EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020009728 (Gene tree)
Gene ID: 112677548
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 9207 bases
Position: chrQKWQ01001968.1:14741835-14751041
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012119	AARP2CN	PF08142.12	2.1e-21	1	1
ENSCAFP00020012107	AARP2CN	PF08142.12	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020013967	TSR1-201	2415	-	ENSCAFP00020012107	804 (aa)	-	-
ENSCAFT00020013980	TSR1-202	1116	-	ENSCAFP00020012119	371 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020009728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009728	TSR1	100	87.113	ENSG00000167721	TSR1	100	87.113	Homo_sapiens
ENSCAFG00020009728	TSR1	99	54.567	ENSAPOG00000020891	tsr1	99	55.048	Acanthochromis_polyacanthus
ENSCAFG00020009728	TSR1	100	91.646	ENSAMEG00000007599	TSR1	99	91.646	Ailuropoda_melanoleuca
ENSCAFG00020009728	TSR1	99	55.857	ENSACIG00000007090	tsr1	99	56.250	Amphilophus_citrinellus
ENSCAFG00020009728	TSR1	99	54.348	ENSAOCG00000023284	tsr1	99	55.072	Amphiprion_ocellaris
ENSCAFG00020009728	TSR1	94	55.128	ENSAPEG00000008452	tsr1	100	55.897	Amphiprion_percula
ENSCAFG00020009728	TSR1	99	53.555	ENSATEG00000021961	tsr1	99	55.276	Anabas_testudineus
ENSCAFG00020009728	TSR1	92	67.339	ENSAPLG00000013422	TSR1	100	67.608	Anas_platyrhynchos
ENSCAFG00020009728	TSR1	85	55.193	ENSACAG00000000859	TSR1	91	57.340	Anolis_carolinensis
ENSCAFG00020009728	TSR1	100	87.965	ENSANAG00000031071	TSR1	100	87.717	Aotus_nancymaae
ENSCAFG00020009728	TSR1	99	54.916	ENSACLG00000007595	tsr1	99	55.193	Astatotilapia_calliptera
ENSCAFG00020009728	TSR1	97	44.216	ENSAMXG00000008470	tsr1	95	46.813	Astyanax_mexicanus
ENSCAFG00020009728	TSR1	100	89.938	ENSBTAG00000004225	TSR1	100	89.938	Bos_taurus
ENSCAFG00020009728	TSR1	97	39.103	WBGene00006497	tag-151	96	39.576	Caenorhabditis_elegans
ENSCAFG00020009728	TSR1	100	87.578	ENSCJAG00000012456	TSR1	100	87.329	Callithrix_jacchus
ENSCAFG00020009728	TSR1	98	92.428	ENSCAFG00000019273	-	100	100.000	Canis_familiaris
ENSCAFG00020009728	TSR1	100	98.881	ENSCAFG00000002106	-	100	98.881	Canis_familiaris
ENSCAFG00020009728	TSR1	100	90.186	ENSCHIG00000023935	TSR1	100	90.186	Capra_hircus
ENSCAFG00020009728	TSR1	100	87.453	ENSTSYG00000005468	TSR1	100	87.329	Carlito_syrichta
ENSCAFG00020009728	TSR1	93	86.364	ENSCPOG00000014833	TSR1	99	86.364	Cavia_porcellus
ENSCAFG00020009728	TSR1	93	88.755	ENSCCAG00000028962	TSR1	98	88.487	Cebus_capucinus
ENSCAFG00020009728	TSR1	100	87.485	ENSCATG00000044262	TSR1	100	87.237	Cercocebus_atys
ENSCAFG00020009728	TSR1	100	86.087	ENSCLAG00000005567	TSR1	100	86.211	Chinchilla_lanigera
ENSCAFG00020009728	TSR1	100	87.485	ENSCSAG00000013788	TSR1	100	87.237	Chlorocebus_sabaeus
ENSCAFG00020009728	TSR1	99	67.915	ENSCPBG00000020363	TSR1	97	67.946	Chrysemys_picta_bellii
ENSCAFG00020009728	TSR1	97	46.183	ENSCING00000020658	-	99	46.269	Ciona_intestinalis
ENSCAFG00020009728	TSR1	97	45.535	ENSCSAVG00000001875	-	99	45.283	Ciona_savignyi
ENSCAFG00020009728	TSR1	100	80.248	ENSCANG00000033056	TSR1	100	79.851	Colobus_angolensis_palliatus
ENSCAFG00020009728	TSR1	100	84.080	ENSCGRG00001023942	Tsr1	100	85.360	Cricetulus_griseus_chok1gshd
ENSCAFG00020009728	TSR1	100	78.731	ENSCGRG00000013015	Tsr1	100	80.597	Cricetulus_griseus_crigri
ENSCAFG00020009728	TSR1	99	54.197	ENSCSEG00000013009	tsr1	99	55.127	Cynoglossus_semilaevis
ENSCAFG00020009728	TSR1	99	54.469	ENSCVAG00000000506	tsr1	99	54.733	Cyprinodon_variegatus
ENSCAFG00020009728	TSR1	99	53.661	ENSDARG00000007744	tsr1	99	54.212	Danio_rerio
ENSCAFG00020009728	TSR1	100	87.702	ENSDNOG00000004715	TSR1	100	89.165	Dasypus_novemcinctus
ENSCAFG00020009728	TSR1	97	74.036	ENSDORG00000023234	-	100	74.036	Dipodomys_ordii
ENSCAFG00020009728	TSR1	100	85.075	ENSDORG00000016371	-	100	85.075	Dipodomys_ordii
ENSCAFG00020009728	TSR1	97	43.527	FBgn0037073	Tsr1	96	44.444	Drosophila_melanogaster
ENSCAFG00020009728	TSR1	92	90.820	ENSETEG00000017534	TSR1	92	90.820	Echinops_telfairi
ENSCAFG00020009728	TSR1	95	52.926	ENSEBUG00000013731	TSR1	97	52.666	Eptatretus_burgeri
ENSCAFG00020009728	TSR1	100	90.932	ENSEASG00005009302	TSR1	97	90.932	Equus_asinus_asinus
ENSCAFG00020009728	TSR1	100	90.932	ENSECAG00000009114	TSR1	100	90.932	Equus_caballus
ENSCAFG00020009728	TSR1	99	54.251	ENSELUG00000020984	tsr1	95	54.348	Esox_lucius
ENSCAFG00020009728	TSR1	100	91.667	ENSFCAG00000006313	TSR1	100	91.667	Felis_catus
ENSCAFG00020009728	TSR1	99	67.448	ENSFALG00000006532	TSR1	99	68.103	Ficedula_albicollis
ENSCAFG00020009728	TSR1	100	86.708	ENSFDAG00000006038	TSR1	100	86.832	Fukomys_damarensis
ENSCAFG00020009728	TSR1	99	54.262	ENSFHEG00000003626	tsr1	99	54.447	Fundulus_heteroclitus
ENSCAFG00020009728	TSR1	99	52.020	ENSGMOG00000010336	tsr1	99	52.754	Gadus_morhua
ENSCAFG00020009728	TSR1	99	54.502	ENSGAFG00000012993	tsr1	99	54.831	Gambusia_affinis
ENSCAFG00020009728	TSR1	99	53.374	ENSGACG00000010843	tsr1	99	54.279	Gasterosteus_aculeatus
ENSCAFG00020009728	TSR1	99	67.794	ENSGAGG00000025619	-	99	68.773	Gopherus_agassizii
ENSCAFG00020009728	TSR1	93	45.640	ENSGAGG00000000440	-	98	45.640	Gopherus_agassizii
ENSCAFG00020009728	TSR1	100	86.989	ENSGGOG00000001704	TSR1	100	87.485	Gorilla_gorilla
ENSCAFG00020009728	TSR1	99	54.958	ENSHBUG00000017904	tsr1	100	55.811	Haplochromis_burtoni
ENSCAFG00020009728	TSR1	97	76.893	ENSHGLG00000015688	-	99	76.380	Heterocephalus_glaber_female
ENSCAFG00020009728	TSR1	100	87.329	ENSHGLG00000012806	-	100	87.329	Heterocephalus_glaber_female
ENSCAFG00020009728	TSR1	100	87.329	ENSHGLG00100015392	TSR1	100	87.329	Heterocephalus_glaber_male
ENSCAFG00020009728	TSR1	99	55.693	ENSHCOG00000001432	tsr1	99	55.817	Hippocampus_comes
ENSCAFG00020009728	TSR1	99	54.578	ENSIPUG00000004618	tsr1	99	55.422	Ictalurus_punctatus
ENSCAFG00020009728	TSR1	100	87.469	ENSSTOG00000011819	TSR1	100	87.469	Ictidomys_tridecemlineatus
ENSCAFG00020009728	TSR1	92	80.514	ENSJJAG00000019505	Tsr1	95	80.081	Jaculus_jaculus
ENSCAFG00020009728	TSR1	99	54.051	ENSKMAG00000005763	tsr1	99	54.172	Kryptolebias_marmoratus
ENSCAFG00020009728	TSR1	99	53.563	ENSLBEG00000021823	tsr1	99	55.168	Labrus_bergylta
ENSCAFG00020009728	TSR1	99	62.868	ENSLACG00000002197	TSR1	99	63.113	Latimeria_chalumnae
ENSCAFG00020009728	TSR1	90	57.801	ENSLOCG00000006491	TSR1	97	57.949	Lepisosteus_oculatus
ENSCAFG00020009728	TSR1	72	81.533	ENSLAFG00000022396	-	98	87.456	Loxodonta_africana
ENSCAFG00020009728	TSR1	100	87.732	ENSMFAG00000021330	TSR1	100	87.485	Macaca_fascicularis
ENSCAFG00020009728	TSR1	100	87.361	ENSMMUG00000017519	TSR1	100	87.113	Macaca_mulatta
ENSCAFG00020009728	TSR1	100	87.361	ENSMNEG00000031382	TSR1	100	87.113	Macaca_nemestrina
ENSCAFG00020009728	TSR1	100	87.361	ENSMLEG00000036733	TSR1	100	87.113	Mandrillus_leucophaeus
ENSCAFG00020009728	TSR1	99	54.426	ENSMAMG00000017918	tsr1	99	54.426	Mastacembelus_armatus
ENSCAFG00020009728	TSR1	99	55.317	ENSMZEG00005007477	tsr1	99	55.596	Maylandia_zebra
ENSCAFG00020009728	TSR1	99	66.954	ENSMGAG00000005576	TSR1	99	67.201	Meleagris_gallopavo
ENSCAFG00020009728	TSR1	100	89.814	ENSMICG00000012943	TSR1	100	89.814	Microcebus_murinus
ENSCAFG00020009728	TSR1	100	84.139	ENSMOCG00000022764	Tsr1	100	84.758	Microtus_ochrogaster
ENSCAFG00020009728	TSR1	99	54.568	ENSMMOG00000014280	tsr1	99	55.298	Mola_mola
ENSCAFG00020009728	TSR1	100	76.923	ENSMODG00000010658	TSR1	100	76.675	Monodelphis_domestica
ENSCAFG00020009728	TSR1	99	54.633	ENSMALG00000011681	tsr1	99	55.596	Monopterus_albus
ENSCAFG00020009728	TSR1	100	85.112	MGP_CAROLIEiJ_G0016727	Tsr1	100	84.739	Mus_caroli
ENSCAFG00020009728	TSR1	100	85.360	ENSMUSG00000038335	Tsr1	100	84.988	Mus_musculus
ENSCAFG00020009728	TSR1	100	85.484	MGP_PahariEiJ_G0017864	Tsr1	100	85.112	Mus_pahari
ENSCAFG00020009728	TSR1	100	85.484	MGP_SPRETEiJ_G0017570	Tsr1	100	85.112	Mus_spretus
ENSCAFG00020009728	TSR1	82	92.530	ENSMPUG00000013000	TSR1	100	92.530	Mustela_putorius_furo
ENSCAFG00020009728	TSR1	100	91.056	ENSMLUG00000003505	TSR1	100	91.056	Myotis_lucifugus
ENSCAFG00020009728	TSR1	99	79.459	ENSNGAG00000020455	-	99	79.459	Nannospalax_galili
ENSCAFG00020009728	TSR1	99	54.893	ENSNBRG00000020728	tsr1	99	54.928	Neolamprologus_brichardi
ENSCAFG00020009728	TSR1	100	80.348	ENSNLEG00000017184	TSR1	100	81.841	Nomascus_leucogenys
ENSCAFG00020009728	TSR1	100	70.683	ENSMEUG00000015828	TSR1	100	71.040	Notamacropus_eugenii
ENSCAFG00020009728	TSR1	99	55.102	ENSONIG00000013131	tsr1	99	55.127	Oreochromis_niloticus
ENSCAFG00020009728	TSR1	94	72.966	ENSOANG00000008637	TSR1	99	72.857	Ornithorhynchus_anatinus
ENSCAFG00020009728	TSR1	100	87.702	ENSOCUG00000014256	TSR1	100	87.702	Oryctolagus_cuniculus
ENSCAFG00020009728	TSR1	99	53.902	ENSORLG00000004926	tsr1	99	54.371	Oryzias_latipes
ENSCAFG00020009728	TSR1	99	53.966	ENSORLG00020008792	tsr1	99	54.436	Oryzias_latipes_hni
ENSCAFG00020009728	TSR1	99	53.661	ENSORLG00015013838	tsr1	99	54.491	Oryzias_latipes_hsok
ENSCAFG00020009728	TSR1	99	54.132	ENSOMEG00000004830	tsr1	99	54.644	Oryzias_melastigma
ENSCAFG00020009728	TSR1	100	85.837	ENSOGAG00000004492	TSR1	100	86.453	Otolemur_garnettii
ENSCAFG00020009728	TSR1	100	90.062	ENSOARG00000015437	TSR1	97	90.062	Ovis_aries
ENSCAFG00020009728	TSR1	100	87.237	ENSPPAG00000036355	TSR1	100	87.237	Pan_paniscus
ENSCAFG00020009728	TSR1	100	91.418	ENSPPRG00000015519	-	100	91.418	Panthera_pardus
ENSCAFG00020009728	TSR1	100	91.667	ENSPTIG00000010608	TSR1	100	91.667	Panthera_tigris_altaica
ENSCAFG00020009728	TSR1	100	87.237	ENSPTRG00000008547	TSR1	100	87.237	Pan_troglodytes
ENSCAFG00020009728	TSR1	100	84.387	ENSPANG00000024463	TSR1	100	84.263	Papio_anubis
ENSCAFG00020009728	TSR1	99	54.024	ENSPKIG00000013972	tsr1	99	54.024	Paramormyrops_kingsleyae
ENSCAFG00020009728	TSR1	88	66.432	ENSPSIG00000018258	TSR1	100	67.465	Pelodiscus_sinensis
ENSCAFG00020009728	TSR1	99	56.064	ENSPMGG00000011577	tsr1	99	56.064	Periophthalmus_magnuspinnatus
ENSCAFG00020009728	TSR1	100	84.367	ENSPEMG00000018033	Tsr1	100	84.119	Peromyscus_maniculatus_bairdii
ENSCAFG00020009728	TSR1	100	76.923	ENSPCIG00000009357	TSR1	98	77.132	Phascolarctos_cinereus
ENSCAFG00020009728	TSR1	99	54.313	ENSPFOG00000004483	TSR1	99	55.772	Poecilia_formosa
ENSCAFG00020009728	TSR1	99	54.244	ENSPLAG00000022320	tsr1	99	54.982	Poecilia_latipinna
ENSCAFG00020009728	TSR1	99	53.737	ENSPMEG00000004577	tsr1	99	54.502	Poecilia_mexicana
ENSCAFG00020009728	TSR1	97	53.724	ENSPREG00000010354	tsr1	95	54.803	Poecilia_reticulata
ENSCAFG00020009728	TSR1	100	79.361	ENSPPYG00000007792	TSR1	100	79.115	Pongo_abelii
ENSCAFG00020009728	TSR1	98	81.414	ENSPCAG00000012973	-	72	88.372	Procavia_capensis
ENSCAFG00020009728	TSR1	100	90.299	ENSPCOG00000017928	TSR1	100	90.299	Propithecus_coquereli
ENSCAFG00020009728	TSR1	100	89.565	ENSPVAG00000002162	TSR1	100	89.441	Pteropus_vampyrus
ENSCAFG00020009728	TSR1	99	55.036	ENSPNYG00000016163	tsr1	99	55.314	Pundamilia_nyererei
ENSCAFG00020009728	TSR1	99	52.732	ENSPNAG00000008659	tsr1	99	53.828	Pygocentrus_nattereri
ENSCAFG00020009728	TSR1	100	84.139	ENSRNOG00000002980	Tsr1	100	84.139	Rattus_norvegicus
ENSCAFG00020009728	TSR1	100	87.485	ENSRBIG00000040016	TSR1	100	87.237	Rhinopithecus_bieti
ENSCAFG00020009728	TSR1	100	87.485	ENSRROG00000030361	TSR1	100	87.237	Rhinopithecus_roxellana
ENSCAFG00020009728	TSR1	96	30.807	YDL060W	-	98	30.996	Saccharomyces_cerevisiae
ENSCAFG00020009728	TSR1	100	86.957	ENSSBOG00000020785	TSR1	100	87.329	Saimiri_boliviensis_boliviensis
ENSCAFG00020009728	TSR1	100	75.248	ENSSHAG00000011394	TSR1	100	74.969	Sarcophilus_harrisii
ENSCAFG00020009728	TSR1	99	55.922	ENSSFOG00015005455	tsr1	99	56.341	Scleropages_formosus
ENSCAFG00020009728	TSR1	99	52.644	ENSSMAG00000009504	tsr1	99	54.567	Scophthalmus_maximus
ENSCAFG00020009728	TSR1	99	53.919	ENSSDUG00000012074	tsr1	99	54.928	Seriola_dumerili
ENSCAFG00020009728	TSR1	99	54.167	ENSSLDG00000002031	tsr1	99	55.542	Seriola_lalandi_dorsalis
ENSCAFG00020009728	TSR1	98	77.225	ENSSARG00000000759	TSR1	100	74.410	Sorex_araneus
ENSCAFG00020009728	TSR1	99	65.806	ENSSPUG00000007042	TSR1	99	66.175	Sphenodon_punctatus
ENSCAFG00020009728	TSR1	99	53.413	ENSSPAG00000021951	tsr1	99	54.688	Stegastes_partitus
ENSCAFG00020009728	TSR1	100	90.559	ENSSSCG00000038534	TSR1	100	90.559	Sus_scrofa
ENSCAFG00020009728	TSR1	90	69.589	ENSTGUG00000005883	TSR1	100	70.123	Taeniopygia_guttata
ENSCAFG00020009728	TSR1	99	55.772	ENSTRUG00000004665	tsr1	99	55.932	Takifugu_rubripes
ENSCAFG00020009728	TSR1	99	55.569	ENSTNIG00000016196	tsr1	99	55.501	Tetraodon_nigroviridis
ENSCAFG00020009728	TSR1	80	83.249	ENSTBEG00000015275	-	67	92.308	Tupaia_belangeri
ENSCAFG00020009728	TSR1	100	90.062	ENSTTRG00000001177	TSR1	100	90.062	Tursiops_truncatus
ENSCAFG00020009728	TSR1	100	92.289	ENSUAMG00000025160	TSR1	99	92.878	Ursus_americanus
ENSCAFG00020009728	TSR1	95	93.971	ENSUMAG00000009294	TSR1	97	93.971	Ursus_maritimus
ENSCAFG00020009728	TSR1	98	84.031	ENSVPAG00000000228	TSR1	100	86.202	Vicugna_pacos
ENSCAFG00020009728	TSR1	100	97.886	ENSVVUG00000021767	TSR1	100	97.886	Vulpes_vulpes
ENSCAFG00020009728	TSR1	99	58.211	ENSXETG00000023797	tsr1	100	59.814	Xenopus_tropicalis
ENSCAFG00020009728	TSR1	99	54.957	ENSXCOG00000009635	tsr1	99	55.324	Xiphophorus_couchianus
ENSCAFG00020009728	TSR1	99	54.142	ENSXMAG00000001397	tsr1	96	54.710	Xiphophorus_maculatus