EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020010558 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 6270 bases
Position: chrQKWQ01000898.1:19872918-19879187
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020013149	RRM_1	PF00076.22	8.5e-38	1	3
ENSCAFP00020013149	RRM_1	PF00076.22	8.5e-38	2	3
ENSCAFP00020013149	RRM_1	PF00076.22	8.5e-38	3	3
ENSCAFP00020013145	RRM_1	PF00076.22	1.7e-37	1	3
ENSCAFP00020013145	RRM_1	PF00076.22	1.7e-37	2	3
ENSCAFP00020013145	RRM_1	PF00076.22	1.7e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020015176	RBM47-202	1416	-	ENSCAFP00020013149	471 (aa)	-	-
ENSCAFT00020015170	RBM47-201	1698	-	ENSCAFP00020013145	565 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020010558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020010558	RBM47	65	55.806	ENSCAFG00020001215	-	70	47.222
ENSCAFG00020010558	RBM47	63	55.814	ENSCAFG00020015848	SYNCRIP	79	46.188
ENSCAFG00020010558	RBM47	73	66.667	ENSCAFG00020026421	A1CF	75	74.561
ENSCAFG00020010558	RBM47	65	55.806	ENSCAFG00020019630	-	63	59.615
ENSCAFG00020010558	RBM47	68	69.592	ENSCAFG00020002468	RBM46	61	73.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020010558	RBM47	94	94.695	ENSG00000163694	RBM47	90	96.923	Homo_sapiens
ENSCAFG00020010558	RBM47	94	82.493	ENSAPOG00000011062	rbm47	83	80.894	Acanthochromis_polyacanthus
ENSCAFG00020010558	RBM47	94	95.225	ENSAMEG00000009672	RBM47	87	95.376	Ailuropoda_melanoleuca
ENSCAFG00020010558	RBM47	94	82.493	ENSACIG00000011531	rbm47	83	79.675	Amphilophus_citrinellus
ENSCAFG00020010558	RBM47	94	82.493	ENSAOCG00000022245	rbm47	83	80.855	Amphiprion_ocellaris
ENSCAFG00020010558	RBM47	94	82.493	ENSAPEG00000018304	rbm47	83	80.488	Amphiprion_percula
ENSCAFG00020010558	RBM47	94	80.720	ENSATEG00000018400	rbm47	80	79.837	Anabas_testudineus
ENSCAFG00020010558	RBM47	94	89.211	ENSAPLG00000013974	RBM47	85	91.057	Anas_platyrhynchos
ENSCAFG00020010558	RBM47	94	84.350	ENSACAG00000011833	RBM47	86	84.884	Anolis_carolinensis
ENSCAFG00020010558	RBM47	94	93.899	ENSANAG00000029440	RBM47	90	94.051	Aotus_nancymaae
ENSCAFG00020010558	RBM47	94	81.137	ENSACLG00000016902	rbm47	78	84.986	Astatotilapia_calliptera
ENSCAFG00020010558	RBM47	94	79.897	ENSAMXG00000021794	rbm47	81	82.584	Astyanax_mexicanus
ENSCAFG00020010558	RBM47	94	95.588	ENSBTAG00000002356	RBM47	87	95.728	Bos_taurus
ENSCAFG00020010558	RBM47	94	94.164	ENSCJAG00000019385	RBM47	90	94.051	Callithrix_jacchus
ENSCAFG00020010558	RBM47	94	100.000	ENSCAFG00000015898	RBM47	87	100.000	Canis_familiaris
ENSCAFG00020010558	RBM47	94	95.588	ENSCHIG00000026214	RBM47	87	95.922	Capra_hircus
ENSCAFG00020010558	RBM47	76	79.535	ENSTSYG00000033612	RBM47	77	92.086	Carlito_syrichta
ENSCAFG00020010558	RBM47	94	94.118	ENSCAPG00000008426	RBM47	75	93.722	Cavia_aperea
ENSCAFG00020010558	RBM47	94	94.118	ENSCPOG00000014100	RBM47	83	96.122	Cavia_porcellus
ENSCAFG00020010558	RBM47	91	65.511	ENSCCAG00000024397	-	82	64.777	Cebus_capucinus
ENSCAFG00020010558	RBM47	94	93.634	ENSCCAG00000030129	-	90	93.768	Cebus_capucinus
ENSCAFG00020010558	RBM47	94	94.695	ENSCATG00000042064	RBM47	90	94.618	Cercocebus_atys
ENSCAFG00020010558	RBM47	94	94.164	ENSCLAG00000001684	RBM47	86	94.853	Chinchilla_lanigera
ENSCAFG00020010558	RBM47	94	94.695	ENSCSAG00000017060	RBM47	83	94.118	Chlorocebus_sabaeus
ENSCAFG00020010558	RBM47	79	87.640	ENSCHOG00000011731	RBM47	71	87.915	Choloepus_hoffmanni
ENSCAFG00020010558	RBM47	94	89.153	ENSCPBG00000013831	RBM47	82	91.242	Chrysemys_picta_bellii
ENSCAFG00020010558	RBM47	94	94.430	ENSCANG00000019997	RBM47	90	94.334	Colobus_angolensis_palliatus
ENSCAFG00020010558	RBM47	94	86.607	ENSCGRG00001020102	-	81	87.736	Cricetulus_griseus_chok1gshd
ENSCAFG00020010558	RBM47	94	91.293	ENSCGRG00001000623	-	84	92.727	Cricetulus_griseus_chok1gshd
ENSCAFG00020010558	RBM47	94	90.765	ENSCGRG00000007762	-	86	94.853	Cricetulus_griseus_crigri
ENSCAFG00020010558	RBM47	94	86.161	ENSCGRG00000014760	-	81	87.736	Cricetulus_griseus_crigri
ENSCAFG00020010558	RBM47	94	81.003	ENSCSEG00000004545	rbm47	83	77.688	Cynoglossus_semilaevis
ENSCAFG00020010558	RBM47	89	84.419	ENSCVAG00000020144	rbm47	78	84.703	Cyprinodon_variegatus
ENSCAFG00020010558	RBM47	94	79.897	ENSDARG00000061985	rbm47	81	83.333	Danio_rerio
ENSCAFG00020010558	RBM47	94	92.857	ENSDNOG00000046854	RBM47	83	94.908	Dasypus_novemcinctus
ENSCAFG00020010558	RBM47	94	94.286	ENSDORG00000010144	Rbm47	83	94.556	Dipodomys_ordii
ENSCAFG00020010558	RBM47	90	94.203	ENSETEG00000009194	RBM47	83	94.130	Echinops_telfairi
ENSCAFG00020010558	RBM47	92	60.762	ENSEBUG00000011912	rbm47	75	70.944	Eptatretus_burgeri
ENSCAFG00020010558	RBM47	94	93.651	ENSEASG00005008443	RBM47	87	96.117	Equus_asinus_asinus
ENSCAFG00020010558	RBM47	94	93.651	ENSECAG00000004400	RBM47	87	96.117	Equus_caballus
ENSCAFG00020010558	RBM47	65	94.853	ENSEEUG00000001194	RBM47	58	96.154	Erinaceus_europaeus
ENSCAFG00020010558	RBM47	94	79.494	ENSELUG00000006148	rbm47	78	84.358	Esox_lucius
ENSCAFG00020010558	RBM47	94	95.225	ENSFCAG00000012399	RBM47	87	95.331	Felis_catus
ENSCAFG00020010558	RBM47	94	89.418	ENSFALG00000002861	RBM47	83	91.260	Ficedula_albicollis
ENSCAFG00020010558	RBM47	94	90.716	ENSFDAG00000016326	RBM47	83	93.265	Fukomys_damarensis
ENSCAFG00020010558	RBM47	94	81.963	ENSFHEG00000007938	rbm47	83	79.226	Fundulus_heteroclitus
ENSCAFG00020010558	RBM47	94	79.747	ENSGMOG00000014802	rbm47	80	78.138	Gadus_morhua
ENSCAFG00020010558	RBM47	80	88.889	ENSGALG00000014267	RBM47	94	91.525	Gallus_gallus
ENSCAFG00020010558	RBM47	80	81.698	ENSGAFG00000020571	rbm47	93	84.136	Gambusia_affinis
ENSCAFG00020010558	RBM47	94	78.772	ENSGACG00000016223	rbm47	77	81.586	Gasterosteus_aculeatus
ENSCAFG00020010558	RBM47	94	89.153	ENSGAGG00000020051	RBM47	82	91.446	Gopherus_agassizii
ENSCAFG00020010558	RBM47	94	94.695	ENSGGOG00000001367	RBM47	90	94.618	Gorilla_gorilla
ENSCAFG00020010558	RBM47	94	81.137	ENSHBUG00000003520	rbm47	78	84.986	Haplochromis_burtoni
ENSCAFG00020010558	RBM47	94	69.438	ENSHGLG00000016914	RBM47	86	93.382	Heterocephalus_glaber_female
ENSCAFG00020010558	RBM47	94	91.236	ENSHGLG00100014028	-	86	93.382	Heterocephalus_glaber_male
ENSCAFG00020010558	RBM47	94	89.706	ENSHGLG00100003071	-	86	87.347	Heterocephalus_glaber_male
ENSCAFG00020010558	RBM47	94	76.739	ENSHCOG00000002074	rbm47	82	78.732	Hippocampus_comes
ENSCAFG00020010558	RBM47	94	80.637	ENSIPUG00000004743	rbm47	83	82.720	Ictalurus_punctatus
ENSCAFG00020010558	RBM47	94	94.366	ENSSTOG00000004727	RBM47	86	92.647	Ictidomys_tridecemlineatus
ENSCAFG00020010558	RBM47	94	92.308	ENSJJAG00000013823	Rbm47	87	92.456	Jaculus_jaculus
ENSCAFG00020010558	RBM47	94	83.069	ENSKMAG00000000084	rbm47	86	78.058	Kryptolebias_marmoratus
ENSCAFG00020010558	RBM47	94	80.526	ENSLBEG00000008436	rbm47	78	81.870	Labrus_bergylta
ENSCAFG00020010558	RBM47	94	85.224	ENSLACG00000007196	RBM47	82	86.122	Latimeria_chalumnae
ENSCAFG00020010558	RBM47	94	85.411	ENSLOCG00000012966	rbm47	79	82.077	Lepisosteus_oculatus
ENSCAFG00020010558	RBM47	94	93.369	ENSLAFG00000011998	RBM47	83	94.512	Loxodonta_africana
ENSCAFG00020010558	RBM47	94	94.695	ENSMFAG00000037967	RBM47	90	94.618	Macaca_fascicularis
ENSCAFG00020010558	RBM47	94	94.695	ENSMMUG00000012036	RBM47	89	96.491	Macaca_mulatta
ENSCAFG00020010558	RBM47	94	94.430	ENSMNEG00000040774	RBM47	90	94.334	Macaca_nemestrina
ENSCAFG00020010558	RBM47	81	94.953	ENSMLEG00000041432	RBM47	93	96.928	Mandrillus_leucophaeus
ENSCAFG00020010558	RBM47	94	80.928	ENSMAMG00000019143	rbm47	78	84.986	Mastacembelus_armatus
ENSCAFG00020010558	RBM47	94	81.137	ENSMZEG00005023659	rbm47	81	80.122	Maylandia_zebra
ENSCAFG00020010558	RBM47	94	88.624	ENSMGAG00000012226	RBM47	82	90.650	Meleagris_gallopavo
ENSCAFG00020010558	RBM47	94	92.857	ENSMAUG00000006493	Rbm47	86	94.853	Mesocricetus_auratus
ENSCAFG00020010558	RBM47	94	90.186	ENSMICG00000026417	RBM47	83	91.224	Microcebus_murinus
ENSCAFG00020010558	RBM47	94	92.857	ENSMOCG00000021170	Rbm47	86	94.853	Microtus_ochrogaster
ENSCAFG00020010558	RBM47	94	80.155	ENSMMOG00000007260	rbm47	80	78.615	Mola_mola
ENSCAFG00020010558	RBM47	65	81.410	ENSMODG00000015426	-	96	79.288	Monodelphis_domestica
ENSCAFG00020010558	RBM47	94	81.360	ENSMODG00000020561	-	89	78.571	Monodelphis_domestica
ENSCAFG00020010558	RBM47	94	89.855	ENSMODG00000007003	RBM47	83	92.261	Monodelphis_domestica
ENSCAFG00020010558	RBM47	94	80.371	ENSMALG00000005167	rbm47	78	84.136	Monopterus_albus
ENSCAFG00020010558	RBM47	94	94.203	MGP_CAROLIEiJ_G0027258	Rbm47	86	94.853	Mus_caroli
ENSCAFG00020010558	RBM47	94	94.203	ENSMUSG00000070780	Rbm47	86	94.853	Mus_musculus
ENSCAFG00020010558	RBM47	94	94.203	MGP_PahariEiJ_G0017040	Rbm47	86	94.853	Mus_pahari
ENSCAFG00020010558	RBM47	94	94.118	MGP_SPRETEiJ_G0028253	Rbm47	86	94.853	Mus_spretus
ENSCAFG00020010558	RBM47	94	94.960	ENSMPUG00000006177	RBM47	78	96.341	Mustela_putorius_furo
ENSCAFG00020010558	RBM47	94	92.612	ENSMLUG00000000889	RBM47	83	92.480	Myotis_lucifugus
ENSCAFG00020010558	RBM47	94	91.799	ENSNGAG00000003325	Rbm47	83	93.117	Nannospalax_galili
ENSCAFG00020010558	RBM47	94	81.395	ENSNBRG00000015092	rbm47	81	80.567	Neolamprologus_brichardi
ENSCAFG00020010558	RBM47	94	94.695	ENSNLEG00000017151	RBM47	90	94.618	Nomascus_leucogenys
ENSCAFG00020010558	RBM47	76	91.341	ENSMEUG00000009516	-	98	86.019	Notamacropus_eugenii
ENSCAFG00020010558	RBM47	78	97.015	ENSOPRG00000016507	-	57	97.015	Ochotona_princeps
ENSCAFG00020010558	RBM47	94	94.164	ENSODEG00000004873	RBM47	83	95.714	Octodon_degus
ENSCAFG00020010558	RBM47	94	80.513	ENSONIG00000009061	rbm47	80	79.226	Oreochromis_niloticus
ENSCAFG00020010558	RBM47	91	87.234	ENSOANG00000008978	RBM47	82	90.612	Ornithorhynchus_anatinus
ENSCAFG00020010558	RBM47	94	95.588	ENSOCUG00000012034	RBM47	83	96.327	Oryctolagus_cuniculus
ENSCAFG00020010558	RBM47	94	82.804	ENSORLG00000005847	rbm47	78	82.720	Oryzias_latipes
ENSCAFG00020010558	RBM47	94	82.804	ENSORLG00020005154	rbm47	78	82.720	Oryzias_latipes_hni
ENSCAFG00020010558	RBM47	94	82.804	ENSORLG00015000066	rbm47	83	78.615	Oryzias_latipes_hsok
ENSCAFG00020010558	RBM47	94	82.493	ENSOMEG00000010730	rbm47	82	79.430	Oryzias_melastigma
ENSCAFG00020010558	RBM47	94	94.960	ENSOGAG00000029367	-	83	96.341	Otolemur_garnettii
ENSCAFG00020010558	RBM47	94	86.737	ENSOGAG00000025193	-	83	87.347	Otolemur_garnettii
ENSCAFG00020010558	RBM47	94	94.118	ENSOARG00000012711	RBM47	86	86.990	Ovis_aries
ENSCAFG00020010558	RBM47	94	94.695	ENSPPAG00000029763	RBM47	90	94.618	Pan_paniscus
ENSCAFG00020010558	RBM47	94	91.011	ENSPPRG00000012873	RBM47	80	96.884	Panthera_pardus
ENSCAFG00020010558	RBM47	75	96.853	ENSPTIG00000017046	RBM47	92	90.359	Panthera_tigris_altaica
ENSCAFG00020010558	RBM47	94	94.695	ENSPTRG00000016006	RBM47	90	94.618	Pan_troglodytes
ENSCAFG00020010558	RBM47	94	94.695	ENSPANG00000005980	RBM47	90	94.618	Papio_anubis
ENSCAFG00020010558	RBM47	92	78.719	ENSPKIG00000013431	RBM47	76	83.569	Paramormyrops_kingsleyae
ENSCAFG00020010558	RBM47	89	85.836	ENSPKIG00000005037	rbm47	82	83.099	Paramormyrops_kingsleyae
ENSCAFG00020010558	RBM47	94	88.889	ENSPSIG00000017516	RBM47	90	90.631	Pelodiscus_sinensis
ENSCAFG00020010558	RBM47	89	85.795	ENSPMGG00000018540	rbm47	82	76.939	Periophthalmus_magnuspinnatus
ENSCAFG00020010558	RBM47	94	91.549	ENSPEMG00000011088	Rbm47	83	93.522	Peromyscus_maniculatus_bairdii
ENSCAFG00020010558	RBM47	89	85.393	ENSPFOG00000007997	rbm47	80	80.325	Poecilia_formosa
ENSCAFG00020010558	RBM47	89	85.112	ENSPLAG00000002072	rbm47	81	84.136	Poecilia_latipinna
ENSCAFG00020010558	RBM47	94	81.963	ENSPMEG00000017492	rbm47	83	80.527	Poecilia_mexicana
ENSCAFG00020010558	RBM47	89	86.119	ENSPREG00000008456	rbm47	81	84.419	Poecilia_reticulata
ENSCAFG00020010558	RBM47	92	90.141	ENSPPYG00000014688	RBM47	84	85.513	Pongo_abelii
ENSCAFG00020010558	RBM47	82	92.969	ENSPCAG00000011879	RBM47	64	95.767	Procavia_capensis
ENSCAFG00020010558	RBM47	94	94.157	ENSPCOG00000023451	RBM47	83	95.714	Propithecus_coquereli
ENSCAFG00020010558	RBM47	94	92.754	ENSPVAG00000003812	RBM47	83	94.929	Pteropus_vampyrus
ENSCAFG00020010558	RBM47	94	81.137	ENSPNYG00000022868	rbm47	81	79.637	Pundamilia_nyererei
ENSCAFG00020010558	RBM47	91	76.281	ENSPNAG00000007940	rbm47	81	83.427	Pygocentrus_nattereri
ENSCAFG00020010558	RBM47	94	94.203	ENSRNOG00000002408	Rbm47	83	93.699	Rattus_norvegicus
ENSCAFG00020010558	RBM47	94	94.430	ENSRBIG00000039601	RBM47	90	94.334	Rhinopithecus_bieti
ENSCAFG00020010558	RBM47	94	94.430	ENSRROG00000044696	RBM47	90	94.334	Rhinopithecus_roxellana
ENSCAFG00020010558	RBM47	89	95.000	ENSSBOG00000028475	RBM47	95	94.372	Saimiri_boliviensis_boliviensis
ENSCAFG00020010558	RBM47	94	89.655	ENSSHAG00000017576	RBM47	83	92.041	Sarcophilus_harrisii
ENSCAFG00020010558	RBM47	94	80.879	ENSSFOG00015012445	rbm47	84	80.214	Scleropages_formosus
ENSCAFG00020010558	RBM47	87	78.745	ENSSFOG00015024101	RBM47	81	77.551	Scleropages_formosus
ENSCAFG00020010558	RBM47	94	79.434	ENSSMAG00000009744	rbm47	78	83.003	Scophthalmus_maximus
ENSCAFG00020010558	RBM47	94	82.493	ENSSDUG00000022684	rbm47	82	80.041	Seriola_dumerili
ENSCAFG00020010558	RBM47	94	82.493	ENSSLDG00000003109	rbm47	83	80.244	Seriola_lalandi_dorsalis
ENSCAFG00020010558	RBM47	80	92.651	ENSSARG00000001735	RBM47	71	94.601	Sorex_araneus
ENSCAFG00020010558	RBM47	94	87.003	ENSSPUG00000007515	RBM47	82	87.755	Sphenodon_punctatus
ENSCAFG00020010558	RBM47	94	83.024	ENSSPAG00000001257	rbm47	83	80.244	Stegastes_partitus
ENSCAFG00020010558	RBM47	94	94.118	ENSSSCG00000008796	RBM47	87	95.534	Sus_scrofa
ENSCAFG00020010558	RBM47	94	89.706	ENSTGUG00000008705	RBM47	83	91.650	Taeniopygia_guttata
ENSCAFG00020010558	RBM47	94	81.698	ENSTRUG00000014050	rbm47	83	77.393	Takifugu_rubripes
ENSCAFG00020010558	RBM47	94	81.186	ENSTNIG00000006127	rbm47	80	78.571	Tetraodon_nigroviridis
ENSCAFG00020010558	RBM47	80	89.655	ENSTBEG00000001607	RBM47	60	89.518	Tupaia_belangeri
ENSCAFG00020010558	RBM47	94	92.593	ENSTTRG00000002839	RBM47	87	95.340	Tursiops_truncatus
ENSCAFG00020010558	RBM47	94	95.714	ENSUAMG00000021346	RBM47	87	96.124	Ursus_americanus
ENSCAFG00020010558	RBM47	94	98.408	ENSVVUG00000014774	RBM47	87	98.638	Vulpes_vulpes
ENSCAFG00020010558	RBM47	94	85.526	ENSXETG00000012802	rbm47	87	87.500	Xenopus_tropicalis
ENSCAFG00020010558	RBM47	94	77.528	ENSXCOG00000000780	rbm47	81	83.853	Xiphophorus_couchianus
ENSCAFG00020010558	RBM47	94	81.432	ENSXMAG00000009874	rbm47	83	79.226	Xiphophorus_maculatus