EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAFG00020009847 (Gene tree)
Gene ID
112677564
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Minus strand
Length
75598 bases
Position
chrQKWQ01001968.1:15139610-15215207
Accession
112677564
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020012233tRNA_anti-codonPF01336.251.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020014113RPA1-2012242-ENSCAFP00020012233616 (aa)XP_025331929UPI00004C1400
Gene Model
Click here to download ENSCAFG00020009847's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009847's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020009847RPA19963.175ENSAPOG00000011658rpa19962.520Acanthochromis_polyacanthus
ENSCAFG00020009847RPA19758.958ENSAPOG00000019409RPA19258.750Acanthochromis_polyacanthus
ENSCAFG00020009847RPA19995.402ENSAMEG00000007706RPA19895.402Ailuropoda_melanoleuca
ENSCAFG00020009847RPA19558.305ENSACIG00000012881RPA19958.136Amphilophus_citrinellus
ENSCAFG00020009847RPA19558.404ENSACIG00000007277rpa19958.234Amphilophus_citrinellus
ENSCAFG00020009847RPA19954.000ENSAOCG00000009003RPA19954.405Amphiprion_ocellaris
ENSCAFG00020009847RPA19963.830ENSAOCG00000023376rpa19963.502Amphiprion_ocellaris
ENSCAFG00020009847RPA19953.172ENSAPEG00000019132RPA19953.474Amphiprion_percula
ENSCAFG00020009847RPA19963.993ENSAPEG00000008634rpa19963.683Amphiprion_percula
ENSCAFG00020009847RPA19954.824ENSATEG00000006443RPA19954.058Anabas_testudineus
ENSCAFG00020009847RPA19464.433ENSATEG00000022024rpa19964.089Anabas_testudineus
ENSCAFG00020009847RPA19865.583ENSAPLG00000012442RPA19472.772Anas_platyrhynchos
ENSCAFG00020009847RPA19963.166ENSACAG00000014490RPA19963.871Anolis_carolinensis
ENSCAFG00020009847RPA19888.391ENSANAG00000023456RPA110088.391Aotus_nancymaae
ENSCAFG00020009847RPA19957.837ENSACLG00000005223RPA19957.524Astatotilapia_calliptera
ENSCAFG00020009847RPA19363.230ENSACLG00000006640rpa19963.058Astatotilapia_calliptera
ENSCAFG00020009847RPA19961.889ENSAMXG00000008418rpa19961.564Astyanax_mexicanus
ENSCAFG00020009847RPA110092.208ENSBTAG00000009711RPA110092.208Bos_taurus
ENSCAFG00020009847RPA17631.368WBGene00017546rpa-17131.368Caenorhabditis_elegans
ENSCAFG00020009847RPA110088.636ENSCJAG00000001848RPA110088.636Callithrix_jacchus
ENSCAFG00020009847RPA1100100.000ENSCAFG00000019249RPA1100100.000Canis_familiaris
ENSCAFG00020009847RPA110092.208ENSCHIG00000026308RPA110092.208Capra_hircus
ENSCAFG00020009847RPA110090.762ENSTSYG00000003482-10090.762Carlito_syrichta
ENSCAFG00020009847RPA110086.688ENSCPOG00000000035RPA110086.688Cavia_porcellus
ENSCAFG00020009847RPA110077.383ENSCCAG00000010981RPA110077.383Cebus_capucinus
ENSCAFG00020009847RPA110083.604ENSCLAG00000015045-10083.604Chinchilla_lanigera
ENSCAFG00020009847RPA19988.274ENSCLAG00000005185-9988.274Chinchilla_lanigera
ENSCAFG00020009847RPA110077.221ENSCSAG00000013833RPA110077.903Chlorocebus_sabaeus
ENSCAFG00020009847RPA19587.755ENSCHOG00000013540-10087.755Choloepus_hoffmanni
ENSCAFG00020009847RPA17192.483ENSCHOG00000009454-10092.483Choloepus_hoffmanni
ENSCAFG00020009847RPA19977.886ENSCPBG00000020377RPA19978.421Chrysemys_picta_bellii
ENSCAFG00020009847RPA19940.879ENSCING00000023482-9840.686Ciona_intestinalis
ENSCAFG00020009847RPA19885.289ENSCANG00000030911RPA110085.289Colobus_angolensis_palliatus
ENSCAFG00020009847RPA19988.997ENSCGRG00001008197Rpa19988.997Cricetulus_griseus_chok1gshd
ENSCAFG00020009847RPA18188.166ENSCGRG00000000582Rpa19988.166Cricetulus_griseus_crigri
ENSCAFG00020009847RPA19951.675ENSCSEG00000012726RPA19852.650Cynoglossus_semilaevis
ENSCAFG00020009847RPA19961.238ENSCSEG00000013066rpa19960.912Cynoglossus_semilaevis
ENSCAFG00020009847RPA19554.419ENSCVAG00000013446-9654.264Cyprinodon_variegatus
ENSCAFG00020009847RPA19963.132ENSCVAG00000019431rpa19963.636Cyprinodon_variegatus
ENSCAFG00020009847RPA19963.029ENSDARG00000003938rpa19962.378Danio_rerio
ENSCAFG00020009847RPA19990.774ENSDNOG00000017218RPA19990.774Dasypus_novemcinctus
ENSCAFG00020009847RPA110088.961ENSDORG00000006199Rpa110088.961Dipodomys_ordii
ENSCAFG00020009847RPA19942.512FBgn0010173RpA-709842.673Drosophila_melanogaster
ENSCAFG00020009847RPA18386.598ENSETEG00000017608RPA18286.598Echinops_telfairi
ENSCAFG00020009847RPA19892.359ENSEASG00005009372RPA110090.145Equus_asinus_asinus
ENSCAFG00020009847RPA110092.695ENSECAG00000023886RPA110092.695Equus_caballus
ENSCAFG00020009847RPA16892.143ENSEEUG00000002186-6892.143Erinaceus_europaeus
ENSCAFG00020009847RPA19960.940ENSELUG00000021071rpa19960.454Esox_lucius
ENSCAFG00020009847RPA18856.354ENSELUG00000006136RPA19955.801Esox_lucius
ENSCAFG00020009847RPA110093.193ENSFCAG00000006306RPA19993.193Felis_catus
ENSCAFG00020009847RPA110074.637ENSFALG00000006575RPA19974.637Ficedula_albicollis
ENSCAFG00020009847RPA19989.088ENSFDAG00000007720RPA19989.088Fukomys_damarensis
ENSCAFG00020009847RPA19961.741ENSFHEG00000003580rpa19961.576Fundulus_heteroclitus
ENSCAFG00020009847RPA19959.411ENSGMOG00000010382rpa19959.247Gadus_morhua
ENSCAFG00020009847RPA110074.230ENSGALG00000003072RPA19974.230Gallus_gallus
ENSCAFG00020009847RPA19954.614ENSGAFG00000020953RPA19954.394Gambusia_affinis
ENSCAFG00020009847RPA19962.603ENSGAFG00000012916rpa19962.273Gambusia_affinis
ENSCAFG00020009847RPA19961.551ENSGACG00000010856rpa19961.066Gasterosteus_aculeatus
ENSCAFG00020009847RPA19977.886ENSGAGG00000013611RPA19977.886Gopherus_agassizii
ENSCAFG00020009847RPA110086.201ENSGGOG00000014186RPA110086.201Gorilla_gorilla
ENSCAFG00020009847RPA19963.339ENSHBUG00000017773rpa19963.011Haplochromis_burtoni
ENSCAFG00020009847RPA19654.409ENSHBUG00000009348RPA19954.077Haplochromis_burtoni
ENSCAFG00020009847RPA19989.088ENSHGLG00000008846RPA110089.088Heterocephalus_glaber_female
ENSCAFG00020009847RPA110075.974ENSHGLG00100002005-10075.649Heterocephalus_glaber_male
ENSCAFG00020009847RPA110083.766ENSHGLG00100000799-10083.766Heterocephalus_glaber_male
ENSCAFG00020009847RPA19989.088ENSHGLG00100017755-10089.088Heterocephalus_glaber_male
ENSCAFG00020009847RPA19944.318ENSHCOG00000000351RPA19844.318Hippocampus_comes
ENSCAFG00020009847RPA19960.720ENSHCOG00000001401rpa19960.884Hippocampus_comes
ENSCAFG00020009847RPA19961.789ENSIPUG00000004400rpa19961.463Ictalurus_punctatus
ENSCAFG00020009847RPA19883.388ENSSTOG00000022475RPA19883.388Ictidomys_tridecemlineatus
ENSCAFG00020009847RPA19589.626ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSCAFG00020009847RPA19961.538ENSKMAG00000005605rpa19961.866Kryptolebias_marmoratus
ENSCAFG00020009847RPA19954.443ENSKMAG00000000234RPA19954.281Kryptolebias_marmoratus
ENSCAFG00020009847RPA19762.358ENSLBEG00000002281RPA18561.905Labrus_bergylta
ENSCAFG00020009847RPA19963.562ENSLBEG00000021604rpa19963.562Labrus_bergylta
ENSCAFG00020009847RPA18166.533ENSLACG00000007210RPA19966.333Latimeria_chalumnae
ENSCAFG00020009847RPA19967.101ENSLOCG00000006397rpa19967.101Lepisosteus_oculatus
ENSCAFG00020009847RPA19987.903ENSLAFG00000015354RPA19987.903Loxodonta_africana
ENSCAFG00020009847RPA18288.735ENSMFAG00000036138-10089.546Macaca_fascicularis
ENSCAFG00020009847RPA110082.010ENSMMUG00000002442-10082.010Macaca_mulatta
ENSCAFG00020009847RPA19888.760ENSMMUG00000011604-10089.439Macaca_mulatta
ENSCAFG00020009847RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSCAFG00020009847RPA110085.552ENSMNEG00000031632-10086.224Macaca_nemestrina
ENSCAFG00020009847RPA19882.673ENSMLEG00000038768-10083.361Mandrillus_leucophaeus
ENSCAFG00020009847RPA19963.607ENSMAMG00000017993rpa19962.951Mastacembelus_armatus
ENSCAFG00020009847RPA19952.148ENSMAMG00000020097RPA19952.290Mastacembelus_armatus
ENSCAFG00020009847RPA19963.339ENSMZEG00005007551rpa19963.011Maylandia_zebra
ENSCAFG00020009847RPA19957.837ENSMZEG00005024731RPA19957.524Maylandia_zebra
ENSCAFG00020009847RPA19973.906ENSMGAG00000005315RPA19973.906Meleagris_gallopavo
ENSCAFG00020009847RPA19789.500ENSMAUG00000010474Rpa19989.500Mesocricetus_auratus
ENSCAFG00020009847RPA110091.558ENSMICG00000012867RPA110091.558Microcebus_murinus
ENSCAFG00020009847RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSCAFG00020009847RPA19756.260ENSMMOG00000010868RPA19759.341Mola_mola
ENSCAFG00020009847RPA19962.193ENSMMOG00000014292rpa19962.669Mola_mola
ENSCAFG00020009847RPA19984.528ENSMODG00000010549RPA19984.528Monodelphis_domestica
ENSCAFG00020009847RPA19963.980ENSMALG00000011453rpa19963.487Monopterus_albus
ENSCAFG00020009847RPA19859.871ENSMALG00000001208RPA18459.657Monopterus_albus
ENSCAFG00020009847RPA19987.662MGP_CAROLIEiJ_G0016734Rpa19987.662Mus_caroli
ENSCAFG00020009847RPA19986.013ENSMUSG00000000751Rpa19986.013Mus_musculus
ENSCAFG00020009847RPA19988.691MGP_PahariEiJ_G0017871Rpa19988.691Mus_pahari
ENSCAFG00020009847RPA19985.875MGP_SPRETEiJ_G0017577Rpa19985.875Mus_spretus
ENSCAFG00020009847RPA110095.455ENSMPUG00000013119RPA110095.455Mustela_putorius_furo
ENSCAFG00020009847RPA110088.084ENSMLUG00000006113RPA110088.084Myotis_lucifugus
ENSCAFG00020009847RPA19985.413ENSNGAG00000004522Rpa19785.413Nannospalax_galili
ENSCAFG00020009847RPA19656.661ENSNBRG00000009672RPA19556.324Neolamprologus_brichardi
ENSCAFG00020009847RPA19463.032ENSNBRG00000020595rpa19962.862Neolamprologus_brichardi
ENSCAFG00020009847RPA110088.149ENSNLEG00000017149RPA110088.655Nomascus_leucogenys
ENSCAFG00020009847RPA19874.086ENSMEUG00000006714RPA19974.086Notamacropus_eugenii
ENSCAFG00020009847RPA110082.720ENSODEG00000009038RPA110082.720Octodon_degus
ENSCAFG00020009847RPA19963.592ENSONIG00000013135rpa19963.269Oreochromis_niloticus
ENSCAFG00020009847RPA19883.555ENSOANG00000010880RPA19983.721Ornithorhynchus_anatinus
ENSCAFG00020009847RPA110086.533ENSOCUG00000001504RPA110086.533Oryctolagus_cuniculus
ENSCAFG00020009847RPA19963.339ENSORLG00000004856rpa19962.684Oryzias_latipes
ENSCAFG00020009847RPA19953.905ENSORLG00000003368RPA19953.752Oryzias_latipes
ENSCAFG00020009847RPA19952.481ENSORLG00020015284RPA19952.331Oryzias_latipes_hni
ENSCAFG00020009847RPA19963.502ENSORLG00020008980rpa19962.848Oryzias_latipes_hni
ENSCAFG00020009847RPA19954.290ENSORLG00015020383RPA19954.134Oryzias_latipes_hsok
ENSCAFG00020009847RPA17060.739ENSORLG00015005867-9960.508Oryzias_latipes_hsok
ENSCAFG00020009847RPA19963.502ENSORLG00015013982rpa19962.848Oryzias_latipes_hsok
ENSCAFG00020009847RPA19961.564ENSOMEG00000004704rpa19961.075Oryzias_melastigma
ENSCAFG00020009847RPA19953.470ENSOMEG00000011040RPA19956.336Oryzias_melastigma
ENSCAFG00020009847RPA110089.448ENSOGAG00000005581-10089.448Otolemur_garnettii
ENSCAFG00020009847RPA19485.263ENSOGAG00000029379-10085.263Otolemur_garnettii
ENSCAFG00020009847RPA110092.208ENSOARG00000014479RPA110092.208Ovis_aries
ENSCAFG00020009847RPA110088.149ENSPPAG00000039680RPA110088.655Pan_paniscus
ENSCAFG00020009847RPA110092.869ENSPPRG00000011807RPA19992.869Panthera_pardus
ENSCAFG00020009847RPA110092.707ENSPTIG00000007898RPA19992.707Panthera_tigris_altaica
ENSCAFG00020009847RPA110088.149ENSPTRG00000008539RPA110088.655Pan_troglodytes
ENSCAFG00020009847RPA110088.636ENSPANG00000024592RPA110089.303Papio_anubis
ENSCAFG00020009847RPA19462.436ENSPKIG00000008053rpa19462.842Paramormyrops_kingsleyae
ENSCAFG00020009847RPA19777.500ENSPSIG00000015617RPA19977.500Pelodiscus_sinensis
ENSCAFG00020009847RPA19862.521ENSPMGG00000011589rpa19962.023Periophthalmus_magnuspinnatus
ENSCAFG00020009847RPA19954.207ENSPMGG00000000543RPA19956.063Periophthalmus_magnuspinnatus
ENSCAFG00020009847RPA19989.723ENSPEMG00000021061Rpa19989.723Peromyscus_maniculatus_bairdii
ENSCAFG00020009847RPA19982.602ENSPCIG00000019049RPA19983.415Phascolarctos_cinereus
ENSCAFG00020009847RPA19962.787ENSPFOG00000003987rpa19962.459Poecilia_formosa
ENSCAFG00020009847RPA19962.459ENSPLAG00000004984rpa19962.131Poecilia_latipinna
ENSCAFG00020009847RPA19453.612ENSPLAG00000008844-9753.451Poecilia_latipinna
ENSCAFG00020009847RPA19454.240ENSPMEG00000003627-9754.414Poecilia_mexicana
ENSCAFG00020009847RPA19962.951ENSPMEG00000020602rpa19963.796Poecilia_mexicana
ENSCAFG00020009847RPA19952.585ENSPREG00000010119RPA110051.858Poecilia_reticulata
ENSCAFG00020009847RPA19454.966ENSPREG00000010174rpa19654.966Poecilia_reticulata
ENSCAFG00020009847RPA110092.045ENSPCOG00000001799RPA110092.045Propithecus_coquereli
ENSCAFG00020009847RPA110091.558ENSPVAG00000002149RPA110091.558Pteropus_vampyrus
ENSCAFG00020009847RPA19963.502ENSPNYG00000016316rpa19963.175Pundamilia_nyererei
ENSCAFG00020009847RPA19957.524ENSPNYG00000024165RPA19957.210Pundamilia_nyererei
ENSCAFG00020009847RPA19854.817ENSPNAG00000008599rpa19555.766Pygocentrus_nattereri
ENSCAFG00020009847RPA19988.581ENSRNOG00000003123Rpa19988.581Rattus_norvegicus
ENSCAFG00020009847RPA110088.655ENSRBIG00000036587RPA110088.655Rhinopithecus_bieti
ENSCAFG00020009847RPA110083.468ENSRROG00000043278RPA110083.468Rhinopithecus_roxellana
ENSCAFG00020009847RPA19731.915YAR007CRFA19731.856Saccharomyces_cerevisiae
ENSCAFG00020009847RPA19884.603ENSSBOG00000030233RPA19984.603Saimiri_boliviensis_boliviensis
ENSCAFG00020009847RPA19984.590ENSSHAG00000007969RPA19884.918Sarcophilus_harrisii
ENSCAFG00020009847RPA19964.379ENSSFOG00015005362rpa19264.379Scleropages_formosus
ENSCAFG00020009847RPA19953.263ENSSMAG00000019746RPA19952.656Scophthalmus_maximus
ENSCAFG00020009847RPA19965.139ENSSDUG00000011949rpa19964.812Seriola_dumerili
ENSCAFG00020009847RPA19952.423ENSSDUG00000016358RPA19952.423Seriola_dumerili
ENSCAFG00020009847RPA18964.501ENSSLDG00000020784RPA18664.009Seriola_lalandi_dorsalis
ENSCAFG00020009847RPA19965.303ENSSLDG00000011806rpa19964.975Seriola_lalandi_dorsalis
ENSCAFG00020009847RPA18885.294ENSSARG00000007506RPA110070.083Sorex_araneus
ENSCAFG00020009847RPA19773.782ENSSPUG00000007223RPA19973.782Sphenodon_punctatus
ENSCAFG00020009847RPA19963.725ENSSPAG00000009903rpa19963.399Stegastes_partitus
ENSCAFG00020009847RPA19657.966ENSSPAG00000011165RPA19757.143Stegastes_partitus
ENSCAFG00020009847RPA19890.547ENSSSCG00000017822RPA110090.547Sus_scrofa
ENSCAFG00020009847RPA110074.230ENSTGUG00000005775RPA19974.230Taeniopygia_guttata
ENSCAFG00020009847RPA19958.586ENSTRUG00000000405RPA18758.384Takifugu_rubripes
ENSCAFG00020009847RPA19964.803ENSTRUG00000003616rpa19964.145Takifugu_rubripes
ENSCAFG00020009847RPA19965.309ENSTNIG00000016199rpa19965.309Tetraodon_nigroviridis
ENSCAFG00020009847RPA18797.674ENSTBEG00000002709RPA18997.674Tupaia_belangeri
ENSCAFG00020009847RPA19991.531ENSTTRG00000001169RPA19991.531Tursiops_truncatus
ENSCAFG00020009847RPA18896.154ENSUAMG00000015676RPA19995.568Ursus_americanus
ENSCAFG00020009847RPA110095.779ENSUMAG00000009328RPA110095.779Ursus_maritimus
ENSCAFG00020009847RPA110089.448ENSVPAG00000009443RPA110089.448Vicugna_pacos
ENSCAFG00020009847RPA110099.026ENSVVUG00000021715RPA110099.026Vulpes_vulpes
ENSCAFG00020009847RPA19973.065ENSXETG00000013538rpa19974.468Xenopus_tropicalis
ENSCAFG00020009847RPA19556.410ENSXCOG00000009899-9956.239Xiphophorus_couchianus
ENSCAFG00020009847RPA19360.733ENSXCOG00000010068rpa19560.558Xiphophorus_couchianus
ENSCAFG00020009847RPA19163.492ENSXMAG00000010333RPA18963.265Xiphophorus_maculatus
ENSCAFG00020009847RPA19961.148ENSXMAG00000004102rpa19962.610Xiphophorus_maculatus

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