EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020009667 (Gene tree)
Gene ID: 112646952
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 13160 bases
Position: chrQKWQ01002225.1:30689144-30702303
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012090	B3_4	PF03483.17	1.4e-09	1	1
ENSCAFP00020012093	B3_4	PF03483.17	1.4e-09	1	1
ENSCAFP00020012079	B3_4	PF03483.17	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020013954	LRRC47-203	1755	-	ENSCAFP00020012093	584 (aa)	-	-
ENSCAFT00020013937	LRRC47-201	1800	-	ENSCAFP00020012079	599 (aa)	-	-
ENSCAFT00020013950	LRRC47-202	1737	-	ENSCAFP00020012090	578 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020009667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009667	LRRC47	100	84.391	ENSG00000130764	LRRC47	100	85.077	Homo_sapiens
ENSCAFG00020009667	LRRC47	99	53.927	ENSAPOG00000019553	lrrc47	99	54.276	Acanthochromis_polyacanthus
ENSCAFG00020009667	LRRC47	80	88.503	ENSAMEG00000009152	LRRC47	100	88.503	Ailuropoda_melanoleuca
ENSCAFG00020009667	LRRC47	67	66.321	ENSAPLG00000003167	LRRC47	100	64.767	Anas_platyrhynchos
ENSCAFG00020009667	LRRC47	66	67.546	ENSACAG00000008267	LRRC47	99	67.018	Anolis_carolinensis
ENSCAFG00020009667	LRRC47	100	83.705	ENSANAG00000025576	LRRC47	100	84.391	Aotus_nancymaae
ENSCAFG00020009667	LRRC47	99	85.017	ENSBTAG00000004738	LRRC47	100	84.391	Bos_taurus
ENSCAFG00020009667	LRRC47	99	99.307	ENSCAFG00000019492	LRRC47	100	99.660	Canis_familiaris
ENSCAFG00020009667	LRRC47	99	85.714	ENSCHIG00000022607	LRRC47	99	85.442	Capra_hircus
ENSCAFG00020009667	LRRC47	96	81.508	ENSTSYG00000009326	LRRC47	96	83.842	Carlito_syrichta
ENSCAFG00020009667	LRRC47	65	77.188	ENSCAPG00000016517	LRRC47	100	76.658	Cavia_aperea
ENSCAFG00020009667	LRRC47	99	82.404	ENSCPOG00000014931	LRRC47	96	81.475	Cavia_porcellus
ENSCAFG00020009667	LRRC47	100	84.391	ENSCCAG00000024895	LRRC47	100	85.077	Cebus_capucinus
ENSCAFG00020009667	LRRC47	100	84.734	ENSCATG00000029337	LRRC47	100	84.906	Cercocebus_atys
ENSCAFG00020009667	LRRC47	99	82.404	ENSCLAG00000006093	LRRC47	99	82.118	Chinchilla_lanigera
ENSCAFG00020009667	LRRC47	100	84.906	ENSCSAG00000000727	LRRC47	100	85.077	Chlorocebus_sabaeus
ENSCAFG00020009667	LRRC47	99	62.563	ENSCPBG00000019404	LRRC47	100	61.231	Chrysemys_picta_bellii
ENSCAFG00020009667	LRRC47	79	81.128	ENSCANG00000030701	LRRC47	96	80.911	Colobus_angolensis_palliatus
ENSCAFG00020009667	LRRC47	99	79.232	ENSCGRG00001015159	Lrrc47	91	78.045	Cricetulus_griseus_chok1gshd
ENSCAFG00020009667	LRRC47	66	71.842	ENSCGRG00000017336	Lrrc47	100	71.883	Cricetulus_griseus_crigri
ENSCAFG00020009667	LRRC47	99	52.797	ENSCSEG00000006217	lrrc47	96	53.103	Cynoglossus_semilaevis
ENSCAFG00020009667	LRRC47	65	76.064	ENSDORG00000016594	Lrrc47	99	76.064	Dipodomys_ordii
ENSCAFG00020009667	LRRC47	100	87.479	ENSEASG00005021788	LRRC47	100	87.479	Equus_asinus_asinus
ENSCAFG00020009667	LRRC47	99	87.805	ENSECAG00000022472	LRRC47	91	87.307	Equus_caballus
ENSCAFG00020009667	LRRC47	99	51.807	ENSELUG00000017544	lrrc47	97	51.635	Esox_lucius
ENSCAFG00020009667	LRRC47	94	90.441	ENSFCAG00000011632	LRRC47	97	89.693	Felis_catus
ENSCAFG00020009667	LRRC47	74	62.818	ENSFALG00000009631	LRRC47	99	61.556	Ficedula_albicollis
ENSCAFG00020009667	LRRC47	99	51.652	ENSGMOG00000015674	lrrc47	99	50.690	Gadus_morhua
ENSCAFG00020009667	LRRC47	99	61.274	ENSGALG00000050995	LRRC47	99	62.478	Gallus_gallus
ENSCAFG00020009667	LRRC47	99	53.497	ENSGACG00000005550	lrrc47	98	53.497	Gasterosteus_aculeatus
ENSCAFG00020009667	LRRC47	99	63.636	ENSGAGG00000022584	LRRC47	99	63.468	Gopherus_agassizii
ENSCAFG00020009667	LRRC47	100	84.563	ENSGGOG00000015571	LRRC47	100	85.249	Gorilla_gorilla
ENSCAFG00020009667	LRRC47	100	80.412	ENSHGLG00000018278	LRRC47	96	80.446	Heterocephalus_glaber_female
ENSCAFG00020009667	LRRC47	70	75.743	ENSHGLG00100008507	LRRC47	100	75.743	Heterocephalus_glaber_male
ENSCAFG00020009667	LRRC47	99	53.713	ENSHCOG00000006348	lrrc47	98	53.767	Hippocampus_comes
ENSCAFG00020009667	LRRC47	100	82.990	ENSSTOG00000027559	LRRC47	100	83.106	Ictidomys_tridecemlineatus
ENSCAFG00020009667	LRRC47	99	83.304	ENSJJAG00000017474	Lrrc47	97	81.990	Jaculus_jaculus
ENSCAFG00020009667	LRRC47	99	52.880	ENSKMAG00000003414	lrrc47	99	52.705	Kryptolebias_marmoratus
ENSCAFG00020009667	LRRC47	99	83.478	ENSLAFG00000011657	LRRC47	99	83.709	Loxodonta_africana
ENSCAFG00020009667	LRRC47	100	59.694	ENSMFAG00000045730	LRRC47	90	92.718	Macaca_fascicularis
ENSCAFG00020009667	LRRC47	99	85.217	ENSMNEG00000042488	LRRC47	100	84.589	Macaca_nemestrina
ENSCAFG00020009667	LRRC47	77	80.044	ENSMLEG00000043735	LRRC47	91	79.823	Mandrillus_leucophaeus
ENSCAFG00020009667	LRRC47	99	80.628	ENSMAUG00000021337	Lrrc47	97	80.279	Mesocricetus_auratus
ENSCAFG00020009667	LRRC47	100	82.646	ENSMICG00000026816	LRRC47	100	82.646	Microcebus_murinus
ENSCAFG00020009667	LRRC47	100	80.241	ENSMOCG00000021279	Lrrc47	100	80.928	Microtus_ochrogaster
ENSCAFG00020009667	LRRC47	99	53.484	ENSMMOG00000017007	lrrc47	99	53.659	Mola_mola
ENSCAFG00020009667	LRRC47	99	72.696	ENSMODG00000006554	LRRC47	100	71.502	Monodelphis_domestica
ENSCAFG00020009667	LRRC47	99	80.936	MGP_CAROLIEiJ_G0026864	Lrrc47	100	80.308	Mus_caroli
ENSCAFG00020009667	LRRC47	99	81.109	ENSMUSG00000029028	Lrrc47	100	80.479	Mus_musculus
ENSCAFG00020009667	LRRC47	99	80.488	MGP_PahariEiJ_G0029212	Lrrc47	99	80.763	Mus_pahari
ENSCAFG00020009667	LRRC47	99	81.109	MGP_SPRETEiJ_G0027857	Lrrc47	100	80.342	Mus_spretus
ENSCAFG00020009667	LRRC47	65	89.683	ENSMPUG00000007321	LRRC47	75	89.683	Mustela_putorius_furo
ENSCAFG00020009667	LRRC47	99	80.977	ENSNGAG00000022153	Lrrc47	99	82.322	Nannospalax_galili
ENSCAFG00020009667	LRRC47	100	81.818	ENSNLEG00000008131	LRRC47	100	81.647	Nomascus_leucogenys
ENSCAFG00020009667	LRRC47	99	78.980	ENSODEG00000010882	LRRC47	93	78.776	Octodon_degus
ENSCAFG00020009667	LRRC47	96	55.576	ENSORLG00000002532	lrrc47	99	55.676	Oryzias_latipes
ENSCAFG00020009667	LRRC47	99	55.923	ENSORLG00020019601	lrrc47	99	56.021	Oryzias_latipes_hni
ENSCAFG00020009667	LRRC47	99	55.401	ENSORLG00015014040	lrrc47	99	55.497	Oryzias_latipes_hsok
ENSCAFG00020009667	LRRC47	99	55.401	ENSOMEG00000008989	lrrc47	99	55.497	Oryzias_melastigma
ENSCAFG00020009667	LRRC47	100	82.504	ENSOGAG00000001553	LRRC47	100	83.019	Otolemur_garnettii
ENSCAFG00020009667	LRRC47	99	81.882	ENSOARG00000015290	LRRC47	100	81.304	Ovis_aries
ENSCAFG00020009667	LRRC47	98	81.733	ENSPPAG00000036370	-	100	79.551	Pan_paniscus
ENSCAFG00020009667	LRRC47	99	90.418	ENSPPRG00000005261	LRRC47	99	89.708	Panthera_pardus
ENSCAFG00020009667	LRRC47	100	84.391	ENSPTRG00000000068	LRRC47	100	85.077	Pan_troglodytes
ENSCAFG00020009667	LRRC47	100	84.734	ENSPANG00000012437	LRRC47	100	84.906	Papio_anubis
ENSCAFG00020009667	LRRC47	66	66.842	ENSPSIG00000004196	LRRC47	100	66.316	Pelodiscus_sinensis
ENSCAFG00020009667	LRRC47	65	75.332	ENSPEMG00000021068	Lrrc47	100	75.597	Peromyscus_maniculatus_bairdii
ENSCAFG00020009667	LRRC47	99	75.436	ENSPCIG00000003638	LRRC47	100	75.298	Phascolarctos_cinereus
ENSCAFG00020009667	LRRC47	94	54.797	ENSPFOG00000000992	lrrc47	93	54.613	Poecilia_formosa
ENSCAFG00020009667	LRRC47	99	54.895	ENSPLAG00000008077	lrrc47	99	54.720	Poecilia_latipinna
ENSCAFG00020009667	LRRC47	99	55.226	ENSPMEG00000007367	lrrc47	99	55.070	Poecilia_mexicana
ENSCAFG00020009667	LRRC47	100	84.563	ENSPPYG00000001960	LRRC47	100	85.249	Pongo_abelii
ENSCAFG00020009667	LRRC47	99	83.101	ENSPCOG00000019161	LRRC47	100	83.390	Propithecus_coquereli
ENSCAFG00020009667	LRRC47	100	84.589	ENSPVAG00000009839	LRRC47	100	84.391	Pteropus_vampyrus
ENSCAFG00020009667	LRRC47	99	53.425	ENSPNAG00000017982	lrrc47	99	53.253	Pygocentrus_nattereri
ENSCAFG00020009667	LRRC47	100	79.931	ENSRNOG00000024796	Lrrc47	100	80.617	Rattus_norvegicus
ENSCAFG00020009667	LRRC47	100	84.906	ENSRBIG00000019437	LRRC47	100	85.077	Rhinopithecus_bieti
ENSCAFG00020009667	LRRC47	100	84.906	ENSRROG00000043182	LRRC47	100	85.077	Rhinopithecus_roxellana
ENSCAFG00020009667	LRRC47	92	79.622	ENSSBOG00000026334	LRRC47	97	79.412	Saimiri_boliviensis_boliviensis
ENSCAFG00020009667	LRRC47	99	61.578	ENSSHAG00000007360	LRRC47	99	62.010	Sarcophilus_harrisii
ENSCAFG00020009667	LRRC47	99	55.095	ENSSMAG00000009344	lrrc47	99	55.846	Scophthalmus_maximus
ENSCAFG00020009667	LRRC47	99	53.752	ENSSDUG00000014618	lrrc47	99	54.450	Seriola_dumerili
ENSCAFG00020009667	LRRC47	99	54.625	ENSSLDG00000018908	lrrc47	99	54.450	Seriola_lalandi_dorsalis
ENSCAFG00020009667	LRRC47	99	61.709	ENSSPUG00000010277	LRRC47	99	61.176	Sphenodon_punctatus
ENSCAFG00020009667	LRRC47	99	55.148	ENSSPAG00000005188	lrrc47	99	55.497	Stegastes_partitus
ENSCAFG00020009667	LRRC47	100	85.592	ENSSSCG00000039516	LRRC47	100	85.592	Sus_scrofa
ENSCAFG00020009667	LRRC47	71	63.971	ENSTGUG00000002737	LRRC47	99	62.500	Taeniopygia_guttata
ENSCAFG00020009667	LRRC47	99	53.497	ENSTRUG00000017696	lrrc47	99	53.147	Takifugu_rubripes
ENSCAFG00020009667	LRRC47	99	52.972	ENSTNIG00000010923	lrrc47	98	52.797	Tetraodon_nigroviridis
ENSCAFG00020009667	LRRC47	100	84.563	ENSTTRG00000011751	LRRC47	100	84.563	Tursiops_truncatus
ENSCAFG00020009667	LRRC47	89	92.593	ENSUAMG00000012080	LRRC47	97	92.593	Ursus_americanus
ENSCAFG00020009667	LRRC47	66	91.601	ENSUMAG00000010781	LRRC47	81	91.601	Ursus_maritimus
ENSCAFG00020009667	LRRC47	100	90.017	ENSVVUG00000027118	LRRC47	94	93.478	Vulpes_vulpes
ENSCAFG00020009667	LRRC47	100	59.177	ENSXETG00000006029	lrrc47	99	59.177	Xenopus_tropicalis
ENSCAFG00020009667	LRRC47	99	55.401	ENSXCOG00000002813	lrrc47	98	55.401	Xiphophorus_couchianus
ENSCAFG00020009667	LRRC47	99	54.895	ENSXMAG00000019386	lrrc47	99	54.720	Xiphophorus_maculatus