EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020011358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 267 bases
Position: chrQKWQ01001577.1:593631-593897
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020014047	RRM_1	PF00076.22	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020016325	-	267	-	ENSCAFP00020014047	88 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020011358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020011358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020011358	-	84	64.865	ENSCAFG00020024265	-	60	64.865
ENSCAFG00020011358	-	98	69.767	ENSCAFG00020014898	SNRPA	79	67.532
ENSCAFG00020011358	-	93	68.293	ENSCAFG00020017913	-	85	68.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020011358	-	98	69.767	ENSG00000077312	SNRPA	89	67.532	Homo_sapiens
ENSCAFG00020011358	-	89	82.051	ENSAPOG00000015161	snrpb2	81	82.051	Acanthochromis_polyacanthus
ENSCAFG00020011358	-	89	82.051	ENSAPOG00000014688	-	81	82.051	Acanthochromis_polyacanthus
ENSCAFG00020011358	-	93	67.073	ENSCJAG00000045570	-	88	67.073	Callithrix_jacchus
ENSCAFG00020011358	-	94	66.265	ENSCAFG00000031370	-	50	66.265	Canis_familiaris
ENSCAFG00020011358	-	98	69.767	ENSCATG00000032716	SNRPA	86	62.651	Cercocebus_atys
ENSCAFG00020011358	-	98	69.767	ENSCANG00000038637	SNRPA	79	67.532	Colobus_angolensis_palliatus
ENSCAFG00020011358	-	98	69.767	ENSMFAG00000041710	SNRPA	86	62.651	Macaca_fascicularis
ENSCAFG00020011358	-	98	69.767	ENSMMUG00000022024	SNRPA	81	67.532	Macaca_mulatta
ENSCAFG00020011358	-	98	69.767	ENSMLEG00000039593	SNRPA	86	62.651	Mandrillus_leucophaeus
ENSCAFG00020011358	-	99	95.402	MGP_CAROLIEiJ_G0024372	Snrpb2	61	95.402	Mus_caroli
ENSCAFG00020011358	-	99	95.402	ENSMUSG00000008333	Snrpb2	61	95.402	Mus_musculus
ENSCAFG00020011358	-	99	95.402	MGP_PahariEiJ_G0025817	Snrpb2	61	95.402	Mus_pahari
ENSCAFG00020011358	-	99	95.402	MGP_SPRETEiJ_G0025291	Snrpb2	61	95.402	Mus_spretus
ENSCAFG00020011358	-	88	67.532	ENSODEG00000000626	-	78	67.532	Octodon_degus
ENSCAFG00020011358	-	98	69.767	ENSPANG00000023874	SNRPA	86	62.651	Papio_anubis
ENSCAFG00020011358	-	98	69.767	ENSPCOG00000025196	SNRPA	77	67.532	Propithecus_coquereli
ENSCAFG00020011358	-	98	69.767	ENSRBIG00000008335	SNRPA	79	67.532	Rhinopithecus_bieti
ENSCAFG00020011358	-	98	69.767	ENSRROG00000042727	SNRPA	79	67.532	Rhinopithecus_roxellana
ENSCAFG00020011358	-	92	30.864	YIR009W	MSL1	72	30.864	Saccharomyces_cerevisiae
ENSCAFG00020011358	-	98	69.767	ENSSBOG00000034722	SNRPA	55	67.532	Saimiri_boliviensis_boliviensis
ENSCAFG00020011358	-	88	67.532	ENSUAMG00000003002	-	84	67.532	Ursus_americanus
ENSCAFG00020011358	-	90	75.949	ENSUMAG00000000069	-	60	75.949	Ursus_maritimus
ENSCAFG00020011358	-	98	69.767	ENSVVUG00000005647	SNRPA	79	67.532	Vulpes_vulpes
ENSCAFG00020011358	-	88	63.636	ENSVVUG00000014183	-	66	66.216	Vulpes_vulpes
ENSCAFG00020011358	-	85	66.667	ENSXCOG00000012134	-	79	66.667	Xiphophorus_couchianus