EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020010621 (Gene tree)
Gene ID: 112671095
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 10421 bases
Position: chrQKWQ01001341.1:8283200-8293620
Accession: 112671095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020013218	PseudoU_synth_2	PF00849.22	8.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020015249	RPUSD4-201	1137	-	ENSCAFP00020013218	378 (aa)	XP_025320770	UPI00004BFF31

Gene Model

Click here to download ENSCAFG00020010621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020010621	RPUSD4	73	32.432	ENSCAFG00020008582	RPUSD3	86	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020010621	RPUSD4	100	80.159	ENSG00000165526	RPUSD4	100	80.159	Homo_sapiens
ENSCAFG00020010621	RPUSD4	86	52.870	ENSAPOG00000011024	rpusd4	77	54.545	Acanthochromis_polyacanthus
ENSCAFG00020010621	RPUSD4	62	88.288	ENSAMEG00000005953	-	100	88.288	Ailuropoda_melanoleuca
ENSCAFG00020010621	RPUSD4	100	88.360	ENSAMEG00000000127	-	100	88.360	Ailuropoda_melanoleuca
ENSCAFG00020010621	RPUSD4	86	50.909	ENSACIG00000003533	rpusd4	89	52.961	Amphilophus_citrinellus
ENSCAFG00020010621	RPUSD4	88	51.445	ENSAOCG00000015409	rpusd4	85	51.156	Amphiprion_ocellaris
ENSCAFG00020010621	RPUSD4	88	51.734	ENSAPEG00000018935	rpusd4	85	51.445	Amphiprion_percula
ENSCAFG00020010621	RPUSD4	88	51.156	ENSATEG00000008059	rpusd4	85	50.000	Anabas_testudineus
ENSCAFG00020010621	RPUSD4	73	60.932	ENSAPLG00000013250	RPUSD4	99	59.661	Anas_platyrhynchos
ENSCAFG00020010621	RPUSD4	91	62.139	ENSACAG00000000189	RPUSD4	94	62.139	Anolis_carolinensis
ENSCAFG00020010621	RPUSD4	98	79.839	ENSANAG00000024050	RPUSD4	99	79.839	Aotus_nancymaae
ENSCAFG00020010621	RPUSD4	86	53.799	ENSACLG00000020996	rpusd4	84	53.191	Astatotilapia_calliptera
ENSCAFG00020010621	RPUSD4	85	51.988	ENSAMXG00000031479	rpusd4	85	54.125	Astyanax_mexicanus
ENSCAFG00020010621	RPUSD4	100	78.628	ENSBTAG00000020900	RPUSD4	100	78.628	Bos_taurus
ENSCAFG00020010621	RPUSD4	98	79.784	ENSCJAG00000042850	RPUSD4	93	79.784	Callithrix_jacchus
ENSCAFG00020010621	RPUSD4	100	100.000	ENSCAFG00000010488	RPUSD4	100	100.000	Canis_familiaris
ENSCAFG00020010621	RPUSD4	100	78.947	ENSCHIG00000009975	RPUSD4	100	78.947	Capra_hircus
ENSCAFG00020010621	RPUSD4	100	84.392	ENSTSYG00000008456	RPUSD4	100	84.392	Carlito_syrichta
ENSCAFG00020010621	RPUSD4	68	78.682	ENSCAPG00000006040	RPUSD4	100	78.682	Cavia_aperea
ENSCAFG00020010621	RPUSD4	100	79.365	ENSCPOG00000014971	RPUSD4	100	79.365	Cavia_porcellus
ENSCAFG00020010621	RPUSD4	98	79.570	ENSCCAG00000027838	RPUSD4	99	79.570	Cebus_capucinus
ENSCAFG00020010621	RPUSD4	100	80.423	ENSCATG00000041570	RPUSD4	100	80.423	Cercocebus_atys
ENSCAFG00020010621	RPUSD4	100	82.540	ENSCLAG00000016553	RPUSD4	100	82.540	Chinchilla_lanigera
ENSCAFG00020010621	RPUSD4	100	80.688	ENSCSAG00000002274	RPUSD4	100	80.688	Chlorocebus_sabaeus
ENSCAFG00020010621	RPUSD4	75	83.746	ENSCHOG00000010249	RPUSD4	100	83.746	Choloepus_hoffmanni
ENSCAFG00020010621	RPUSD4	75	68.531	ENSCPBG00000011175	RPUSD4	99	68.531	Chrysemys_picta_bellii
ENSCAFG00020010621	RPUSD4	71	43.165	ENSCSAVG00000000872	-	54	43.165	Ciona_savignyi
ENSCAFG00020010621	RPUSD4	100	78.836	ENSCANG00000039684	RPUSD4	100	78.836	Colobus_angolensis_palliatus
ENSCAFG00020010621	RPUSD4	100	80.423	ENSCGRG00001024141	Rpusd4	100	80.423	Cricetulus_griseus_chok1gshd
ENSCAFG00020010621	RPUSD4	100	80.423	ENSCGRG00000014415	Rpusd4	100	80.423	Cricetulus_griseus_crigri
ENSCAFG00020010621	RPUSD4	86	52.568	ENSCVAG00000008761	rpusd4	88	51.156	Cyprinodon_variegatus
ENSCAFG00020010621	RPUSD4	88	51.445	ENSCVAG00000000392	rpusd4	98	51.445	Cyprinodon_variegatus
ENSCAFG00020010621	RPUSD4	92	48.424	ENSDARG00000012674	rpusd4	97	48.424	Danio_rerio
ENSCAFG00020010621	RPUSD4	100	79.101	ENSDNOG00000020026	RPUSD4	100	79.101	Dasypus_novemcinctus
ENSCAFG00020010621	RPUSD4	100	81.217	ENSDORG00000016717	Rpusd4	100	81.217	Dipodomys_ordii
ENSCAFG00020010621	RPUSD4	99	79.733	ENSETEG00000013953	RPUSD4	99	79.467	Echinops_telfairi
ENSCAFG00020010621	RPUSD4	100	84.392	ENSEASG00005022982	RPUSD4	100	84.392	Equus_asinus_asinus
ENSCAFG00020010621	RPUSD4	100	84.127	ENSECAG00000000557	RPUSD4	100	84.127	Equus_caballus
ENSCAFG00020010621	RPUSD4	81	81.720	ENSEEUG00000014036	RPUSD4	81	81.720	Erinaceus_europaeus
ENSCAFG00020010621	RPUSD4	95	53.125	ENSELUG00000008075	rpusd4	80	59.223	Esox_lucius
ENSCAFG00020010621	RPUSD4	100	85.450	ENSFCAG00000029789	RPUSD4	100	85.450	Felis_catus
ENSCAFG00020010621	RPUSD4	87	58.735	ENSFALG00000005171	RPUSD4	98	58.559	Ficedula_albicollis
ENSCAFG00020010621	RPUSD4	98	81.989	ENSFDAG00000014307	RPUSD4	98	81.989	Fukomys_damarensis
ENSCAFG00020010621	RPUSD4	88	51.445	ENSFHEG00000004329	rpusd4	89	51.445	Fundulus_heteroclitus
ENSCAFG00020010621	RPUSD4	85	51.227	ENSGMOG00000017726	rpusd4	96	50.613	Gadus_morhua
ENSCAFG00020010621	RPUSD4	87	57.910	ENSGALG00000024326	RPUSD4	95	58.112	Gallus_gallus
ENSCAFG00020010621	RPUSD4	90	48.851	ENSGAFG00000021559	rpusd4	88	48.276	Gambusia_affinis
ENSCAFG00020010621	RPUSD4	85	50.920	ENSGACG00000001657	rpusd4	100	51.042	Gasterosteus_aculeatus
ENSCAFG00020010621	RPUSD4	88	63.988	ENSGAGG00000000132	RPUSD4	93	63.393	Gopherus_agassizii
ENSCAFG00020010621	RPUSD4	100	80.688	ENSGGOG00000016494	RPUSD4	100	80.688	Gorilla_gorilla
ENSCAFG00020010621	RPUSD4	86	53.799	ENSHBUG00000022838	rpusd4	84	53.191	Haplochromis_burtoni
ENSCAFG00020010621	RPUSD4	100	80.952	ENSHGLG00000002285	RPUSD4	100	80.952	Heterocephalus_glaber_female
ENSCAFG00020010621	RPUSD4	100	80.952	ENSHGLG00100006385	RPUSD4	100	80.952	Heterocephalus_glaber_male
ENSCAFG00020010621	RPUSD4	86	53.191	ENSHCOG00000006612	rpusd4	83	53.191	Hippocampus_comes
ENSCAFG00020010621	RPUSD4	90	50.992	ENSIPUG00000023879	rusd4	91	50.992	Ictalurus_punctatus
ENSCAFG00020010621	RPUSD4	97	81.918	ENSSTOG00000025280	RPUSD4	100	81.918	Ictidomys_tridecemlineatus
ENSCAFG00020010621	RPUSD4	98	82.842	ENSJJAG00000018673	Rpusd4	99	82.574	Jaculus_jaculus
ENSCAFG00020010621	RPUSD4	86	54.683	ENSKMAG00000021805	rpusd4	86	54.683	Kryptolebias_marmoratus
ENSCAFG00020010621	RPUSD4	85	52.744	ENSLBEG00000020394	rpusd4	91	52.744	Labrus_bergylta
ENSCAFG00020010621	RPUSD4	85	64.815	ENSLACG00000011028	RPUSD4	82	64.815	Latimeria_chalumnae
ENSCAFG00020010621	RPUSD4	92	47.309	ENSLOCG00000003124	rpusd4	92	47.309	Lepisosteus_oculatus
ENSCAFG00020010621	RPUSD4	100	80.952	ENSLAFG00000005211	RPUSD4	100	80.952	Loxodonta_africana
ENSCAFG00020010621	RPUSD4	100	80.423	ENSMFAG00000039513	RPUSD4	100	80.423	Macaca_fascicularis
ENSCAFG00020010621	RPUSD4	100	80.159	ENSMMUG00000007933	RPUSD4	100	80.159	Macaca_mulatta
ENSCAFG00020010621	RPUSD4	100	80.159	ENSMNEG00000027414	RPUSD4	100	80.159	Macaca_nemestrina
ENSCAFG00020010621	RPUSD4	100	79.894	ENSMLEG00000042461	RPUSD4	100	79.894	Mandrillus_leucophaeus
ENSCAFG00020010621	RPUSD4	86	50.599	ENSMAMG00000023839	rpusd4	86	50.599	Mastacembelus_armatus
ENSCAFG00020010621	RPUSD4	86	53.799	ENSMZEG00005011999	rpusd4	84	53.191	Maylandia_zebra
ENSCAFG00020010621	RPUSD4	74	61.786	ENSMGAG00000000840	RPUSD4	99	58.642	Meleagris_gallopavo
ENSCAFG00020010621	RPUSD4	100	79.630	ENSMAUG00000010280	Rpusd4	100	79.630	Mesocricetus_auratus
ENSCAFG00020010621	RPUSD4	100	82.804	ENSMICG00000015979	RPUSD4	100	82.804	Microcebus_murinus
ENSCAFG00020010621	RPUSD4	100	78.307	ENSMOCG00000000661	Rpusd4	100	78.307	Microtus_ochrogaster
ENSCAFG00020010621	RPUSD4	81	54.984	ENSMMOG00000021731	rpusd4	88	56.522	Mola_mola
ENSCAFG00020010621	RPUSD4	87	76.147	ENSMODG00000004521	RPUSD4	84	76.147	Monodelphis_domestica
ENSCAFG00020010621	RPUSD4	80	53.571	ENSMALG00000005839	rpusd4	93	53.571	Monopterus_albus
ENSCAFG00020010621	RPUSD4	100	78.571	MGP_CAROLIEiJ_G0031954	Rpusd4	100	78.571	Mus_caroli
ENSCAFG00020010621	RPUSD4	100	78.307	ENSMUSG00000032044	Rpusd4	100	78.307	Mus_musculus
ENSCAFG00020010621	RPUSD4	100	79.101	MGP_PahariEiJ_G0014819	Rpusd4	100	79.101	Mus_pahari
ENSCAFG00020010621	RPUSD4	100	78.307	MGP_SPRETEiJ_G0033078	Rpusd4	100	78.307	Mus_spretus
ENSCAFG00020010621	RPUSD4	99	87.131	ENSMPUG00000006608	RPUSD4	99	87.131	Mustela_putorius_furo
ENSCAFG00020010621	RPUSD4	90	84.503	ENSMLUG00000017328	-	97	81.522	Myotis_lucifugus
ENSCAFG00020010621	RPUSD4	67	84.646	ENSMLUG00000029348	-	100	84.646	Myotis_lucifugus
ENSCAFG00020010621	RPUSD4	99	81.233	ENSNGAG00000020847	Rpusd4	99	81.233	Nannospalax_galili
ENSCAFG00020010621	RPUSD4	87	53.754	ENSNBRG00000005207	rpusd4	96	53.153	Neolamprologus_brichardi
ENSCAFG00020010621	RPUSD4	98	80.914	ENSNLEG00000007465	RPUSD4	98	80.914	Nomascus_leucogenys
ENSCAFG00020010621	RPUSD4	93	72.000	ENSMEUG00000004370	RPUSD4	94	72.000	Notamacropus_eugenii
ENSCAFG00020010621	RPUSD4	70	60.150	ENSOPRG00000013141	-	75	86.301	Ochotona_princeps
ENSCAFG00020010621	RPUSD4	100	79.894	ENSODEG00000004577	RPUSD4	100	79.894	Octodon_degus
ENSCAFG00020010621	RPUSD4	94	51.524	ENSONIG00000018879	rpusd4	97	50.970	Oreochromis_niloticus
ENSCAFG00020010621	RPUSD4	77	67.119	ENSOANG00000007247	RPUSD4	95	67.003	Ornithorhynchus_anatinus
ENSCAFG00020010621	RPUSD4	99	81.067	ENSOCUG00000017039	RPUSD4	99	81.067	Oryctolagus_cuniculus
ENSCAFG00020010621	RPUSD4	89	49.563	ENSORLG00000002750	rpusd4	83	52.980	Oryzias_latipes
ENSCAFG00020010621	RPUSD4	87	50.450	ENSORLG00020002044	rpusd4	75	52.649	Oryzias_latipes_hni
ENSCAFG00020010621	RPUSD4	87	50.751	ENSORLG00015020034	rpusd4	75	53.311	Oryzias_latipes_hsok
ENSCAFG00020010621	RPUSD4	86	52.537	ENSOMEG00000004861	rpusd4	82	52.537	Oryzias_melastigma
ENSCAFG00020010621	RPUSD4	100	80.418	ENSOGAG00000008922	RPUSD4	100	80.418	Otolemur_garnettii
ENSCAFG00020010621	RPUSD4	98	79.245	ENSOARG00000012238	RPUSD4	99	78.628	Ovis_aries
ENSCAFG00020010621	RPUSD4	100	80.423	ENSPPAG00000042883	RPUSD4	93	80.423	Pan_paniscus
ENSCAFG00020010621	RPUSD4	100	85.185	ENSPPRG00000003081	RPUSD4	100	85.185	Panthera_pardus
ENSCAFG00020010621	RPUSD4	100	85.185	ENSPTIG00000012059	RPUSD4	100	85.185	Panthera_tigris_altaica
ENSCAFG00020010621	RPUSD4	100	80.159	ENSPTRG00000004454	RPUSD4	100	80.159	Pan_troglodytes
ENSCAFG00020010621	RPUSD4	100	80.688	ENSPANG00000015040	RPUSD4	100	80.688	Papio_anubis
ENSCAFG00020010621	RPUSD4	89	58.580	ENSPKIG00000023986	rpusd4	86	58.112	Paramormyrops_kingsleyae
ENSCAFG00020010621	RPUSD4	79	66.333	ENSPSIG00000014268	RPUSD4	95	66.333	Pelodiscus_sinensis
ENSCAFG00020010621	RPUSD4	85	50.760	ENSPMGG00000002806	rpusd4	85	51.148	Periophthalmus_magnuspinnatus
ENSCAFG00020010621	RPUSD4	100	73.280	ENSPEMG00000000278	Rpusd4	100	73.280	Peromyscus_maniculatus_bairdii
ENSCAFG00020010621	RPUSD4	80	44.910	ENSPMAG00000008183	rpusd4	97	44.776	Petromyzon_marinus
ENSCAFG00020010621	RPUSD4	93	73.864	ENSPCIG00000010212	RPUSD4	93	75.294	Phascolarctos_cinereus
ENSCAFG00020010621	RPUSD4	90	50.000	ENSPFOG00000019030	rpusd4	81	52.412	Poecilia_formosa
ENSCAFG00020010621	RPUSD4	90	50.862	ENSPLAG00000016848	rpusd4	78	53.398	Poecilia_latipinna
ENSCAFG00020010621	RPUSD4	90	49.425	ENSPMEG00000017534	rpusd4	78	51.780	Poecilia_mexicana
ENSCAFG00020010621	RPUSD4	87	50.445	ENSPREG00000005689	rpusd4	76	52.685	Poecilia_reticulata
ENSCAFG00020010621	RPUSD4	100	80.423	ENSPPYG00000004043	RPUSD4	100	80.423	Pongo_abelii
ENSCAFG00020010621	RPUSD4	80	77.717	ENSPCAG00000000753	RPUSD4	81	77.717	Procavia_capensis
ENSCAFG00020010621	RPUSD4	98	76.882	ENSPCOG00000020694	RPUSD4	100	76.882	Propithecus_coquereli
ENSCAFG00020010621	RPUSD4	100	82.011	ENSPVAG00000000988	RPUSD4	100	82.011	Pteropus_vampyrus
ENSCAFG00020010621	RPUSD4	86	52.888	ENSPNYG00000009652	rpusd4	84	52.280	Pundamilia_nyererei
ENSCAFG00020010621	RPUSD4	85	51.852	ENSPNAG00000012264	rpusd4	80	53.642	Pygocentrus_nattereri
ENSCAFG00020010621	RPUSD4	100	79.365	ENSRNOG00000011567	Rpusd4	100	79.365	Rattus_norvegicus
ENSCAFG00020010621	RPUSD4	96	81.215	ENSRBIG00000034842	RPUSD4	100	79.630	Rhinopithecus_bieti
ENSCAFG00020010621	RPUSD4	96	81.215	ENSRROG00000039753	RPUSD4	100	79.630	Rhinopithecus_roxellana
ENSCAFG00020010621	RPUSD4	98	79.784	ENSSBOG00000030413	RPUSD4	99	79.784	Saimiri_boliviensis_boliviensis
ENSCAFG00020010621	RPUSD4	80	75.415	ENSSHAG00000008304	RPUSD4	99	75.415	Sarcophilus_harrisii
ENSCAFG00020010621	RPUSD4	88	56.932	ENSSFOG00015006203	rpusd4	92	56.932	Scleropages_formosus
ENSCAFG00020010621	RPUSD4	92	50.000	ENSSMAG00000020978	rpusd4	92	50.000	Scophthalmus_maximus
ENSCAFG00020010621	RPUSD4	87	49.851	ENSSDUG00000013399	rpusd4	80	52.303	Seriola_dumerili
ENSCAFG00020010621	RPUSD4	87	49.552	ENSSLDG00000023507	rpusd4	80	52.303	Seriola_lalandi_dorsalis
ENSCAFG00020010621	RPUSD4	89	60.882	ENSSPUG00000001401	RPUSD4	92	63.393	Sphenodon_punctatus
ENSCAFG00020010621	RPUSD4	93	50.526	ENSSPAG00000012163	rpusd4	97	50.526	Stegastes_partitus
ENSCAFG00020010621	RPUSD4	99	82.353	ENSSSCG00000015233	RPUSD4	99	82.353	Sus_scrofa
ENSCAFG00020010621	RPUSD4	79	61.204	ENSTGUG00000000773	RPUSD4	99	61.204	Taeniopygia_guttata
ENSCAFG00020010621	RPUSD4	86	52.424	ENSTRUG00000012283	rpusd4	84	52.424	Takifugu_rubripes
ENSCAFG00020010621	RPUSD4	86	52.424	ENSTNIG00000014676	rpusd4	86	51.613	Tetraodon_nigroviridis
ENSCAFG00020010621	RPUSD4	100	80.952	ENSTTRG00000001555	RPUSD4	100	80.952	Tursiops_truncatus
ENSCAFG00020010621	RPUSD4	100	87.831	ENSUMAG00000002219	RPUSD4	100	87.831	Ursus_maritimus
ENSCAFG00020010621	RPUSD4	70	84.586	ENSVPAG00000001066	RPUSD4	100	84.586	Vicugna_pacos
ENSCAFG00020010621	RPUSD4	100	97.884	ENSVVUG00000020101	RPUSD4	100	97.884	Vulpes_vulpes
ENSCAFG00020010621	RPUSD4	87	51.632	ENSXCOG00000004676	rpusd4	80	53.074	Xiphophorus_couchianus
ENSCAFG00020010621	RPUSD4	93	49.322	ENSXMAG00000023351	rpusd4	94	48.780	Xiphophorus_maculatus