EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020009904 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chrQKWQ01002178.1:6187890-6188045
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012306	Ribosomal_L39	PF00832.20	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020014200	-	156	-	ENSCAFP00020012306	51 (aa)	-	UPI000225603D

Gene Model

Click here to download ENSCAFG00020009904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020009904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020009904	-	100	90.196	ENSCAFG00020027515	-	100	90.196
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020026664	-	100	96.078
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020023650	-	100	96.078
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020023883	-	100	94.118
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020026703	-	100	96.078
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020026417	-	100	96.078
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020006843	-	100	94.118
ENSCAFG00020009904	-	98	87.273	ENSCAFG00020004092	-	89	87.273
ENSCAFG00020009904	-	100	92.157	ENSCAFG00020005870	-	100	92.157
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020013245	-	100	94.118
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020014857	-	100	96.078
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020010357	-	100	94.118
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020003011	-	100	96.078
ENSCAFG00020009904	-	98	94.000	ENSCAFG00020025145	-	100	94.000
ENSCAFG00020009904	-	100	86.792	ENSCAFG00020019046	-	100	86.792
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020000437	-	100	96.078
ENSCAFG00020009904	-	100	92.157	ENSCAFG00020019302	-	100	92.157
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020023515	-	100	96.078
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020022170	-	100	96.078
ENSCAFG00020009904	-	100	90.196	ENSCAFG00020017348	-	75	90.196
ENSCAFG00020009904	-	100	96.078	ENSCAFG00020027407	-	100	96.078
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020012355	-	100	94.118
ENSCAFG00020009904	-	100	92.157	ENSCAFG00020018445	-	68	92.157
ENSCAFG00020009904	-	100	94.118	ENSCAFG00020002578	-	100	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020009904	-	100	98.039	ENSAMEG00000019848	-	100	98.039	Ailuropoda_melanoleuca
ENSCAFG00020009904	-	100	98.039	ENSANAG00000031418	-	100	98.039	Aotus_nancymaae
ENSCAFG00020009904	-	100	90.196	ENSANAG00000016436	-	100	90.196	Aotus_nancymaae
ENSCAFG00020009904	-	100	96.078	ENSANAG00000016046	-	100	96.078	Aotus_nancymaae
ENSCAFG00020009904	-	90	89.130	ENSTSYG00000026787	-	82	89.130	Carlito_syrichta
ENSCAFG00020009904	-	100	94.118	ENSTSYG00000026785	-	100	94.118	Carlito_syrichta
ENSCAFG00020009904	-	100	98.039	ENSCAPG00000007210	-	100	98.039	Cavia_aperea
ENSCAFG00020009904	-	100	98.039	ENSCPOG00000036636	-	100	98.039	Cavia_porcellus
ENSCAFG00020009904	-	100	96.078	ENSCLAG00000017874	-	100	96.078	Chinchilla_lanigera
ENSCAFG00020009904	-	100	92.157	ENSCLAG00000017707	-	100	92.157	Chinchilla_lanigera
ENSCAFG00020009904	-	100	84.314	ENSCGRG00001008057	-	100	84.314	Cricetulus_griseus_chok1gshd
ENSCAFG00020009904	-	100	94.118	ENSCGRG00001012052	-	100	94.118	Cricetulus_griseus_chok1gshd
ENSCAFG00020009904	-	100	92.157	ENSCGRG00001003230	Rpl39l	100	92.157	Cricetulus_griseus_chok1gshd
ENSCAFG00020009904	-	100	94.118	ENSCGRG00000019654	-	100	94.118	Cricetulus_griseus_crigri
ENSCAFG00020009904	-	100	92.157	ENSCGRG00000018615	Rpl39l	100	92.157	Cricetulus_griseus_crigri
ENSCAFG00020009904	-	100	96.078	ENSDORG00000028485	-	100	96.078	Dipodomys_ordii
ENSCAFG00020009904	-	100	94.118	ENSDORG00000027732	-	100	94.118	Dipodomys_ordii
ENSCAFG00020009904	-	100	73.077	ENSFCAG00000038709	-	91	73.077	Felis_catus
ENSCAFG00020009904	-	100	82.353	ENSFCAG00000044333	RPL39L	100	82.353	Felis_catus
ENSCAFG00020009904	-	100	94.118	ENSFDAG00000021400	-	100	94.118	Fukomys_damarensis
ENSCAFG00020009904	-	100	90.196	ENSGGOG00000036596	-	100	90.196	Gorilla_gorilla
ENSCAFG00020009904	-	92	91.489	ENSGGOG00000040312	-	65	91.489	Gorilla_gorilla
ENSCAFG00020009904	-	100	94.118	ENSHGLG00000020604	-	100	94.118	Heterocephalus_glaber_female
ENSCAFG00020009904	-	100	94.118	ENSHGLG00100011216	-	100	94.118	Heterocephalus_glaber_male
ENSCAFG00020009904	-	100	96.078	ENSSTOG00000028051	-	100	96.078	Ictidomys_tridecemlineatus
ENSCAFG00020009904	-	100	98.039	ENSSTOG00000030492	-	100	98.039	Ictidomys_tridecemlineatus
ENSCAFG00020009904	-	100	90.196	ENSJJAG00000010041	-	100	90.196	Jaculus_jaculus
ENSCAFG00020009904	-	100	94.118	ENSLAFG00000028648	-	100	94.118	Loxodonta_africana
ENSCAFG00020009904	-	100	96.078	ENSMFAG00000020492	-	100	96.078	Macaca_fascicularis
ENSCAFG00020009904	-	100	96.078	ENSMMUG00000045452	-	100	96.078	Macaca_mulatta
ENSCAFG00020009904	-	100	92.157	ENSMMUG00000038479	-	100	92.157	Macaca_mulatta
ENSCAFG00020009904	-	100	98.039	ENSMMUG00000044527	-	100	98.039	Macaca_mulatta
ENSCAFG00020009904	-	100	96.078	ENSMNEG00000000126	-	100	96.078	Macaca_nemestrina
ENSCAFG00020009904	-	100	90.196	ENSMNEG00000001683	-	68	90.196	Macaca_nemestrina
ENSCAFG00020009904	-	100	92.157	ENSMLEG00000009433	-	100	92.157	Mandrillus_leucophaeus
ENSCAFG00020009904	-	100	96.078	ENSMLEG00000018088	-	100	96.078	Mandrillus_leucophaeus
ENSCAFG00020009904	-	100	98.039	ENSMLEG00000003517	-	100	98.039	Mandrillus_leucophaeus
ENSCAFG00020009904	-	98	96.000	ENSMLEG00000000739	-	100	96.000	Mandrillus_leucophaeus
ENSCAFG00020009904	-	100	92.157	ENSMAUG00000015776	Rpl39l	100	92.157	Mesocricetus_auratus
ENSCAFG00020009904	-	100	92.157	ENSMAUG00000002516	-	100	92.157	Mesocricetus_auratus
ENSCAFG00020009904	-	100	98.039	ENSMOCG00000002138	-	100	98.039	Microtus_ochrogaster
ENSCAFG00020009904	-	100	90.196	ENSMOCG00000001545	Rpl39l	100	90.196	Microtus_ochrogaster
ENSCAFG00020009904	-	100	94.118	MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	Mus_caroli
ENSCAFG00020009904	-	100	94.118	ENSMUSG00000039209	Rpl39l	100	94.118	Mus_musculus
ENSCAFG00020009904	-	100	94.118	MGP_SPRETEiJ_G0021332	Rpl39l	100	94.118	Mus_spretus
ENSCAFG00020009904	-	100	90.196	ENSMLUG00000025012	-	100	90.196	Myotis_lucifugus
ENSCAFG00020009904	-	100	90.196	ENSMLUG00000015029	-	100	90.196	Myotis_lucifugus
ENSCAFG00020009904	-	100	92.157	ENSNGAG00000012570	Rpl39l	100	92.157	Nannospalax_galili
ENSCAFG00020009904	-	90	89.130	ENSNGAG00000022494	-	96	89.130	Nannospalax_galili
ENSCAFG00020009904	-	100	88.235	ENSNGAG00000008665	-	100	88.235	Nannospalax_galili
ENSCAFG00020009904	-	100	96.078	ENSODEG00000020114	-	100	96.078	Octodon_degus
ENSCAFG00020009904	-	100	92.157	ENSOGAG00000024799	-	100	92.157	Otolemur_garnettii
ENSCAFG00020009904	-	100	88.235	ENSPPRG00000020779	-	100	88.235	Panthera_pardus
ENSCAFG00020009904	-	100	92.157	ENSPTIG00000006209	-	100	92.157	Panthera_tigris_altaica
ENSCAFG00020009904	-	98	96.000	ENSPANG00000030226	-	100	96.000	Papio_anubis
ENSCAFG00020009904	-	100	94.118	ENSRNOG00000032300	Rpl39l	100	94.118	Rattus_norvegicus
ENSCAFG00020009904	-	100	96.078	ENSRBIG00000010842	-	100	96.078	Rhinopithecus_bieti
ENSCAFG00020009904	-	100	96.078	ENSRROG00000023025	-	100	96.078	Rhinopithecus_roxellana
ENSCAFG00020009904	-	100	96.078	ENSRROG00000037724	-	100	96.078	Rhinopithecus_roxellana
ENSCAFG00020009904	-	100	86.275	ENSSSCG00000033224	-	100	86.275	Sus_scrofa
ENSCAFG00020009904	-	100	92.157	ENSSSCG00000038385	-	69	92.157	Sus_scrofa
ENSCAFG00020009904	-	100	98.039	ENSUAMG00000020990	-	100	98.039	Ursus_americanus
ENSCAFG00020009904	-	90	91.304	ENSUAMG00000000067	-	98	91.304	Ursus_americanus
ENSCAFG00020009904	-	100	98.039	ENSUMAG00000015280	-	100	98.039	Ursus_maritimus
ENSCAFG00020009904	-	98	94.000	ENSVVUG00000022951	-	100	94.000	Vulpes_vulpes
ENSCAFG00020009904	-	100	98.039	ENSVVUG00000030147	-	100	98.039	Vulpes_vulpes
ENSCAFG00020009904	-	100	88.235	ENSVVUG00000014095	-	100	88.235	Vulpes_vulpes