EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020009484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 4412 bases
Position: chrQKWQ01001293.1:12543763-12548174
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020011775	Ribosomal_S27e	PF01667.17	1.2e-28	1	1
ENSCAFP00020011767	Ribosomal_S27e	PF01667.17	9e-20	1	1
ENSCAFP00020011768	Ribosomal_S27e	PF01667.17	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020013597	-	959	-	ENSCAFP00020011767	171 (aa)	-	-
ENSCAFT00020013598	-	1980	-	ENSCAFP00020011768	178 (aa)	-	-
ENSCAFT00020013605	-	2089	-	ENSCAFP00020011775	118 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020009484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020009484	-	64	93.333	ENSCAFG00020013338	-	96	93.333
ENSCAFG00020009484	-	67	86.076	ENSCAFG00020001079	-	94	86.076
ENSCAFG00020009484	-	67	91.139	ENSCAFG00020027228	-	94	91.139
ENSCAFG00020009484	-	58	97.059	ENSCAFG00020009238	-	68	94.595
ENSCAFG00020009484	-	67	91.139	ENSCAFG00020000543	-	81	91.139
ENSCAFG00020009484	-	64	71.084	ENSCAFG00020011742	-	87	68.966
ENSCAFG00020009484	-	67	87.342	ENSCAFG00020003365	-	94	87.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009484	-	65	74.026	ENSAPOG00000022298	-	57	74.026	Acanthochromis_polyacanthus
ENSCAFG00020009484	-	65	74.026	ENSAPOG00000021447	-	57	74.026	Acanthochromis_polyacanthus
ENSCAFG00020009484	-	69	91.463	ENSAMEG00000007270	-	85	91.463	Ailuropoda_melanoleuca
ENSCAFG00020009484	-	75	94.318	ENSANAG00000028244	-	91	94.318	Aotus_nancymaae
ENSCAFG00020009484	-	64	72.368	ENSACLG00000002121	-	84	72.368	Astatotilapia_calliptera
ENSCAFG00020009484	-	61	66.667	ENSCHIG00000022454	-	61	69.091	Capra_hircus
ENSCAFG00020009484	-	75	89.773	ENSCHOG00000006723	-	80	87.778	Choloepus_hoffmanni
ENSCAFG00020009484	-	64	94.737	ENSETEG00000001288	-	94	94.737	Echinops_telfairi
ENSCAFG00020009484	-	75	93.182	ENSMFAG00000039460	RPS27L	91	93.182	Macaca_fascicularis
ENSCAFG00020009484	-	75	93.182	ENSMMUG00000016350	RPS27L	91	93.182	Macaca_mulatta
ENSCAFG00020009484	-	64	72.368	ENSMZEG00005009272	-	84	72.368	Maylandia_zebra
ENSCAFG00020009484	-	67	98.734	ENSMICG00000007109	-	94	98.734	Microcebus_murinus
ENSCAFG00020009484	-	69	95.062	ENSOGAG00000002513	-	100	95.062	Otolemur_garnettii
ENSCAFG00020009484	-	75	93.182	ENSPPAG00000027359	-	91	93.182	Pan_paniscus
ENSCAFG00020009484	-	67	98.734	ENSPPRG00000023087	-	94	98.734	Panthera_pardus
ENSCAFG00020009484	-	75	93.182	ENSPTRG00000007144	-	91	93.182	Pan_troglodytes
ENSCAFG00020009484	-	75	93.182	ENSPANG00000034038	-	91	93.182	Papio_anubis
ENSCAFG00020009484	-	75	90.909	ENSPVAG00000009340	-	79	90.909	Pteropus_vampyrus
ENSCAFG00020009484	-	64	96.053	ENSSARG00000007919	-	80	96.053	Sorex_araneus
ENSCAFG00020009484	-	68	95.000	ENSTBEG00000008670	-	71	95.000	Tupaia_belangeri
ENSCAFG00020009484	-	75	90.909	ENSTTRG00000003776	-	78	90.909	Tursiops_truncatus
ENSCAFG00020009484	-	77	89.011	ENSVPAG00000005464	-	81	89.011	Vicugna_pacos