EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAFG00020010939 (Gene tree)
Gene ID
112642463
Gene Symbol
PRPF38A
Alias
FLJ14936|Prp38
Full Name
pre-mRNA processing factor 38A
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Minus strand
Length
14057 bases
Position
chrQKWQ01002063.1:8984260-8998316
Accession
112642463
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020013603PRP38PF03371.151.8e-6211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020015735PRPF38A-201939-ENSCAFP00020013603312 (aa)XP_025275855UPI000006D9C2
Gene Model
Click here to download ENSCAFG00020010939's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020010939's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020010939PRPF38A100100.000ENSG00000134748PRPF38A100100.000Homo_sapiens
ENSCAFG00020010939PRPF38A7188.688ENSAPOG00000011652prpf38a10081.789Acanthochromis_polyacanthus
ENSCAFG00020010939PRPF38A100100.000ENSAMEG00000009319PRPF38A100100.000Ailuropoda_melanoleuca
ENSCAFG00020010939PRPF38A7186.425ENSACIG00000012292prpf38a7685.714Amphilophus_citrinellus
ENSCAFG00020010939PRPF38A7188.688ENSAOCG00000018004prpf38a10081.789Amphiprion_ocellaris
ENSCAFG00020010939PRPF38A7188.688ENSAPEG00000021414prpf38a10081.789Amphiprion_percula
ENSCAFG00020010939PRPF38A7189.140ENSATEG00000004608prpf38a10081.789Anabas_testudineus
ENSCAFG00020010939PRPF38A7997.571ENSAPLG00000005827PRPF38A9997.571Anas_platyrhynchos
ENSCAFG00020010939PRPF38A10095.833ENSACAG00000008249PRPF38A10095.833Anolis_carolinensis
ENSCAFG00020010939PRPF38A10067.722ENSANAG00000029204-10062.342Aotus_nancymaae
ENSCAFG00020010939PRPF38A100100.000ENSANAG00000027839PRPF38A100100.000Aotus_nancymaae
ENSCAFG00020010939PRPF38A7186.425ENSACLG00000021595prpf38a10080.192Astatotilapia_calliptera
ENSCAFG00020010939PRPF38A10082.428ENSAMXG00000029274prpf38a10082.428Astyanax_mexicanus
ENSCAFG00020010939PRPF38A100100.000ENSBTAG00000002720PRPF38A100100.000Bos_taurus
ENSCAFG00020010939PRPF38A6362.564WBGene00008380prp-386761.574Caenorhabditis_elegans
ENSCAFG00020010939PRPF38A100100.000ENSCJAG00000021594PRPF38A100100.000Callithrix_jacchus
ENSCAFG00020010939PRPF38A100100.000ENSCAFG00000003740PRPF38A100100.000Canis_familiaris
ENSCAFG00020010939PRPF38A100100.000ENSCHIG00000024730PRPF38A100100.000Capra_hircus
ENSCAFG00020010939PRPF38A100100.000ENSTSYG00000009868-100100.000Carlito_syrichta
ENSCAFG00020010939PRPF38A8698.885ENSTSYG00000031994-9598.885Carlito_syrichta
ENSCAFG00020010939PRPF38A100100.000ENSCPOG00000005079PRPF38A100100.000Cavia_porcellus
ENSCAFG00020010939PRPF38A10099.679ENSCCAG00000026502PRPF38A10099.679Cebus_capucinus
ENSCAFG00020010939PRPF38A100100.000ENSCATG00000032296PRPF38A100100.000Cercocebus_atys
ENSCAFG00020010939PRPF38A10064.423ENSCATG00000044190-10063.141Cercocebus_atys
ENSCAFG00020010939PRPF38A100100.000ENSCLAG00000005816PRPF38A100100.000Chinchilla_lanigera
ENSCAFG00020010939PRPF38A7897.917ENSCHOG00000008388PRPF38A7797.917Choloepus_hoffmanni
ENSCAFG00020010939PRPF38A10098.077ENSCPBG00000014791PRPF38A10098.077Chrysemys_picta_bellii
ENSCAFG00020010939PRPF38A6771.429ENSCSAVG00000009580-7865.678Ciona_savignyi
ENSCAFG00020010939PRPF38A96100.000ENSCANG00000032608PRPF38A100100.000Colobus_angolensis_palliatus
ENSCAFG00020010939PRPF38A7484.848ENSCGRG00001002557-7884.848Cricetulus_griseus_chok1gshd
ENSCAFG00020010939PRPF38A10099.679ENSCGRG00001018502-10099.679Cricetulus_griseus_chok1gshd
ENSCAFG00020010939PRPF38A10099.679ENSCGRG00000014868Prpf38a10099.679Cricetulus_griseus_crigri
ENSCAFG00020010939PRPF38A7187.783ENSCSEG00000001269prpf38a7987.013Cynoglossus_semilaevis
ENSCAFG00020010939PRPF38A7190.498ENSCVAG00000012305prpf38a10082.428Cyprinodon_variegatus
ENSCAFG00020010939PRPF38A10081.789ENSDARG00000039213prpf38a10081.789Danio_rerio
ENSCAFG00020010939PRPF38A100100.000ENSDNOG00000042326PRPF38A100100.000Dasypus_novemcinctus
ENSCAFG00020010939PRPF38A8483.270ENSDORG00000025371-7887.665Dipodomys_ordii
ENSCAFG00020010939PRPF38A10086.538ENSDORG00000023857-10086.538Dipodomys_ordii
ENSCAFG00020010939PRPF38A8483.270ENSDORG00000023691-7887.665Dipodomys_ordii
ENSCAFG00020010939PRPF38A6375.635FBgn0050342Prp385776.596Drosophila_melanogaster
ENSCAFG00020010939PRPF38A7681.092ENSEBUG00000012588prpf38a7581.116Eptatretus_burgeri
ENSCAFG00020010939PRPF38A100100.000ENSEASG00005014427PRPF38A100100.000Equus_asinus_asinus
ENSCAFG00020010939PRPF38A100100.000ENSECAG00000022628PRPF38A100100.000Equus_caballus
ENSCAFG00020010939PRPF38A7186.878ENSELUG00000021094prpf38a10080.511Esox_lucius
ENSCAFG00020010939PRPF38A100100.000ENSFCAG00000002518PRPF38A100100.000Felis_catus
ENSCAFG00020010939PRPF38A8796.679ENSFALG00000005598-10096.679Ficedula_albicollis
ENSCAFG00020010939PRPF38A9984.887ENSFALG00000003612-7790.043Ficedula_albicollis
ENSCAFG00020010939PRPF38A10099.679ENSFDAG00000011287PRPF38A10099.679Fukomys_damarensis
ENSCAFG00020010939PRPF38A8478.788ENSFHEG00000014317prpf38a7888.745Fundulus_heteroclitus
ENSCAFG00020010939PRPF38A5394.578ENSGMOG00000011384prpf38a5494.578Gadus_morhua
ENSCAFG00020010939PRPF38A10097.756ENSGALG00000010627PRPF38A10097.756Gallus_gallus
ENSCAFG00020010939PRPF38A7190.498ENSGAFG00000012422prpf38a10082.428Gambusia_affinis
ENSCAFG00020010939PRPF38A7186.099ENSGACG00000005423prpf38a10079.365Gasterosteus_aculeatus
ENSCAFG00020010939PRPF38A10098.397ENSGAGG00000020547PRPF38A10098.397Gopherus_agassizii
ENSCAFG00020010939PRPF38A100100.000ENSGGOG00000003940PRPF38A100100.000Gorilla_gorilla
ENSCAFG00020010939PRPF38A6191.005ENSHBUG00000020572prpf38a8090.957Haplochromis_burtoni
ENSCAFG00020010939PRPF38A100100.000ENSHGLG00000000475PRPF38A100100.000Heterocephalus_glaber_female
ENSCAFG00020010939PRPF38A10083.654ENSHGLG00000007918-10083.333Heterocephalus_glaber_female
ENSCAFG00020010939PRPF38A100100.000ENSHGLG00100008935PRPF38A100100.000Heterocephalus_glaber_male
ENSCAFG00020010939PRPF38A10083.654ENSHGLG00100003928-10083.333Heterocephalus_glaber_male
ENSCAFG00020010939PRPF38A8769.373ENSHCOG00000020781prpf38a5990.957Hippocampus_comes
ENSCAFG00020010939PRPF38A7487.500ENSIPUG00000005757prpf38a7587.500Ictalurus_punctatus
ENSCAFG00020010939PRPF38A100100.000ENSSTOG00000015610PRPF38A100100.000Ictidomys_tridecemlineatus
ENSCAFG00020010939PRPF38A10098.718ENSJJAG00000015811Prpf38a10098.718Jaculus_jaculus
ENSCAFG00020010939PRPF38A7190.045ENSKMAG00000006588prpf38a10082.109Kryptolebias_marmoratus
ENSCAFG00020010939PRPF38A9679.195ENSLBEG00000020585prpf38a10079.553Labrus_bergylta
ENSCAFG00020010939PRPF38A10092.308ENSLACG00000011495PRPF38A10092.308Latimeria_chalumnae
ENSCAFG00020010939PRPF38A10080.192ENSLOCG00000006262prpf38a10081.470Lepisosteus_oculatus
ENSCAFG00020010939PRPF38A100100.000ENSLAFG00000025862PRPF38A100100.000Loxodonta_africana
ENSCAFG00020010939PRPF38A100100.000ENSMFAG00000039449PRPF38A100100.000Macaca_fascicularis
ENSCAFG00020010939PRPF38A8799.265ENSMMUG00000014333PRPF38A9899.265Macaca_mulatta
ENSCAFG00020010939PRPF38A10064.744ENSMNEG00000040242-10063.782Macaca_nemestrina
ENSCAFG00020010939PRPF38A100100.000ENSMNEG00000031221PRPF38A100100.000Macaca_nemestrina
ENSCAFG00020010939PRPF38A100100.000ENSMLEG00000041105PRPF38A100100.000Mandrillus_leucophaeus
ENSCAFG00020010939PRPF38A7188.235ENSMAMG00000015431prpf38a10081.470Mastacembelus_armatus
ENSCAFG00020010939PRPF38A7186.425ENSMZEG00005017838prpf38a10080.192Maylandia_zebra
ENSCAFG00020010939PRPF38A9697.659ENSMGAG00000011176PRPF38A10097.659Meleagris_gallopavo
ENSCAFG00020010939PRPF38A8594.697ENSMAUG00000018029-8794.805Mesocricetus_auratus
ENSCAFG00020010939PRPF38A100100.000ENSMICG00000014193PRPF38A100100.000Microcebus_murinus
ENSCAFG00020010939PRPF38A10099.679ENSMOCG00000013080Prpf38a10099.679Microtus_ochrogaster
ENSCAFG00020010939PRPF38A8381.783ENSMMOG00000016972prpf38a8187.446Mola_mola
ENSCAFG00020010939PRPF38A10098.403ENSMODG00000000644PRPF38A10098.403Monodelphis_domestica
ENSCAFG00020010939PRPF38A7188.235ENSMALG00000019363prpf38a9781.470Monopterus_albus
ENSCAFG00020010939PRPF38A10098.718MGP_CAROLIEiJ_G0026269Prpf38a10098.718Mus_caroli
ENSCAFG00020010939PRPF38A10098.718ENSMUSG00000063800Prpf38a10098.718Mus_musculus
ENSCAFG00020010939PRPF38A10098.718MGP_PahariEiJ_G0028602Prpf38a10098.718Mus_pahari
ENSCAFG00020010939PRPF38A10098.397MGP_SPRETEiJ_G0027238Prpf38a10098.522Mus_spretus
ENSCAFG00020010939PRPF38A100100.000ENSMPUG00000006896PRPF38A100100.000Mustela_putorius_furo
ENSCAFG00020010939PRPF38A10099.679ENSNGAG00000011884Prpf38a10099.679Nannospalax_galili
ENSCAFG00020010939PRPF38A7185.068ENSNBRG00000004013prpf38a7484.416Neolamprologus_brichardi
ENSCAFG00020010939PRPF38A10067.308ENSNLEG00000033398-9467.308Nomascus_leucogenys
ENSCAFG00020010939PRPF38A9773.841ENSNLEG00000012592-9973.841Nomascus_leucogenys
ENSCAFG00020010939PRPF38A93100.000ENSNLEG00000017999PRPF38A93100.000Nomascus_leucogenys
ENSCAFG00020010939PRPF38A10094.872ENSMEUG00000003860PRPF38A10094.872Notamacropus_eugenii
ENSCAFG00020010939PRPF38A7799.583ENSOPRG00000008985PRPF38A10099.583Ochotona_princeps
ENSCAFG00020010939PRPF38A100100.000ENSODEG00000005869PRPF38A100100.000Octodon_degus
ENSCAFG00020010939PRPF38A7186.878ENSONIG00000007816prpf38a10080.511Oreochromis_niloticus
ENSCAFG00020010939PRPF38A10064.968ENSOANG00000009541-10064.968Ornithorhynchus_anatinus
ENSCAFG00020010939PRPF38A100100.000ENSOCUG00000000963PRPF38A100100.000Oryctolagus_cuniculus
ENSCAFG00020010939PRPF38A9682.333ENSORLG00000013485prpf38a9982.372Oryzias_latipes
ENSCAFG00020010939PRPF38A9682.333ENSORLG00020002130prpf38a9982.372Oryzias_latipes_hni
ENSCAFG00020010939PRPF38A9682.000ENSORLG00015021393prpf38a9982.051Oryzias_latipes_hsok
ENSCAFG00020010939PRPF38A9681.879ENSOMEG00000016333prpf38a10081.789Oryzias_melastigma
ENSCAFG00020010939PRPF38A100100.000ENSOGAG00000005423PRPF38A100100.000Otolemur_garnettii
ENSCAFG00020010939PRPF38A100100.000ENSOARG00000005373PRPF38A100100.000Ovis_aries
ENSCAFG00020010939PRPF38A10077.564ENSPPAG00000033867-10077.564Pan_paniscus
ENSCAFG00020010939PRPF38A100100.000ENSPPAG00000030905PRPF38A100100.000Pan_paniscus
ENSCAFG00020010939PRPF38A100100.000ENSPPRG00000013268PRPF38A100100.000Panthera_pardus
ENSCAFG00020010939PRPF38A100100.000ENSPTIG00000015419PRPF38A100100.000Panthera_tigris_altaica
ENSCAFG00020010939PRPF38A100100.000ENSPTRG00000000739PRPF38A100100.000Pan_troglodytes
ENSCAFG00020010939PRPF38A100100.000ENSPANG00000015483PRPF38A100100.000Papio_anubis
ENSCAFG00020010939PRPF38A10078.846ENSPKIG00000011439prpf38a10080.128Paramormyrops_kingsleyae
ENSCAFG00020010939PRPF38A10097.756ENSPSIG00000017487PRPF38A10097.756Pelodiscus_sinensis
ENSCAFG00020010939PRPF38A7089.401ENSPMGG00000021352prpf38a9978.641Periophthalmus_magnuspinnatus
ENSCAFG00020010939PRPF38A10099.679ENSPEMG00000023277-10099.679Peromyscus_maniculatus_bairdii
ENSCAFG00020010939PRPF38A10093.651ENSPEMG00000011212-10093.651Peromyscus_maniculatus_bairdii
ENSCAFG00020010939PRPF38A10098.083ENSPCIG00000022369-10098.083Phascolarctos_cinereus
ENSCAFG00020010939PRPF38A8381.467ENSPFOG00000004248prpf38a10082.428Poecilia_formosa
ENSCAFG00020010939PRPF38A9277.055ENSPLAG00000010328prpf38a10082.428Poecilia_latipinna
ENSCAFG00020010939PRPF38A8479.323ENSPMEG00000011804prpf38a10082.428Poecilia_mexicana
ENSCAFG00020010939PRPF38A9573.667ENSPREG00000002835prpf38a5894.149Poecilia_reticulata
ENSCAFG00020010939PRPF38A10091.483ENSPPYG00000001348PRPF38A10091.483Pongo_abelii
ENSCAFG00020010939PRPF38A10099.359ENSPCAG00000013328PRPF38A10099.359Procavia_capensis
ENSCAFG00020010939PRPF38A10076.923ENSPCOG00000020709-7681.385Propithecus_coquereli
ENSCAFG00020010939PRPF38A100100.000ENSPCOG00000016387-100100.000Propithecus_coquereli
ENSCAFG00020010939PRPF38A100100.000ENSPVAG00000009803PRPF38A100100.000Pteropus_vampyrus
ENSCAFG00020010939PRPF38A7186.425ENSPNYG00000005571prpf38a10080.192Pundamilia_nyererei
ENSCAFG00020010939PRPF38A10082.428ENSPNAG00000010399prpf38a10082.428Pygocentrus_nattereri
ENSCAFG00020010939PRPF38A10099.359ENSRNOG00000009451Prpf38a10099.359Rattus_norvegicus
ENSCAFG00020010939PRPF38A10062.500ENSRBIG00000034053-10059.295Rhinopithecus_bieti
ENSCAFG00020010939PRPF38A100100.000ENSRBIG00000036442PRPF38A100100.000Rhinopithecus_bieti
ENSCAFG00020010939PRPF38A100100.000ENSRROG00000032788PRPF38A100100.000Rhinopithecus_roxellana
ENSCAFG00020010939PRPF38A9878.758ENSRROG00000040003-9978.758Rhinopithecus_roxellana
ENSCAFG00020010939PRPF38A100100.000ENSSBOG00000019515PRPF38A100100.000Saimiri_boliviensis_boliviensis
ENSCAFG00020010939PRPF38A9671.053ENSSHAG00000006029-7481.900Sarcophilus_harrisii
ENSCAFG00020010939PRPF38A8797.786ENSSHAG00000006906-10097.786Sarcophilus_harrisii
ENSCAFG00020010939PRPF38A10078.914ENSSFOG00015013572prpf38a10079.553Scleropages_formosus
ENSCAFG00020010939PRPF38A7188.688ENSSMAG00000015379prpf38a7587.879Scophthalmus_maximus
ENSCAFG00020010939PRPF38A7189.140ENSSDUG00000001324prpf38a10082.109Seriola_dumerili
ENSCAFG00020010939PRPF38A7189.140ENSSLDG00000014803prpf38a10082.109Seriola_lalandi_dorsalis
ENSCAFG00020010939PRPF38A10082.692ENSSARG00000014458PRPF38A10082.692Sorex_araneus
ENSCAFG00020010939PRPF38A10096.154ENSSPUG00000013259PRPF38A10096.154Sphenodon_punctatus
ENSCAFG00020010939PRPF38A7170.588ENSSPAG00000010449prpf38a10064.103Stegastes_partitus
ENSCAFG00020010939PRPF38A100100.000ENSSSCG00000028288PRPF38A100100.000Sus_scrofa
ENSCAFG00020010939PRPF38A10093.590ENSTGUG00000008995PRPF38A10093.590Taeniopygia_guttata
ENSCAFG00020010939PRPF38A7188.235ENSTRUG00000003374prpf38a7187.446Takifugu_rubripes
ENSCAFG00020010939PRPF38A7186.547ENSTNIG00000005533prpf38a10080.000Tetraodon_nigroviridis
ENSCAFG00020010939PRPF38A10099.359ENSTBEG00000000725PRPF38A10099.359Tupaia_belangeri
ENSCAFG00020010939PRPF38A100100.000ENSTTRG00000016139PRPF38A100100.000Tursiops_truncatus
ENSCAFG00020010939PRPF38A100100.000ENSUAMG00000000625PRPF38A100100.000Ursus_americanus
ENSCAFG00020010939PRPF38A100100.000ENSUMAG00000022674PRPF38A100100.000Ursus_maritimus
ENSCAFG00020010939PRPF38A7499.567ENSVPAG00000000907PRPF38A10094.231Vicugna_pacos
ENSCAFG00020010939PRPF38A100100.000ENSVVUG00000004475PRPF38A100100.000Vulpes_vulpes
ENSCAFG00020010939PRPF38A10084.345ENSXETG00000008060prpf38a10088.179Xenopus_tropicalis
ENSCAFG00020010939PRPF38A7188.341ENSXCOG00000007393prpf38a7787.554Xiphophorus_couchianus
ENSCAFG00020010939PRPF38A7190.498ENSXMAG00000026143prpf38a10082.428Xiphophorus_maculatus

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