00020009464	-	94	74.615	ENSPCIG00000015656	CMSS1	98	74.615	Phascolarctos_cinereus
ENSCAFG00020009464	-	74	62.376	ENSPFOG00000016849	cmss1	71	62.376	Poecilia_formosa
ENSCAFG00020009464	-	74	61.881	ENSPLAG00000008323	cmss1	87	55.823	Poecilia_latipinna
ENSCAFG00020009464	-	74	62.376	ENSPMEG00000021020	cmss1	86	56.225	Poecilia_mexicana
ENSCAFG00020009464	-	89	56.000	ENSPREG00000007618	cmss1	84	56.225	Poecilia_reticulata
ENSCAFG00020009464	-	95	89.961	ENSPPYG00000013606	CMSS1	94	90.272	Pongo_abelii
ENSCAFG00020009464	-	95	92.278	ENSPCOG00000020035	CMSS1	98	92.607	Propithecus_coquereli
ENSCAFG00020009464	-	94	80.156	ENSPVAG00000017031	CMSS1	92	80.156	Pteropus_vampyrus
ENSCAFG00020009464	-	64	63.636	ENSPNYG00000013428	cmss1	79	56.944	Pundamilia_nyererei
ENSCAFG00020009464	-	96	47.902	ENSPNAG00000007912	cmss1	97	48.951	Pygocentrus_nattereri
ENSCAFG00020009464	-	93	82.879	ENSRNOG00000027888	Cmss1	99	82.879	Rattus_norvegicus
ENSCAFG00020009464	-	95	89.575	ENSRBIG00000037931	CMSS1	98	89.883	Rhinopithecus_bieti
ENSCAFG00020009464	-	95	89.575	ENSRROG00000042910	CMSS1	98	89.883	Rhinopithecus_roxellana
ENSCAFG00020009464	-	94	91.085	ENSSBOG00000030980	CMSS1	98	91.085	Saimiri_boliviensis_boliviensis
ENSCAFG00020009464	-	91	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSCAFG00020009464	-	82	60.435	ENSSFOG00015001509	cmss1	97	54.093	Scleropages_formosus
ENSCAFG00020009464	-	74	64.851	ENSSMAG00000001653	cmss1	69	64.851	Scophthalmus_maximus
ENSCAFG00020009464	-	82	60.262	ENSSDUG00000007719	cmss1	90	57.088	Seriola_dumerili
ENSCAFG00020009464	-	76	64.734	ENSSLDG00000012300	cmss1	88	55.189	Seriola_lalandi_dorsalis
ENSCAFG00020009464	-	95	74.131	ENSSARG00000003584	CMSS1	92	74.131	Sorex_araneus
ENSCAFG00020009464	-	82	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSCAFG00020009464	-	75	64.563	ENSSPAG00000019182	cmss1	82	54.851	Stegastes_partitus
ENSCAFG00020009464	-	97	91.321	ENSSSCG00000011970	CMSS1	95	91.321	Sus_scrofa
ENSCAFG00020009464	-	84	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSCAFG00020009464	-	74	62.376	ENSTRUG00000015265	cmss1	72	62.376	Takifugu_rubripes
ENSCAFG00020009464	-	74	55.446	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSCAFG00020009464	-	83	69.737	ENSTBEG00000016722	CMSS1	81	69.737	Tupaia_belangeri
ENSCAFG00020009464	-	95	89.189	ENSTTRG00000001562	CMSS1	93	89.189	Tursiops_truncatus
ENSCAFG00020009464	-	94	94.186	ENSUAMG00000024209	CMSS1	100	96.861	Ursus_americanus
ENSCAFG00020009464	-	95	93.436	ENSUMAG00000001983	CMSS1	99	93.798	Ursus_maritimus
ENSCAFG00020009464	-	83	77.632	ENSVPAG00000000263	CMSS1	82	77.632	Vicugna_pacos
ENSCAFG00020009464	-	82	96.903	ENSVVUG00000007776	-	89	96.903	Vulpes_vulpes
ENSCAFG00020009464	-	90	99.187	ENSVVUG00000021647	-	100	99.187	Vulpes_vulpes
ENSCAFG00020009464	-	96	55.556	ENSXETG00000011858	cmss1	97	55.556	Xenopus_tropicalis
ENSCAFG00020009464	-	76	62.019	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSCAFG00020009464	-	76	62.019	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus