EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020011505 (Gene tree)
Gene ID: 112651885
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 8546 bases
Position: chrQKWQ01001938.1:30120356-30128901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020014218	Nop16	PF09420.10	3.4e-22	1	2
ENSCAFP00020014218	Nop16	PF09420.10	3.4e-22	2	2
ENSCAFP00020014216	Nop16	PF09420.10	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020016531	-	471	-	ENSCAFP00020014216	156 (aa)	-	-
ENSCAFT00020016534	-	567	-	ENSCAFP00020014218	188 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020011505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020011505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020011505	-	90	51.765	ENSAPOG00000010682	-	96	51.765	Acanthochromis_polyacanthus
ENSCAFG00020011505	-	94	96.591	ENSAMEG00000006988	-	99	96.591	Ailuropoda_melanoleuca
ENSCAFG00020011505	-	90	52.941	ENSACIG00000019263	nop16	95	52.941	Amphilophus_citrinellus
ENSCAFG00020011505	-	90	52.353	ENSAOCG00000005504	nop16	96	52.353	Amphiprion_ocellaris
ENSCAFG00020011505	-	90	52.353	ENSAPEG00000006605	nop16	96	52.353	Amphiprion_percula
ENSCAFG00020011505	-	90	53.529	ENSATEG00000014089	nop16	95	53.529	Anabas_testudineus
ENSCAFG00020011505	-	94	68.750	ENSACAG00000006333	-	99	68.750	Anolis_carolinensis
ENSCAFG00020011505	-	94	92.614	ENSANAG00000015743	-	99	92.614	Aotus_nancymaae
ENSCAFG00020011505	-	94	85.227	ENSANAG00000027410	-	99	85.227	Aotus_nancymaae
ENSCAFG00020011505	-	90	53.529	ENSACLG00000025227	nop16	95	53.529	Astatotilapia_calliptera
ENSCAFG00020011505	-	89	44.311	ENSAMXG00000006843	nop16	95	44.311	Astyanax_mexicanus
ENSCAFG00020011505	-	94	94.318	ENSBTAG00000010734	NOP16	99	94.318	Bos_taurus
ENSCAFG00020011505	-	63	30.935	WBGene00013958	ZK265.6	74	30.935	Caenorhabditis_elegans
ENSCAFG00020011505	-	94	100.000	ENSCAFG00000016694	NOP16	99	100.000	Canis_familiaris
ENSCAFG00020011505	-	94	94.318	ENSCHIG00000022082	-	99	94.318	Capra_hircus
ENSCAFG00020011505	-	94	94.886	ENSTSYG00000030409	-	99	94.886	Carlito_syrichta
ENSCAFG00020011505	-	94	76.136	ENSTSYG00000032690	-	99	76.136	Carlito_syrichta
ENSCAFG00020011505	-	94	91.477	ENSCPOG00000026072	-	99	91.477	Cavia_porcellus
ENSCAFG00020011505	-	88	87.591	ENSCCAG00000026775	-	93	90.000	Cebus_capucinus
ENSCAFG00020011505	-	94	92.614	ENSCLAG00000015405	-	99	92.614	Chinchilla_lanigera
ENSCAFG00020011505	-	94	95.455	ENSCSAG00000009400	-	99	95.455	Chlorocebus_sabaeus
ENSCAFG00020011505	-	94	74.719	ENSCPBG00000022647	-	99	74.719	Chrysemys_picta_bellii
ENSCAFG00020011505	-	91	44.571	ENSCING00000006179	-	94	44.571	Ciona_intestinalis
ENSCAFG00020011505	-	84	43.671	ENSCSAVG00000000269	-	87	43.671	Ciona_savignyi
ENSCAFG00020011505	-	94	92.614	ENSCGRG00001004259	Nop16	99	92.614	Cricetulus_griseus_chok1gshd
ENSCAFG00020011505	-	94	92.614	ENSCGRG00000010975	Nop16	99	92.614	Cricetulus_griseus_crigri
ENSCAFG00020011505	-	90	50.000	ENSCSEG00000020523	nop16	97	50.000	Cynoglossus_semilaevis
ENSCAFG00020011505	-	90	52.353	ENSCVAG00000020140	nop16	95	52.353	Cyprinodon_variegatus
ENSCAFG00020011505	-	93	48.023	ENSDARG00000044402	nop16	99	48.023	Danio_rerio
ENSCAFG00020011505	-	94	93.750	ENSDNOG00000042890	-	99	93.750	Dasypus_novemcinctus
ENSCAFG00020011505	-	94	90.341	ENSDORG00000008872	Nop16	99	90.341	Dipodomys_ordii
ENSCAFG00020011505	-	96	43.915	ENSEBUG00000011196	nop16	100	43.915	Eptatretus_burgeri
ENSCAFG00020011505	-	94	95.455	ENSEASG00005011988	-	99	95.455	Equus_asinus_asinus
ENSCAFG00020011505	-	94	96.591	ENSECAG00000021354	NOP16	99	96.591	Equus_caballus
ENSCAFG00020011505	-	93	55.429	ENSELUG00000000401	nop16	98	55.429	Esox_lucius
ENSCAFG00020011505	-	94	94.886	ENSFCAG00000025473	-	99	94.886	Felis_catus
ENSCAFG00020011505	-	94	66.854	ENSFALG00000008553	-	99	66.854	Ficedula_albicollis
ENSCAFG00020011505	-	94	93.182	ENSFDAG00000000193	-	99	93.182	Fukomys_damarensis
ENSCAFG00020011505	-	90	53.529	ENSFHEG00000016452	nop16	95	53.529	Fundulus_heteroclitus
ENSCAFG00020011505	-	94	73.034	ENSGALG00000003355	-	99	73.034	Gallus_gallus
ENSCAFG00020011505	-	78	52.381	ENSGAFG00000011616	nop16	79	52.381	Gambusia_affinis
ENSCAFG00020011505	-	90	47.647	ENSGACG00000020810	nop16	100	47.647	Gasterosteus_aculeatus
ENSCAFG00020011505	-	90	51.765	ENSGACG00000020819	-	98	51.765	Gasterosteus_aculeatus
ENSCAFG00020011505	-	90	52.353	ENSGACG00000002618	-	98	52.353	Gasterosteus_aculeatus
ENSCAFG00020011505	-	90	51.163	ENSGACG00000003122	-	97	53.043	Gasterosteus_aculeatus
ENSCAFG00020011505	-	90	52.941	ENSHBUG00000013527	nop16	95	52.941	Haplochromis_burtoni
ENSCAFG00020011505	-	94	93.750	ENSHGLG00000013437	NOP16	99	93.750	Heterocephalus_glaber_female
ENSCAFG00020011505	-	94	93.750	ENSHGLG00100011375	NOP16	99	93.750	Heterocephalus_glaber_male
ENSCAFG00020011505	-	90	49.419	ENSHCOG00000019999	nop16	97	48.824	Hippocampus_comes
ENSCAFG00020011505	-	89	46.707	ENSIPUG00000006682	nop16	95	46.707	Ictalurus_punctatus
ENSCAFG00020011505	-	94	94.382	ENSSTOG00000004869	-	99	94.382	Ictidomys_tridecemlineatus
ENSCAFG00020011505	-	94	93.182	ENSJJAG00000017655	Nop16	99	93.182	Jaculus_jaculus
ENSCAFG00020011505	-	90	55.882	ENSKMAG00000006164	nop16	95	55.882	Kryptolebias_marmoratus
ENSCAFG00020011505	-	90	51.765	ENSLBEG00000018355	nop16	78	51.765	Labrus_bergylta
ENSCAFG00020011505	-	94	63.068	ENSLACG00000014884	nop16	99	63.068	Latimeria_chalumnae
ENSCAFG00020011505	-	90	57.647	ENSLOCG00000012348	nop16	94	57.647	Lepisosteus_oculatus
ENSCAFG00020011505	-	94	94.318	ENSLAFG00000017886	-	99	94.318	Loxodonta_africana
ENSCAFG00020011505	-	90	55.294	ENSMAMG00000021868	nop16	95	55.294	Mastacembelus_armatus
ENSCAFG00020011505	-	90	53.529	ENSMZEG00005012112	nop16	95	53.529	Maylandia_zebra
ENSCAFG00020011505	-	53	69.000	ENSMGAG00000004726	-	98	69.000	Meleagris_gallopavo
ENSCAFG00020011505	-	55	89.423	ENSMAUG00000009852	-	98	89.423	Mesocricetus_auratus
ENSCAFG00020011505	-	88	83.735	ENSMAUG00000015569	-	98	83.735	Mesocricetus_auratus
ENSCAFG00020011505	-	94	91.477	ENSMOCG00000020788	Nop16	99	91.477	Microtus_ochrogaster
ENSCAFG00020011505	-	90	51.765	ENSMMOG00000016054	nop16	99	51.765	Mola_mola
ENSCAFG00020011505	-	94	80.899	ENSMODG00000005214	-	99	80.899	Monodelphis_domestica
ENSCAFG00020011505	-	90	50.000	ENSMALG00000021263	nop16	95	50.000	Monopterus_albus
ENSCAFG00020011505	-	98	88.587	MGP_CAROLIEiJ_G0018538	Nop16	99	91.477	Mus_caroli
ENSCAFG00020011505	-	98	89.189	ENSMUSG00000025869	Nop16	99	92.045	Mus_musculus
ENSCAFG00020011505	-	98	90.217	MGP_PahariEiJ_G0019603	Nop16	99	92.045	Mus_pahari
ENSCAFG00020011505	-	98	88.043	MGP_SPRETEiJ_G0019418	Nop16	99	91.477	Mus_spretus
ENSCAFG00020011505	-	94	97.727	ENSMPUG00000012552	-	99	97.727	Mustela_putorius_furo
ENSCAFG00020011505	-	94	93.750	ENSMPUG00000016964	-	99	93.750	Mustela_putorius_furo
ENSCAFG00020011505	-	94	90.909	ENSMLUG00000003504	-	99	90.909	Myotis_lucifugus
ENSCAFG00020011505	-	94	92.614	ENSNGAG00000018045	Nop16	99	92.614	Nannospalax_galili
ENSCAFG00020011505	-	90	52.353	ENSNBRG00000015181	nop16	96	52.353	Neolamprologus_brichardi
ENSCAFG00020011505	-	94	92.614	ENSODEG00000009586	-	99	92.614	Octodon_degus
ENSCAFG00020011505	-	90	55.294	ENSONIG00000016417	nop16	95	55.294	Oreochromis_niloticus
ENSCAFG00020011505	-	94	92.045	ENSOCUG00000013171	-	99	92.045	Oryctolagus_cuniculus
ENSCAFG00020011505	-	90	54.706	ENSORLG00000026611	nop16	95	54.706	Oryzias_latipes
ENSCAFG00020011505	-	90	56.471	ENSOMEG00000023001	nop16	95	56.471	Oryzias_melastigma
ENSCAFG00020011505	-	94	94.318	ENSOGAG00000000824	-	99	94.318	Otolemur_garnettii
ENSCAFG00020011505	-	94	94.318	ENSOARG00000002165	-	99	94.318	Ovis_aries
ENSCAFG00020011505	-	94	95.455	ENSPPAG00000035473	-	99	95.455	Pan_paniscus
ENSCAFG00020011505	-	94	94.886	ENSPPRG00000016600	-	99	94.886	Panthera_pardus
ENSCAFG00020011505	-	94	95.455	ENSPTIG00000011708	-	99	95.455	Panthera_tigris_altaica
ENSCAFG00020011505	-	94	95.455	ENSPTRG00000017560	NOP16	99	95.455	Pan_troglodytes
ENSCAFG00020011505	-	94	52.542	ENSPKIG00000009587	nop16	99	52.542	Paramormyrops_kingsleyae
ENSCAFG00020011505	-	75	66.434	ENSPSIG00000013546	-	99	66.434	Pelodiscus_sinensis
ENSCAFG00020011505	-	88	54.762	ENSPMGG00000003443	nop16	98	54.762	Periophthalmus_magnuspinnatus
ENSCAFG00020011505	-	94	91.477	ENSPEMG00000020268	Nop16	99	91.477	Peromyscus_maniculatus_bairdii
ENSCAFG00020011505	-	94	82.584	ENSPCIG00000009782	-	99	82.584	Phascolarctos_cinereus
ENSCAFG00020011505	-	90	51.765	ENSPFOG00000010549	nop16	95	51.765	Poecilia_formosa
ENSCAFG00020011505	-	73	51.095	ENSPLAG00000007124	nop16	70	51.095	Poecilia_latipinna
ENSCAFG00020011505	-	90	51.765	ENSPMEG00000008611	nop16	95	51.765	Poecilia_mexicana
ENSCAFG00020011505	-	90	51.765	ENSPREG00000012940	nop16	95	51.765	Poecilia_reticulata
ENSCAFG00020011505	-	94	94.886	ENSPPYG00000016070	-	99	94.886	Pongo_abelii
ENSCAFG00020011505	-	90	53.529	ENSPNYG00000013529	nop16	95	53.529	Pundamilia_nyererei
ENSCAFG00020011505	-	88	46.154	ENSPNAG00000016233	nop16	95	46.988	Pygocentrus_nattereri
ENSCAFG00020011505	-	94	92.614	ENSRNOG00000017284	Nop16	99	92.614	Rattus_norvegicus
ENSCAFG00020011505	-	94	82.486	ENSSHAG00000001724	-	99	82.486	Sarcophilus_harrisii
ENSCAFG00020011505	-	85	51.250	ENSSFOG00015010537	nop16	77	50.581	Scleropages_formosus
ENSCAFG00020011505	-	90	52.941	ENSSDUG00000022349	nop16	95	52.941	Seriola_dumerili
ENSCAFG00020011505	-	90	53.529	ENSSLDG00000025171	nop16	95	53.529	Seriola_lalandi_dorsalis
ENSCAFG00020011505	-	86	77.612	ENSSARG00000006699	-	63	77.612	Sorex_araneus
ENSCAFG00020011505	-	94	71.023	ENSSPUG00000006508	-	98	71.023	Sphenodon_punctatus
ENSCAFG00020011505	-	90	54.118	ENSSPAG00000011772	nop16	95	54.118	Stegastes_partitus
ENSCAFG00020011505	-	94	92.614	ENSSSCG00000029577	-	99	92.614	Sus_scrofa
ENSCAFG00020011505	-	94	70.787	ENSTGUG00000000543	-	99	70.787	Taeniopygia_guttata
ENSCAFG00020011505	-	90	54.971	ENSTRUG00000020255	nop16	95	54.971	Takifugu_rubripes
ENSCAFG00020011505	-	90	54.971	ENSTNIG00000007616	nop16	95	54.971	Tetraodon_nigroviridis
ENSCAFG00020011505	-	94	96.023	ENSUAMG00000005139	-	99	96.023	Ursus_americanus
ENSCAFG00020011505	-	100	99.468	ENSVVUG00000001697	-	100	99.468	Vulpes_vulpes
ENSCAFG00020011505	-	87	57.669	ENSXETG00000022342	nop16	95	57.669	Xenopus_tropicalis
ENSCAFG00020011505	-	90	52.632	ENSXCOG00000018829	nop16	97	52.632	Xiphophorus_couchianus
ENSCAFG00020011505	-	90	53.216	ENSXMAG00000029113	nop16	95	53.216	Xiphophorus_maculatus