EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020009815 (Gene tree)
Gene ID: 112672949
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 3384 bases
Position: chrQKWQ01000452.1:8145984-8149367
Accession: 112672949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012258	RRM_1	PF00076.22	9.4e-14	1	1
ENSCAFP00020012248	RRM_1	PF00076.22	1.5e-13	1	1
ENSCAFP00020012258	FYTT	PF07078.11	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020014131	ALYREF-201	774	-	ENSCAFP00020012248	257 (aa)	XP_025324116	UPI000274853D
ENSCAFT00020014143	ALYREF-202	609	-	ENSCAFP00020012258	202 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020009815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009815	ALYREF	100	97.276	ENSG00000183684	ALYREF	97	97.276	Homo_sapiens
ENSCAFG00020009815	ALYREF	100	68.345	ENSAPOG00000018455	ALYREF	100	72.302	Acanthochromis_polyacanthus
ENSCAFG00020009815	ALYREF	80	88.095	ENSAMEG00000017463	ALYREF	74	93.478	Ailuropoda_melanoleuca
ENSCAFG00020009815	ALYREF	100	76.336	ENSACAG00000010526	ALYREF	100	74.809	Anolis_carolinensis
ENSCAFG00020009815	ALYREF	69	95.480	ENSANAG00000022638	-	75	95.480	Aotus_nancymaae
ENSCAFG00020009815	ALYREF	100	82.101	ENSANAG00000028229	-	78	82.879	Aotus_nancymaae
ENSCAFG00020009815	ALYREF	100	99.222	ENSBTAG00000008498	ALYREF	100	99.222	Bos_taurus
ENSCAFG00020009815	ALYREF	100	96.498	ENSCJAG00000039942	ALYREF	97	96.498	Callithrix_jacchus
ENSCAFG00020009815	ALYREF	100	100.000	ENSCAFG00000005877	ALYREF	100	100.000	Canis_familiaris
ENSCAFG00020009815	ALYREF	100	98.450	ENSCHIG00000017396	ALYREF	97	98.450	Capra_hircus
ENSCAFG00020009815	ALYREF	88	82.684	ENSTSYG00000002272	ALYREF	69	98.286	Carlito_syrichta
ENSCAFG00020009815	ALYREF	52	97.761	ENSCAPG00000014727	-	100	97.761	Cavia_aperea
ENSCAFG00020009815	ALYREF	100	97.276	ENSCPOG00000013710	ALYREF	100	97.276	Cavia_porcellus
ENSCAFG00020009815	ALYREF	100	96.887	ENSCCAG00000020578	-	97	96.887	Cebus_capucinus
ENSCAFG00020009815	ALYREF	100	78.281	ENSCCAG00000030237	-	100	76.471	Cebus_capucinus
ENSCAFG00020009815	ALYREF	100	98.054	ENSCATG00000033169	ALYREF	97	98.054	Cercocebus_atys
ENSCAFG00020009815	ALYREF	100	89.105	ENSCLAG00000015026	ALYREF	100	89.105	Chinchilla_lanigera
ENSCAFG00020009815	ALYREF	100	98.054	ENSCSAG00000002216	ALYREF	97	98.054	Chlorocebus_sabaeus
ENSCAFG00020009815	ALYREF	70	94.475	ENSCANG00000034056	ALYREF	89	88.136	Colobus_angolensis_palliatus
ENSCAFG00020009815	ALYREF	100	93.774	ENSCGRG00001018191	-	100	91.440	Cricetulus_griseus_chok1gshd
ENSCAFG00020009815	ALYREF	74	91.623	ENSCGRG00000015871	-	90	86.559	Cricetulus_griseus_crigri
ENSCAFG00020009815	ALYREF	79	53.804	ENSCSEG00000015438	-	98	58.152	Cynoglossus_semilaevis
ENSCAFG00020009815	ALYREF	69	97.191	ENSDNOG00000002563	ALYREF	75	97.191	Dasypus_novemcinctus
ENSCAFG00020009815	ALYREF	88	83.111	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSCAFG00020009815	ALYREF	69	96.067	ENSETEG00000016596	ALYREF	100	94.944	Echinops_telfairi
ENSCAFG00020009815	ALYREF	100	98.833	ENSEASG00005005824	ALYREF	95	98.833	Equus_asinus_asinus
ENSCAFG00020009815	ALYREF	100	98.833	ENSECAG00000018754	ALYREF	95	98.833	Equus_caballus
ENSCAFG00020009815	ALYREF	67	95.930	ENSEEUG00000010164	ALYREF	100	94.767	Erinaceus_europaeus
ENSCAFG00020009815	ALYREF	100	98.833	ENSFCAG00000022549	ALYREF	98	98.833	Felis_catus
ENSCAFG00020009815	ALYREF	83	87.442	ENSFDAG00000001213	ALYREF	93	87.864	Fukomys_damarensis
ENSCAFG00020009815	ALYREF	100	84.170	ENSGALG00000007237	ALYREF	100	83.398	Gallus_gallus
ENSCAFG00020009815	ALYREF	100	70.943	ENSGACG00000013328	ALYREF	100	71.805	Gasterosteus_aculeatus
ENSCAFG00020009815	ALYREF	100	83.588	ENSGAGG00000008536	ALYREF	100	82.443	Gopherus_agassizii
ENSCAFG00020009815	ALYREF	100	97.665	ENSGGOG00000013935	ALYREF	99	96.899	Gorilla_gorilla
ENSCAFG00020009815	ALYREF	100	96.887	ENSHGLG00000008293	ALYREF	100	96.887	Heterocephalus_glaber_female
ENSCAFG00020009815	ALYREF	81	82.379	ENSHGLG00100006949	ALYREF	77	96.133	Heterocephalus_glaber_male
ENSCAFG00020009815	ALYREF	100	68.539	ENSHCOG00000015046	ALYREF	100	69.853	Hippocampus_comes
ENSCAFG00020009815	ALYREF	100	93.774	ENSJJAG00000004134	-	100	93.774	Jaculus_jaculus
ENSCAFG00020009815	ALYREF	100	71.212	ENSLACG00000005694	ALYREF	100	72.348	Latimeria_chalumnae
ENSCAFG00020009815	ALYREF	73	96.809	ENSLAFG00000003083	ALYREF	98	95.109	Loxodonta_africana
ENSCAFG00020009815	ALYREF	100	95.331	ENSMFAG00000001394	ALYREF	97	95.331	Macaca_fascicularis
ENSCAFG00020009815	ALYREF	100	98.054	ENSMMUG00000012884	ALYREF	97	98.054	Macaca_mulatta
ENSCAFG00020009815	ALYREF	100	98.054	ENSMNEG00000043666	ALYREF	97	98.054	Macaca_nemestrina
ENSCAFG00020009815	ALYREF	78	81.111	ENSMLEG00000043353	ALYREF	82	88.268	Mandrillus_leucophaeus
ENSCAFG00020009815	ALYREF	100	79.767	ENSMAUG00000020552	-	100	77.132	Mesocricetus_auratus
ENSCAFG00020009815	ALYREF	100	97.276	ENSMICG00000017403	ALYREF	97	97.276	Microcebus_murinus
ENSCAFG00020009815	ALYREF	100	83.712	ENSMOCG00000016792	-	100	82.197	Microtus_ochrogaster
ENSCAFG00020009815	ALYREF	99	96.498	ENSMODG00000003030	ALYREF	84	96.498	Monodelphis_domestica
ENSCAFG00020009815	ALYREF	100	70.290	ENSMALG00000019408	ALYREF	100	72.000	Monopterus_albus
ENSCAFG00020009815	ALYREF	100	78.509	MGP_CAROLIEiJ_G0014874	Alyref2	100	73.684	Mus_caroli
ENSCAFG00020009815	ALYREF	100	96.498	MGP_CAROLIEiJ_G0017529	Alyref	100	96.498	Mus_caroli
ENSCAFG00020009815	ALYREF	91	66.239	ENSMUSG00000112931	Gm4303	58	71.264	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000095022	Gm20765	100	53.873	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000091779	Gm21293	100	53.873	Mus_musculus
ENSCAFG00020009815	ALYREF	91	66.239	ENSMUSG00000096744	Gm4307	58	71.264	Mus_musculus
ENSCAFG00020009815	ALYREF	100	96.498	ENSMUSG00000025134	Alyref	100	96.498	Mus_musculus
ENSCAFG00020009815	ALYREF	91	65.106	ENSMUSG00000096640	Gm4312	77	59.031	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000097550	Gm21304	100	53.873	Mus_musculus
ENSCAFG00020009815	ALYREF	100	61.592	ENSMUSG00000090854	Gm4340	100	52.431	Mus_musculus
ENSCAFG00020009815	ALYREF	91	66.383	ENSMUSG00000091101	Gm4302	57	71.264	Mus_musculus
ENSCAFG00020009815	ALYREF	91	65.106	ENSMUSG00000094314	Gm4301	77	59.031	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000097878	Gm8764	98	66.892	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000097427	Gm6763	98	66.892	Mus_musculus
ENSCAFG00020009815	ALYREF	91	66.239	ENSMUSG00000112856	Gm4305	58	71.264	Mus_musculus
ENSCAFG00020009815	ALYREF	100	62.456	ENSMUSG00000094144	Gm21312	100	53.873	Mus_musculus
ENSCAFG00020009815	ALYREF	100	61.278	ENSMUSG00000086727	4931428L18Rik	100	57.955	Mus_musculus
ENSCAFG00020009815	ALYREF	100	78.027	ENSMUSG00000060244	Alyref2	100	74.888	Mus_musculus
ENSCAFG00020009815	ALYREF	100	60.902	ENSMUSG00000117091	AC153137.1	100	57.197	Mus_musculus
ENSCAFG00020009815	ALYREF	74	96.825	MGP_PahariEiJ_G0018656	-	99	96.825	Mus_pahari
ENSCAFG00020009815	ALYREF	100	96.498	MGP_PahariEiJ_G0018655	-	100	96.498	Mus_pahari
ENSCAFG00020009815	ALYREF	85	72.222	MGP_PahariEiJ_G0027254	-	78	70.286	Mus_pahari
ENSCAFG00020009815	ALYREF	85	72.222	MGP_PahariEiJ_G0027255	-	76	70.286	Mus_pahari
ENSCAFG00020009815	ALYREF	100	96.498	MGP_SPRETEiJ_G0018373	Alyref	100	96.498	Mus_spretus
ENSCAFG00020009815	ALYREF	100	78.027	MGP_SPRETEiJ_G0015679	Alyref2	100	74.888	Mus_spretus
ENSCAFG00020009815	ALYREF	58	77.119	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSCAFG00020009815	ALYREF	98	62.745	ENSMLUG00000030407	-	77	61.569	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	100	52.632	ENSMLUG00000023213	-	100	47.328	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	65.116	ENSMLUG00000002626	-	98	66.279	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	82	85.047	ENSMLUG00000009555	-	66	94.382	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	71.429	ENSMLUG00000027516	-	78	68.254	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	61.905	ENSMLUG00000024447	-	76	61.905	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	63.636	ENSMLUG00000024976	-	79	60.474	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	64.314	ENSMLUG00000025677	-	77	62.745	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	58.984	ENSMLUG00000022869	-	81	55.042	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	59.231	ENSMLUG00000024471	-	82	54.023	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	84	59.817	ENSMLUG00000028343	-	85	65.730	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	64.542	ENSMLUG00000026271	-	79	62.948	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	63.492	ENSMLUG00000027352	-	77	63.095	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	98	56.977	ENSMLUG00000015043	-	98	54.054	Myotis_lucifugus
ENSCAFG00020009815	ALYREF	100	97.665	ENSNLEG00000010313	ALYREF	97	97.665	Nomascus_leucogenys
ENSCAFG00020009815	ALYREF	82	75.238	ENSMEUG00000002210	ALYREF	92	75.238	Notamacropus_eugenii
ENSCAFG00020009815	ALYREF	52	91.791	ENSOPRG00000005551	-	52	89.552	Ochotona_princeps
ENSCAFG00020009815	ALYREF	100	96.538	ENSODEG00000008359	ALYREF	100	96.538	Octodon_degus
ENSCAFG00020009815	ALYREF	100	69.455	ENSORLG00000012331	ALYREF	100	69.818	Oryzias_latipes
ENSCAFG00020009815	ALYREF	77	90.909	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSCAFG00020009815	ALYREF	69	100.000	ENSOARG00000017932	ALYREF	67	100.000	Ovis_aries
ENSCAFG00020009815	ALYREF	100	98.833	ENSPPRG00000010829	ALYREF	98	98.833	Panthera_pardus
ENSCAFG00020009815	ALYREF	59	98.319	ENSPTIG00000006399	ALYREF	81	99.310	Panthera_tigris_altaica
ENSCAFG00020009815	ALYREF	100	97.665	ENSPTRG00000009774	ALYREF	97	97.665	Pan_troglodytes
ENSCAFG00020009815	ALYREF	100	98.054	ENSPANG00000019265	ALYREF	97	98.054	Papio_anubis
ENSCAFG00020009815	ALYREF	51	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSCAFG00020009815	ALYREF	100	97.276	ENSPPYG00000008749	ALYREF	97	97.276	Pongo_abelii
ENSCAFG00020009815	ALYREF	100	97.276	ENSPCOG00000020874	ALYREF	97	97.276	Propithecus_coquereli
ENSCAFG00020009815	ALYREF	100	80.934	ENSPVAG00000017866	ALYREF	100	80.934	Pteropus_vampyrus
ENSCAFG00020009815	ALYREF	67	97.093	ENSRNOG00000036687	Alyref	91	97.093	Rattus_norvegicus
ENSCAFG00020009815	ALYREF	70	94.475	ENSRBIG00000039651	ALYREF	74	94.475	Rhinopithecus_bieti
ENSCAFG00020009815	ALYREF	90	90.086	ENSRROG00000045364	ALYREF	83	95.735	Rhinopithecus_roxellana
ENSCAFG00020009815	ALYREF	75	93.782	ENSSHAG00000010459	ALYREF	95	95.652	Sarcophilus_harrisii
ENSCAFG00020009815	ALYREF	100	52.158	ENSSDUG00000003992	-	100	53.381	Seriola_dumerili
ENSCAFG00020009815	ALYREF	100	53.091	ENSSLDG00000005386	-	100	53.957	Seriola_lalandi_dorsalis
ENSCAFG00020009815	ALYREF	100	83.588	ENSSPUG00000004600	ALYREF	100	81.679	Sphenodon_punctatus
ENSCAFG00020009815	ALYREF	100	68.817	ENSSPAG00000011178	ALYREF	97	69.892	Stegastes_partitus
ENSCAFG00020009815	ALYREF	100	99.222	ENSSSCG00000032655	ALYREF	100	99.222	Sus_scrofa
ENSCAFG00020009815	ALYREF	51	93.182	ENSTGUG00000003513	ALYREF	100	91.111	Taeniopygia_guttata
ENSCAFG00020009815	ALYREF	100	69.853	ENSTRUG00000008828	ALYREF	100	68.266	Takifugu_rubripes
ENSCAFG00020009815	ALYREF	69	98.315	ENSTBEG00000005834	ALYREF	100	98.315	Tupaia_belangeri
ENSCAFG00020009815	ALYREF	100	97.276	ENSTTRG00000012275	ALYREF	100	97.276	Tursiops_truncatus
ENSCAFG00020009815	ALYREF	69	85.311	ENSUAMG00000016931	ALYREF	66	83.051	Ursus_americanus
ENSCAFG00020009815	ALYREF	69	85.311	ENSUMAG00000016384	ALYREF	65	83.051	Ursus_maritimus
ENSCAFG00020009815	ALYREF	100	75.194	ENSXETG00000005391	alyref	100	73.359	Xenopus_tropicalis