EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020010152 (Gene tree)
Gene ID: 112671062
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 59543 bases
Position: chrQKWQ01001341.1:4830065-4889607
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020012805	zf-C2H2	PF00096.26	2.5e-33	1	5
ENSCAFP00020012805	zf-C2H2	PF00096.26	2.5e-33	2	5
ENSCAFP00020012805	zf-C2H2	PF00096.26	2.5e-33	3	5
ENSCAFP00020012805	zf-C2H2	PF00096.26	2.5e-33	4	5
ENSCAFP00020012805	zf-C2H2	PF00096.26	2.5e-33	5	5
ENSCAFP00020012801	zf-C2H2	PF00096.26	2.7e-33	1	5
ENSCAFP00020012801	zf-C2H2	PF00096.26	2.7e-33	2	5
ENSCAFP00020012801	zf-C2H2	PF00096.26	2.7e-33	3	5
ENSCAFP00020012801	zf-C2H2	PF00096.26	2.7e-33	4	5
ENSCAFP00020012801	zf-C2H2	PF00096.26	2.7e-33	5	5
ENSCAFP00020012813	zf-C2H2	PF00096.26	1.6e-27	1	4
ENSCAFP00020012813	zf-C2H2	PF00096.26	1.6e-27	2	4
ENSCAFP00020012813	zf-C2H2	PF00096.26	1.6e-27	3	4
ENSCAFP00020012813	zf-C2H2	PF00096.26	1.6e-27	4	4
ENSCAFP00020012792	zf-C2H2	PF00096.26	2.5e-27	1	4
ENSCAFP00020012792	zf-C2H2	PF00096.26	2.5e-27	2	4
ENSCAFP00020012792	zf-C2H2	PF00096.26	2.5e-27	3	4
ENSCAFP00020012792	zf-C2H2	PF00096.26	2.5e-27	4	4
ENSCAFP00020012788	zf-C2H2	PF00096.26	2.8e-27	1	4
ENSCAFP00020012788	zf-C2H2	PF00096.26	2.8e-27	2	4
ENSCAFP00020012788	zf-C2H2	PF00096.26	2.8e-27	3	4
ENSCAFP00020012788	zf-C2H2	PF00096.26	2.8e-27	4	4
ENSCAFP00020012813	zf-met	PF12874.7	5.3e-09	1	2
ENSCAFP00020012813	zf-met	PF12874.7	5.3e-09	2	2
ENSCAFP00020012792	zf-met	PF12874.7	2.4e-06	1	2
ENSCAFP00020012792	zf-met	PF12874.7	2.4e-06	2	2
ENSCAFP00020012788	zf-met	PF12874.7	2.5e-06	1	2
ENSCAFP00020012788	zf-met	PF12874.7	2.5e-06	2	2
ENSCAFP00020012805	zf-met	PF12874.7	6.2e-06	1	2
ENSCAFP00020012805	zf-met	PF12874.7	6.2e-06	2	2
ENSCAFP00020012801	zf-met	PF12874.7	6.4e-06	1	2
ENSCAFP00020012801	zf-met	PF12874.7	6.4e-06	2	2
ENSCAFP00020012805	zf-C2H2_jaz	PF12171.8	1.6e-16	1	1
ENSCAFP00020012801	zf-C2H2_jaz	PF12171.8	1.7e-16	1	1
ENSCAFP00020012813	zf-C2H2_jaz	PF12171.8	5.2e-15	1	1
ENSCAFP00020012792	zf-C2H2_jaz	PF12171.8	3.1e-13	1	1
ENSCAFP00020012788	zf-C2H2_jaz	PF12171.8	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020014784	PRDM10-203	3342	-	ENSCAFP00020012801	1113 (aa)	-	-
ENSCAFT00020014796	PRDM10-205	3393	-	ENSCAFP00020012813	1130 (aa)	-	-
ENSCAFT00020014789	PRDM10-204	3318	-	ENSCAFP00020012805	1105 (aa)	-	-
ENSCAFT00020014768	PRDM10-201	3522	-	ENSCAFP00020012788	1173 (aa)	-	-
ENSCAFT00020014772	PRDM10-202	3498	-	ENSCAFP00020012792	1165 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020010152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020010152	PRDM10	60	32.174	ENSCAFG00020017685	PRDM5	99	36.264
ENSCAFG00020010152	PRDM10	53	37.500	ENSCAFG00020015152	ZNF236	64	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020010152	PRDM10	100	94.718	ENSG00000170325	PRDM10	100	94.718	Homo_sapiens
ENSCAFG00020010152	PRDM10	96	97.333	ENSAMEG00000002425	PRDM10	100	92.263	Ailuropoda_melanoleuca
ENSCAFG00020010152	PRDM10	100	82.627	ENSAPLG00000004858	PRDM10	100	82.627	Anas_platyrhynchos
ENSCAFG00020010152	PRDM10	96	94.937	ENSANAG00000022064	PRDM10	91	94.937	Aotus_nancymaae
ENSCAFG00020010152	PRDM10	100	91.816	ENSBTAG00000019001	PRDM10	100	92.188	Bos_taurus
ENSCAFG00020010152	PRDM10	100	92.335	ENSCJAG00000009235	PRDM10	100	92.335	Callithrix_jacchus
ENSCAFG00020010152	PRDM10	100	98.308	ENSCAFG00000010164	PRDM10	100	98.308	Canis_familiaris
ENSCAFG00020010152	PRDM10	100	94.661	ENSCHIG00000026530	PRDM10	100	94.299	Capra_hircus
ENSCAFG00020010152	PRDM10	100	92.863	ENSTSYG00000000544	PRDM10	100	92.863	Carlito_syrichta
ENSCAFG00020010152	PRDM10	100	85.506	ENSCAPG00000017296	PRDM10	98	87.600	Cavia_aperea
ENSCAFG00020010152	PRDM10	98	84.884	ENSCPOG00000000389	PRDM10	98	85.813	Cavia_porcellus
ENSCAFG00020010152	PRDM10	100	92.007	ENSCCAG00000024567	PRDM10	100	92.177	Cebus_capucinus
ENSCAFG00020010152	PRDM10	100	92.945	ENSCATG00000040031	PRDM10	100	92.945	Cercocebus_atys
ENSCAFG00020010152	PRDM10	100	89.661	ENSCLAG00000014605	PRDM10	99	98.718	Chinchilla_lanigera
ENSCAFG00020010152	PRDM10	100	92.596	ENSCSAG00000002202	PRDM10	100	92.936	Chlorocebus_sabaeus
ENSCAFG00020010152	PRDM10	100	83.647	ENSCPBG00000026880	PRDM10	99	80.000	Chrysemys_picta_bellii
ENSCAFG00020010152	PRDM10	100	92.262	ENSCANG00000032669	PRDM10	100	92.432	Colobus_angolensis_palliatus
ENSCAFG00020010152	PRDM10	96	98.667	ENSCGRG00001021647	Prdm10	100	89.525	Cricetulus_griseus_chok1gshd
ENSCAFG00020010152	PRDM10	96	98.667	ENSCGRG00000006562	Prdm10	100	89.525	Cricetulus_griseus_crigri
ENSCAFG00020010152	PRDM10	83	92.089	ENSDNOG00000001366	PRDM10	95	92.089	Dasypus_novemcinctus
ENSCAFG00020010152	PRDM10	96	97.333	ENSDORG00000014292	Prdm10	100	92.453	Dipodomys_ordii
ENSCAFG00020010152	PRDM10	100	94.288	ENSEASG00005022914	PRDM10	100	94.373	Equus_asinus_asinus
ENSCAFG00020010152	PRDM10	100	94.203	ENSECAG00000011499	PRDM10	100	94.288	Equus_caballus
ENSCAFG00020010152	PRDM10	98	94.874	ENSFCAG00000004111	PRDM10	96	94.874	Felis_catus
ENSCAFG00020010152	PRDM10	100	82.900	ENSFALG00000004873	PRDM10	100	79.129	Ficedula_albicollis
ENSCAFG00020010152	PRDM10	96	97.333	ENSFDAG00000017311	PRDM10	97	93.750	Fukomys_damarensis
ENSCAFG00020010152	PRDM10	97	84.615	ENSGALG00000033660	PRDM10	99	83.026	Gallus_gallus
ENSCAFG00020010152	PRDM10	98	65.153	ENSGACG00000012293	prdm10	98	67.949	Gasterosteus_aculeatus
ENSCAFG00020010152	PRDM10	100	82.860	ENSGAGG00000012523	PRDM10	99	81.266	Gopherus_agassizii
ENSCAFG00020010152	PRDM10	100	92.827	ENSGGOG00000015359	PRDM10	100	92.827	Gorilla_gorilla
ENSCAFG00020010152	PRDM10	100	89.638	ENSHGLG00000001106	PRDM10	97	95.000	Heterocephalus_glaber_female
ENSCAFG00020010152	PRDM10	100	89.958	ENSHGLG00100002350	PRDM10	97	95.000	Heterocephalus_glaber_male
ENSCAFG00020010152	PRDM10	100	92.092	ENSSTOG00000002015	PRDM10	100	92.432	Ictidomys_tridecemlineatus
ENSCAFG00020010152	PRDM10	100	80.191	ENSJJAG00000021493	Prdm10	90	92.292	Jaculus_jaculus
ENSCAFG00020010152	PRDM10	100	89.865	ENSLAFG00000031867	PRDM10	100	89.865	Loxodonta_africana
ENSCAFG00020010152	PRDM10	100	92.857	ENSMFAG00000031008	PRDM10	100	92.857	Macaca_fascicularis
ENSCAFG00020010152	PRDM10	100	92.857	ENSMMUG00000017555	PRDM10	100	92.857	Macaca_mulatta
ENSCAFG00020010152	PRDM10	100	92.769	ENSMNEG00000036493	PRDM10	100	92.769	Macaca_nemestrina
ENSCAFG00020010152	PRDM10	90	98.765	ENSMLEG00000042028	PRDM10	98	98.667	Mandrillus_leucophaeus
ENSCAFG00020010152	PRDM10	100	82.266	ENSMGAG00000001112	PRDM10	100	79.704	Meleagris_gallopavo
ENSCAFG00020010152	PRDM10	100	92.340	ENSMICG00000013888	PRDM10	100	92.340	Microcebus_murinus
ENSCAFG00020010152	PRDM10	96	98.667	ENSMOCG00000021853	Prdm10	100	90.878	Microtus_ochrogaster
ENSCAFG00020010152	PRDM10	79	83.407	ENSMODG00000004979	PRDM10	99	86.168	Monodelphis_domestica
ENSCAFG00020010152	PRDM10	96	98.667	ENSMUSG00000042496	Prdm10	100	93.459	Mus_musculus
ENSCAFG00020010152	PRDM10	96	98.667	MGP_SPRETEiJ_G0033061	-	100	90.870	Mus_spretus
ENSCAFG00020010152	PRDM10	100	95.652	ENSMPUG00000008711	PRDM10	99	95.652	Mustela_putorius_furo
ENSCAFG00020010152	PRDM10	100	91.674	ENSMLUG00000013051	PRDM10	100	91.419	Myotis_lucifugus
ENSCAFG00020010152	PRDM10	96	97.333	ENSNGAG00000000580	Prdm10	100	92.710	Nannospalax_galili
ENSCAFG00020010152	PRDM10	100	92.945	ENSNLEG00000007488	PRDM10	100	92.945	Nomascus_leucogenys
ENSCAFG00020010152	PRDM10	100	90.894	ENSODEG00000005309	PRDM10	100	90.894	Octodon_degus
ENSCAFG00020010152	PRDM10	100	78.328	ENSOANG00000000577	-	100	77.304	Ornithorhynchus_anatinus
ENSCAFG00020010152	PRDM10	100	90.716	ENSOCUG00000003736	PRDM10	100	90.716	Oryctolagus_cuniculus
ENSCAFG00020010152	PRDM10	96	96.000	ENSOGAG00000010723	PRDM10	100	91.179	Otolemur_garnettii
ENSCAFG00020010152	PRDM10	100	92.072	ENSOARG00000014507	PRDM10	100	91.731	Ovis_aries
ENSCAFG00020010152	PRDM10	100	92.656	ENSPPAG00000042881	PRDM10	100	92.656	Pan_paniscus
ENSCAFG00020010152	PRDM10	100	94.459	ENSPPRG00000007002	PRDM10	100	94.459	Panthera_pardus
ENSCAFG00020010152	PRDM10	100	94.373	ENSPTIG00000013331	PRDM10	100	94.373	Panthera_tigris_altaica
ENSCAFG00020010152	PRDM10	100	92.827	ENSPTRG00000004477	PRDM10	100	92.827	Pan_troglodytes
ENSCAFG00020010152	PRDM10	100	93.579	ENSPANG00000017470	PRDM10	100	93.579	Papio_anubis
ENSCAFG00020010152	PRDM10	96	97.333	ENSPEMG00000014985	Prdm10	100	90.956	Peromyscus_maniculatus_bairdii
ENSCAFG00020010152	PRDM10	100	92.438	ENSPPYG00000004061	PRDM10	100	92.438	Pongo_abelii
ENSCAFG00020010152	PRDM10	88	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
ENSCAFG00020010152	PRDM10	96	96.203	ENSPCOG00000023406	PRDM10	91	96.203	Propithecus_coquereli
ENSCAFG00020010152	PRDM10	100	93.798	ENSPVAG00000012764	PRDM10	100	93.798	Pteropus_vampyrus
ENSCAFG00020010152	PRDM10	96	98.667	ENSRNOG00000007853	Prdm10	100	91.010	Rattus_norvegicus
ENSCAFG00020010152	PRDM10	100	92.606	ENSRBIG00000030924	PRDM10	100	92.606	Rhinopithecus_bieti
ENSCAFG00020010152	PRDM10	100	92.353	ENSRROG00000034334	PRDM10	100	92.353	Rhinopithecus_roxellana
ENSCAFG00020010152	PRDM10	100	92.430	ENSSBOG00000008773	PRDM10	100	92.430	Saimiri_boliviensis_boliviensis
ENSCAFG00020010152	PRDM10	96	88.608	ENSSHAG00000004503	PRDM10	99	84.856	Sarcophilus_harrisii
ENSCAFG00020010152	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCAFG00020010152	PRDM10	100	84.215	ENSSPUG00000001178	PRDM10	99	84.126	Sphenodon_punctatus
ENSCAFG00020010152	PRDM10	100	91.674	ENSSSCG00000015243	PRDM10	100	91.079	Sus_scrofa
ENSCAFG00020010152	PRDM10	100	82.007	ENSTGUG00000000530	PRDM10	100	81.572	Taeniopygia_guttata
ENSCAFG00020010152	PRDM10	91	97.101	ENSTBEG00000007221	PRDM10	94	92.699	Tupaia_belangeri
ENSCAFG00020010152	PRDM10	100	89.720	ENSTTRG00000009189	PRDM10	100	89.040	Tursiops_truncatus
ENSCAFG00020010152	PRDM10	91	98.715	ENSUAMG00000018832	PRDM10	96	97.718	Ursus_americanus
ENSCAFG00020010152	PRDM10	100	95.589	ENSUMAG00000003167	PRDM10	100	95.589	Ursus_maritimus
ENSCAFG00020010152	PRDM10	100	97.350	ENSVVUG00000019878	PRDM10	100	97.350	Vulpes_vulpes
ENSCAFG00020010152	PRDM10	95	73.621	ENSXETG00000032173	PRDM10	100	67.707	Xenopus_tropicalis