EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020010504 (Gene tree)
Gene ID: 112649692
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 30734 bases
Position: chrQKWQ01002178.1:17131399-17162132
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020014204	RRM_5	PF13893.6	7.5e-07	1	2
ENSCAFP00020014204	RRM_5	PF13893.6	7.5e-07	2	2
ENSCAFP00020014198	RRM_5	PF13893.6	7.6e-07	1	2
ENSCAFP00020014198	RRM_5	PF13893.6	7.6e-07	2	2
ENSCAFP00020013883	RRM_5	PF13893.6	1.4e-06	1	1
ENSCAFP00020013998	RRM_5	PF13893.6	2.1e-06	1	1
ENSCAFP00020014068	RRM_5	PF13893.6	2.2e-06	1	1
ENSCAFP00020014052	RRM_5	PF13893.6	2.3e-06	1	1
ENSCAFP00020014159	RRM_5	PF13893.6	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020016467	-	2733	-	ENSCAFP00020014159	910 (aa)	-	-
ENSCAFT00020016515	-	1704	-	ENSCAFP00020014204	567 (aa)	-	-
ENSCAFT00020016134	-	2487	-	ENSCAFP00020013883	733 (aa)	-	-
ENSCAFT00020016331	-	2649	-	ENSCAFP00020014052	882 (aa)	-	-
ENSCAFT00020016508	-	1716	-	ENSCAFP00020014198	571 (aa)	-	-
ENSCAFT00020016350	-	2592	-	ENSCAFP00020014068	863 (aa)	-	-
ENSCAFT00020016262	-	2535	-	ENSCAFP00020013998	844 (aa)	-	-
ENSCAFT00020016505	-	903	-	ENSCAFP00020014195	300 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020010504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020010504	-	98	98.887	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCAFG00020010504	-	99	99.406	ENSAMEG00000011347	-	99	99.322	Ailuropoda_melanoleuca
ENSCAFG00020010504	-	98	85.912	ENSAPLG00000008118	-	99	80.723	Anas_platyrhynchos
ENSCAFG00020010504	-	98	79.501	ENSACAG00000016233	-	98	73.636	Anolis_carolinensis
ENSCAFG00020010504	-	100	97.749	ENSANAG00000022951	-	100	97.749	Aotus_nancymaae
ENSCAFG00020010504	-	98	72.516	ENSANAG00000024654	-	99	72.516	Aotus_nancymaae
ENSCAFG00020010504	-	94	30.000	ENSAMXG00000010685	matr3l1.1	82	38.514	Astyanax_mexicanus
ENSCAFG00020010504	-	79	46.835	ENSAMXG00000010681	matr3l1.1	85	46.835	Astyanax_mexicanus
ENSCAFG00020010504	-	100	98.815	ENSBTAG00000006756	MATR3	100	98.815	Bos_taurus
ENSCAFG00020010504	-	100	97.630	ENSCJAG00000006888	-	100	97.630	Callithrix_jacchus
ENSCAFG00020010504	-	99	99.765	ENSCAFG00000001345	MATR3	99	99.765	Canis_familiaris
ENSCAFG00020010504	-	98	99.026	ENSCHIG00000025746	-	99	96.948	Capra_hircus
ENSCAFG00020010504	-	98	98.192	ENSTSYG00000011028	-	99	96.127	Carlito_syrichta
ENSCAFG00020010504	-	98	98.470	ENSCPOG00000014076	-	99	96.127	Cavia_porcellus
ENSCAFG00020010504	-	57	47.692	ENSCCAG00000028170	ZNF638	67	31.098	Cebus_capucinus
ENSCAFG00020010504	-	100	98.104	ENSCCAG00000025074	-	100	98.104	Cebus_capucinus
ENSCAFG00020010504	-	51	56.000	ENSCATG00000032207	ZNF638	67	30.864	Cercocebus_atys
ENSCAFG00020010504	-	94	97.749	ENSCATG00000041304	-	97	96.161	Cercocebus_atys
ENSCAFG00020010504	-	98	98.609	ENSCLAG00000015998	-	99	96.362	Chinchilla_lanigera
ENSCAFG00020010504	-	98	98.887	ENSCSAG00000013075	-	99	96.714	Chlorocebus_sabaeus
ENSCAFG00020010504	-	98	84.669	ENSCPBG00000006303	-	99	81.229	Chrysemys_picta_bellii
ENSCAFG00020010504	-	99	98.575	ENSCANG00000028224	-	99	98.531	Colobus_angolensis_palliatus
ENSCAFG00020010504	-	98	98.609	ENSCGRG00001020227	Matr3	99	94.953	Cricetulus_griseus_chok1gshd
ENSCAFG00020010504	-	98	98.470	ENSCGRG00000011298	Matr3	99	94.836	Cricetulus_griseus_crigri
ENSCAFG00020010504	-	88	41.000	ENSCSEG00000012682	matr3l1.1	86	41.000	Cynoglossus_semilaevis
ENSCAFG00020010504	-	81	50.000	ENSCVAG00000005337	matr3l1.1	86	50.000	Cyprinodon_variegatus
ENSCAFG00020010504	-	99	98.104	ENSDNOG00000037723	-	99	98.083	Dasypus_novemcinctus
ENSCAFG00020010504	-	98	99.305	ENSEASG00005020857	-	99	97.066	Equus_asinus_asinus
ENSCAFG00020010504	-	98	99.305	ENSECAG00000012882	MATR3	99	97.066	Equus_caballus
ENSCAFG00020010504	-	74	49.123	ENSELUG00000021848	matr3l1.1	75	50.000	Esox_lucius
ENSCAFG00020010504	-	86	44.118	ENSELUG00000021651	si:ch211-271b14.1	96	44.118	Esox_lucius
ENSCAFG00020010504	-	98	99.722	ENSFCAG00000021911	-	99	97.418	Felis_catus
ENSCAFG00020010504	-	96	85.935	ENSFALG00000003071	-	99	79.607	Ficedula_albicollis
ENSCAFG00020010504	-	98	97.636	ENSFDAG00000017675	-	99	95.540	Fukomys_damarensis
ENSCAFG00020010504	-	98	85.773	ENSGALG00000002478	MATR3	99	80.790	Gallus_gallus
ENSCAFG00020010504	-	98	84.669	ENSGAGG00000011386	-	99	81.051	Gopherus_agassizii
ENSCAFG00020010504	-	100	98.815	ENSGGOG00000007308	-	100	98.815	Gorilla_gorilla
ENSCAFG00020010504	-	98	98.887	ENSHGLG00000004673	MATR3	99	96.714	Heterocephalus_glaber_female
ENSCAFG00020010504	-	88	97.395	ENSHGLG00100006442	-	98	97.395	Heterocephalus_glaber_male
ENSCAFG00020010504	-	60	47.059	ENSHCOG00000013223	matr3l1.1	90	33.466	Hippocampus_comes
ENSCAFG00020010504	-	98	99.166	ENSSTOG00000014746	-	99	96.831	Ictidomys_tridecemlineatus
ENSCAFG00020010504	-	98	98.470	ENSJJAG00000021710	-	99	94.131	Jaculus_jaculus
ENSCAFG00020010504	-	88	68.064	ENSJJAG00000011022	-	97	78.630	Jaculus_jaculus
ENSCAFG00020010504	-	66	39.665	ENSLBEG00000018267	matr3l1.1	83	42.308	Labrus_bergylta
ENSCAFG00020010504	-	98	60.296	ENSLACG00000006743	-	99	57.833	Latimeria_chalumnae
ENSCAFG00020010504	-	100	98.815	ENSMFAG00000000634	-	100	98.815	Macaca_fascicularis
ENSCAFG00020010504	-	99	98.694	ENSMMUG00000016741	MATR3	99	98.644	Macaca_mulatta
ENSCAFG00020010504	-	69	96.825	ENSMMUG00000015963	-	99	96.825	Macaca_mulatta
ENSCAFG00020010504	-	100	97.393	ENSMNEG00000042856	-	100	97.393	Macaca_nemestrina
ENSCAFG00020010504	-	100	97.393	ENSMLEG00000041178	-	100	97.393	Mandrillus_leucophaeus
ENSCAFG00020010504	-	70	53.846	ENSMAMG00000013840	matr3l1.1	76	37.652	Mastacembelus_armatus
ENSCAFG00020010504	-	98	85.635	ENSMGAG00000001331	-	99	80.681	Meleagris_gallopavo
ENSCAFG00020010504	-	98	98.192	ENSMAUG00000011647	Matr3	99	95.775	Mesocricetus_auratus
ENSCAFG00020010504	-	95	96.468	ENSMICG00000012438	-	99	96.252	Microcebus_murinus
ENSCAFG00020010504	-	98	98.470	ENSMOCG00000015711	Matr3	99	94.836	Microtus_ochrogaster
ENSCAFG00020010504	-	96	93.741	ENSMODG00000011925	-	99	87.067	Monodelphis_domestica
ENSCAFG00020010504	-	98	97.775	MGP_CAROLIEiJ_G0022108	Matr3	99	95.775	Mus_caroli
ENSCAFG00020010504	-	98	97.775	ENSMUSG00000037236	Matr3	99	95.775	Mus_musculus
ENSCAFG00020010504	-	98	97.914	MGP_PahariEiJ_G0018842	Matr3	99	94.836	Mus_pahari
ENSCAFG00020010504	-	98	97.775	MGP_SPRETEiJ_G0023020	Matr3	99	95.423	Mus_spretus
ENSCAFG00020010504	-	99	99.296	ENSMPUG00000009297	-	99	99.296	Mustela_putorius_furo
ENSCAFG00020010504	-	98	97.781	ENSMLUG00000005798	-	98	95.785	Myotis_lucifugus
ENSCAFG00020010504	-	98	98.192	ENSNGAG00000017452	Matr3	99	95.070	Nannospalax_galili
ENSCAFG00020010504	-	100	98.815	ENSNLEG00000009093	-	100	98.815	Nomascus_leucogenys
ENSCAFG00020010504	-	98	95.410	ENSOPRG00000016511	-	99	92.655	Ochotona_princeps
ENSCAFG00020010504	-	98	98.887	ENSODEG00000003015	-	99	96.244	Octodon_degus
ENSCAFG00020010504	-	98	98.887	ENSOCUG00000026311	MATR3	99	96.831	Oryctolagus_cuniculus
ENSCAFG00020010504	-	71	36.154	ENSORLG00020009362	matr3l1.1	79	37.037	Oryzias_latipes_hni
ENSCAFG00020010504	-	59	57.692	ENSORLG00015018551	matr3l1.1	79	37.500	Oryzias_latipes_hsok
ENSCAFG00020010504	-	67	38.393	ENSOMEG00000022287	matr3l1.1	90	34.868	Oryzias_melastigma
ENSCAFG00020010504	-	98	99.166	ENSOGAG00000010607	-	99	97.066	Otolemur_garnettii
ENSCAFG00020010504	-	98	99.026	ENSOARG00000016931	-	98	96.948	Ovis_aries
ENSCAFG00020010504	-	94	91.745	ENSPPAG00000026720	-	94	94.670	Pan_paniscus
ENSCAFG00020010504	-	100	98.697	ENSPPAG00000001418	-	100	98.697	Pan_paniscus
ENSCAFG00020010504	-	98	99.722	ENSPPRG00000008004	-	99	97.535	Panthera_pardus
ENSCAFG00020010504	-	94	98.874	ENSPTIG00000010711	-	99	97.423	Panthera_tigris_altaica
ENSCAFG00020010504	-	100	98.697	ENSPTRG00000017294	MATR3	100	98.697	Pan_troglodytes
ENSCAFG00020010504	-	94	97.749	ENSPANG00000032489	-	96	97.749	Papio_anubis
ENSCAFG00020010504	-	99	98.694	ENSPANG00000012018	-	99	98.644	Papio_anubis
ENSCAFG00020010504	-	93	40.000	ENSPKIG00000000333	matr3l1.1	75	40.000	Paramormyrops_kingsleyae
ENSCAFG00020010504	-	98	84.669	ENSPSIG00000014598	-	99	81.140	Pelodiscus_sinensis
ENSCAFG00020010504	-	98	97.642	ENSPEMG00000020679	Matr3	99	95.070	Peromyscus_maniculatus_bairdii
ENSCAFG00020010504	-	99	98.694	ENSPPYG00000015835	-	99	98.644	Pongo_abelii
ENSCAFG00020010504	-	98	98.748	ENSPCOG00000025718	-	99	96.831	Propithecus_coquereli
ENSCAFG00020010504	-	99	98.456	ENSPVAG00000015431	-	100	98.638	Pteropus_vampyrus
ENSCAFG00020010504	-	98	97.636	ENSRNOG00000019875	Matr3	99	94.601	Rattus_norvegicus
ENSCAFG00020010504	-	54	56.000	ENSRBIG00000029826	ZNF638	67	30.864	Rhinopithecus_bieti
ENSCAFG00020010504	-	94	97.936	ENSRBIG00000034713	-	97	96.344	Rhinopithecus_bieti
ENSCAFG00020010504	-	98	97.079	ENSRROG00000043949	-	100	94.444	Rhinopithecus_roxellana
ENSCAFG00020010504	-	99	97.743	ENSRROG00000039415	-	99	97.740	Rhinopithecus_roxellana
ENSCAFG00020010504	-	56	47.692	ENSSBOG00000029960	ZNF638	67	32.278	Saimiri_boliviensis_boliviensis
ENSCAFG00020010504	-	98	98.331	ENSSBOG00000030159	-	99	96.244	Saimiri_boliviensis_boliviensis
ENSCAFG00020010504	-	96	93.741	ENSSHAG00000010331	-	99	86.952	Sarcophilus_harrisii
ENSCAFG00020010504	-	60	53.846	ENSSDUG00000015369	matr3l1.1	73	53.846	Seriola_dumerili
ENSCAFG00020010504	-	98	83.817	ENSSPUG00000019236	-	99	79.847	Sphenodon_punctatus
ENSCAFG00020010504	-	99	98.826	ENSSSCG00000014343	-	99	98.826	Sus_scrofa
ENSCAFG00020010504	-	98	85.359	ENSTGUG00000014568	MATR3	99	79.847	Taeniopygia_guttata
ENSCAFG00020010504	-	51	37.327	ENSTRUG00000001692	-	83	35.317	Takifugu_rubripes
ENSCAFG00020010504	-	76	56.863	ENSTNIG00000003166	matr3l1.1	78	56.863	Tetraodon_nigroviridis
ENSCAFG00020010504	-	99	99.451	ENSUAMG00000000097	-	98	99.451	Ursus_americanus
ENSCAFG00020010504	-	99	98.709	ENSUMAG00000015808	-	99	98.709	Ursus_maritimus
ENSCAFG00020010504	-	99	98.223	ENSVPAG00000006337	-	99	98.196	Vicugna_pacos
ENSCAFG00020010504	-	98	99.722	ENSVVUG00000020287	-	99	97.653	Vulpes_vulpes
ENSCAFG00020010504	-	98	56.913	ENSXETG00000003838	matr3	99	54.754	Xenopus_tropicalis
ENSCAFG00020010504	-	60	59.524	ENSXMAG00000014107	-	71	58.140	Xiphophorus_maculatus