EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020010029 (Gene tree)
Gene ID: 112658614
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 14345 bases
Position: chrQKWQ01002203.1:6770353-6784697
Accession: 112658614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012453	KH_1	PF00013.29	4.3e-10	1	1
ENSCAFP00020012453	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020014370	-	1941	-	ENSCAFP00020012453	646 (aa)	XP_025300614	UPI00004BBCCF

Gene Model

Click here to download ENSCAFG00020010029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020010029	-	60	39.747	ENSCAFG00020024295	DDX4	57	40.691
ENSCAFG00020010029	-	55	32.402	ENSCAFG00020007858	EIF4A1	94	32.402
ENSCAFG00020010029	-	59	74.278	ENSCAFG00020005312	-	82	73.890
ENSCAFG00020010029	-	99	92.236	ENSCAFG00020002717	-	99	92.236
ENSCAFG00020010029	-	68	43.792	ENSCAFG00020026563	DDX5	72	43.459
ENSCAFG00020010029	-	56	30.051	ENSCAFG00020019785	DDX28	74	30.025
ENSCAFG00020010029	-	59	35.264	ENSCAFG00020006612	DDX47	85	35.264
ENSCAFG00020010029	-	60	33.165	ENSCAFG00020012375	DDX49	60	33.165
ENSCAFG00020010029	-	55	33.708	ENSCAFG00020013150	DDX6	72	33.708
ENSCAFG00020010029	-	65	32.870	ENSCAFG00020003753	DDX52	75	31.947
ENSCAFG00020010029	-	58	40.051	ENSCAFG00020027227	DDX3X	59	40.051
ENSCAFG00020010029	-	55	32.591	ENSCAFG00020006146	EIF4A2	86	32.591
ENSCAFG00020010029	-	63	37.081	ENSCAFG00020012019	DDX41	65	37.081
ENSCAFG00020010029	-	59	41.687	ENSCAFG00020013383	DDX23	50	41.687
ENSCAFG00020010029	-	55	32.782	ENSCAFG00020008055	DDX20	84	30.903
ENSCAFG00020010029	-	68	32.506	ENSCAFG00020018385	DDX59	68	32.506
ENSCAFG00020010029	-	56	35.309	ENSCAFG00020014114	DDX18	56	35.309
ENSCAFG00020010029	-	56	36.772	ENSCAFG00020017143	DDX27	50	36.772
ENSCAFG00020010029	-	52	35.143	ENSCAFG00020025973	-	95	35.143
ENSCAFG00020010029	-	52	33.038	ENSCAFG00020008253	EIF4A3	81	33.038
ENSCAFG00020010029	-	53	31.025	ENSCAFG00020015254	DDX55	65	31.302
ENSCAFG00020010029	-	68	43.468	ENSCAFG00020002867	DDX17	87	43.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020010029	-	100	89.077	ENSAMEG00000007851	-	100	89.077	Ailuropoda_melanoleuca
ENSCAFG00020010029	-	100	77.125	ENSBTAG00000021814	-	99	77.125	Bos_taurus
ENSCAFG00020010029	-	100	76.971	ENSCHIG00000017351	-	99	76.971	Capra_hircus
ENSCAFG00020010029	-	78	76.693	ENSCAPG00000004247	-	100	76.693	Cavia_aperea
ENSCAFG00020010029	-	100	81.144	ENSCPOG00000003991	-	100	81.144	Cavia_porcellus
ENSCAFG00020010029	-	100	73.765	ENSCLAG00000010261	-	100	73.765	Chinchilla_lanigera
ENSCAFG00020010029	-	61	78.107	ENSCHOG00000003450	-	70	78.107	Choloepus_hoffmanni
ENSCAFG00020010029	-	100	81.115	ENSCGRG00001001145	Ddx43	100	81.115	Cricetulus_griseus_chok1gshd
ENSCAFG00020010029	-	87	84.192	ENSCGRG00000010217	Ddx43	100	84.192	Cricetulus_griseus_crigri
ENSCAFG00020010029	-	100	82.055	ENSDNOG00000017589	-	99	82.055	Dasypus_novemcinctus
ENSCAFG00020010029	-	100	81.453	ENSDORG00000030010	Ddx43	100	81.453	Dipodomys_ordii
ENSCAFG00020010029	-	80	87.278	ENSETEG00000001887	-	81	87.278	Echinops_telfairi
ENSCAFG00020010029	-	100	82.870	ENSEASG00005004346	-	89	82.870	Equus_asinus_asinus
ENSCAFG00020010029	-	100	82.870	ENSECAG00000017971	DDX43	98	82.870	Equus_caballus
ENSCAFG00020010029	-	100	85.781	ENSFCAG00000031631	-	99	85.781	Felis_catus
ENSCAFG00020010029	-	87	80.995	ENSHGLG00000001118	-	100	80.995	Heterocephalus_glaber_female
ENSCAFG00020010029	-	97	77.760	ENSHGLG00100011895	-	99	77.690	Heterocephalus_glaber_male
ENSCAFG00020010029	-	87	73.535	ENSSTOG00000032538	-	100	73.535	Ictidomys_tridecemlineatus
ENSCAFG00020010029	-	100	79.907	ENSJJAG00000014184	Ddx43	100	79.907	Jaculus_jaculus
ENSCAFG00020010029	-	93	83.140	ENSLAFG00000012755	-	100	83.140	Loxodonta_africana
ENSCAFG00020010029	-	100	80.341	ENSMAUG00000001441	Ddx43	100	80.341	Mesocricetus_auratus
ENSCAFG00020010029	-	100	80.123	ENSMOCG00000012956	Ddx43	100	80.123	Microtus_ochrogaster
ENSCAFG00020010029	-	100	80.341	MGP_CAROLIEiJ_G0032467	Ddx43	100	80.341	Mus_caroli
ENSCAFG00020010029	-	100	80.650	ENSMUSG00000070291	Ddx43	100	80.650	Mus_musculus
ENSCAFG00020010029	-	91	85.317	MGP_PahariEiJ_G0015333	Ddx43	100	85.317	Mus_pahari
ENSCAFG00020010029	-	100	80.650	MGP_SPRETEiJ_G0033607	Ddx43	100	80.650	Mus_spretus
ENSCAFG00020010029	-	100	89.954	ENSMPUG00000004342	-	99	89.954	Mustela_putorius_furo
ENSCAFG00020010029	-	100	83.871	ENSMLUG00000017604	-	100	83.871	Myotis_lucifugus
ENSCAFG00020010029	-	100	81.115	ENSNGAG00000015102	Ddx43	100	81.298	Nannospalax_galili
ENSCAFG00020010029	-	75	81.250	ENSOPRG00000013523	-	86	81.250	Ochotona_princeps
ENSCAFG00020010029	-	84	80.515	ENSODEG00000016207	-	99	80.515	Octodon_degus
ENSCAFG00020010029	-	98	64.252	ENSOCUG00000025811	-	98	64.252	Oryctolagus_cuniculus
ENSCAFG00020010029	-	100	76.935	ENSOCUG00000006338	-	100	76.935	Oryctolagus_cuniculus
ENSCAFG00020010029	-	100	76.352	ENSOARG00000010873	-	99	76.352	Ovis_aries
ENSCAFG00020010029	-	100	86.244	ENSPTIG00000017842	-	99	86.244	Panthera_tigris_altaica
ENSCAFG00020010029	-	87	84.547	ENSPEMG00000023986	Ddx43	100	84.547	Peromyscus_maniculatus_bairdii
ENSCAFG00020010029	-	99	80.186	ENSPCAG00000005962	-	99	80.341	Procavia_capensis
ENSCAFG00020010029	-	87	87.234	ENSPVAG00000012718	-	99	87.234	Pteropus_vampyrus
ENSCAFG00020010029	-	100	80.650	ENSRNOG00000050868	Ddx43	100	80.650	Rattus_norvegicus
ENSCAFG00020010029	-	84	83.912	ENSSARG00000013493	-	99	83.912	Sorex_araneus
ENSCAFG00020010029	-	100	78.516	ENSSSCG00000004287	-	99	78.671	Sus_scrofa
ENSCAFG00020010029	-	87	72.824	ENSTTRG00000001488	-	99	72.824	Tursiops_truncatus
ENSCAFG00020010029	-	83	86.397	ENSUAMG00000012894	-	83	86.397	Ursus_americanus
ENSCAFG00020010029	-	100	89.352	ENSUMAG00000012291	-	99	89.352	Ursus_maritimus
ENSCAFG00020010029	-	94	74.098	ENSVPAG00000004969	-	100	74.098	Vicugna_pacos
ENSCAFG00020010029	-	100	97.678	ENSVVUG00000013908	-	100	97.678	Vulpes_vulpes