EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020011572 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 22157 bases
Position: chrQKWQ01001090.1:36770278-36792434
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020014317	TRM13	PF05206.14	1.1e-37	1	1
ENSCAFP00020014320	TRM13	PF05206.14	1.2e-37	1	1
ENSCAFP00020014320	zf-U11-48K	PF05253.12	2.1e-09	1	1
ENSCAFP00020014317	zf-U11-48K	PF05253.12	2.1e-09	1	1
ENSCAFP00020014317	zf-TRM13_CCCH	PF11722.8	1.1e-13	1	1
ENSCAFP00020014320	zf-TRM13_CCCH	PF11722.8	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020016642	TRMT13-201	873	-	ENSCAFP00020014317	290 (aa)	-	-
ENSCAFT00020016645	TRMT13-202	867	-	ENSCAFP00020014320	288 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020011572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020011572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020011572	TRMT13	95	91.636	ENSG00000122435	TRMT13	100	86.364	Homo_sapiens
ENSCAFG00020011572	TRMT13	91	53.952	ENSAPOG00000015131	trmt13	59	54.325	Acanthochromis_polyacanthus
ENSCAFG00020011572	TRMT13	95	94.909	ENSAMEG00000008917	TRMT13	57	95.604	Ailuropoda_melanoleuca
ENSCAFG00020011572	TRMT13	90	58.868	ENSACIG00000005804	trmt13	94	49.630	Amphilophus_citrinellus
ENSCAFG00020011572	TRMT13	90	53.559	ENSAOCG00000023585	trmt13	60	53.559	Amphiprion_ocellaris
ENSCAFG00020011572	TRMT13	90	53.559	ENSAPEG00000004025	trmt13	60	53.559	Amphiprion_percula
ENSCAFG00020011572	TRMT13	94	59.489	ENSATEG00000006597	trmt13	57	59.489	Anabas_testudineus
ENSCAFG00020011572	TRMT13	78	75.446	ENSAPLG00000014924	TRMT13	53	75.446	Anas_platyrhynchos
ENSCAFG00020011572	TRMT13	91	70.611	ENSACAG00000003498	TRMT13	56	70.611	Anolis_carolinensis
ENSCAFG00020011572	TRMT13	95	92.308	ENSANAG00000019525	TRMT13	100	88.182	Aotus_nancymaae
ENSCAFG00020011572	TRMT13	90	60.000	ENSACLG00000020018	trmt13	59	60.000	Astatotilapia_calliptera
ENSCAFG00020011572	TRMT13	90	61.004	ENSAMXG00000017963	trmt13	56	61.004	Astyanax_mexicanus
ENSCAFG00020011572	TRMT13	95	91.575	ENSBTAG00000015781	TRMT13	57	91.575	Bos_taurus
ENSCAFG00020011572	TRMT13	88	32.319	WBGene00013026	Y49A3A.3	64	32.319	Caenorhabditis_elegans
ENSCAFG00020011572	TRMT13	95	89.818	ENSCJAG00000000200	TRMT13	100	93.919	Callithrix_jacchus
ENSCAFG00020011572	TRMT13	95	92.727	ENSCHIG00000015395	TRMT13	57	93.407	Capra_hircus
ENSCAFG00020011572	TRMT13	91	90.076	ENSTSYG00000010811	TRMT13	98	84.848	Carlito_syrichta
ENSCAFG00020011572	TRMT13	76	58.036	ENSCAPG00000009085	TRMT13	55	58.929	Cavia_aperea
ENSCAFG00020011572	TRMT13	95	91.273	ENSCPOG00000000694	TRMT13	57	91.941	Cavia_porcellus
ENSCAFG00020011572	TRMT13	95	91.273	ENSCCAG00000023772	TRMT13	100	87.273	Cebus_capucinus
ENSCAFG00020011572	TRMT13	95	91.273	ENSCATG00000033556	TRMT13	100	87.273	Cercocebus_atys
ENSCAFG00020011572	TRMT13	76	90.909	ENSCLAG00000008220	TRMT13	52	91.743	Chinchilla_lanigera
ENSCAFG00020011572	TRMT13	95	91.636	ENSCSAG00000001506	TRMT13	57	92.308	Chlorocebus_sabaeus
ENSCAFG00020011572	TRMT13	95	73.993	ENSCPBG00000026671	TRMT13	57	74.539	Chrysemys_picta_bellii
ENSCAFG00020011572	TRMT13	95	92.000	ENSCANG00000034659	TRMT13	100	88.182	Colobus_angolensis_palliatus
ENSCAFG00020011572	TRMT13	95	86.813	ENSCGRG00001021601	Trmt13	57	86.813	Cricetulus_griseus_chok1gshd
ENSCAFG00020011572	TRMT13	90	54.826	ENSCSEG00000000591	trmt13	59	54.826	Cynoglossus_semilaevis
ENSCAFG00020011572	TRMT13	95	53.287	ENSCVAG00000017342	trmt13	58	53.287	Cyprinodon_variegatus
ENSCAFG00020011572	TRMT13	90	63.707	ENSDARG00000102846	trmt13	56	63.707	Danio_rerio
ENSCAFG00020011572	TRMT13	100	88.356	ENSDNOG00000001710	TRMT13	89	88.356	Dasypus_novemcinctus
ENSCAFG00020011572	TRMT13	95	88.278	ENSDORG00000015808	Trmt13	57	88.278	Dipodomys_ordii
ENSCAFG00020011572	TRMT13	92	32.404	FBgn0037435	CG18048	65	32.404	Drosophila_melanogaster
ENSCAFG00020011572	TRMT13	95	73.646	ENSETEG00000005819	TRMT13	57	73.646	Echinops_telfairi
ENSCAFG00020011572	TRMT13	89	50.388	ENSEBUG00000014444	trmt13	56	50.388	Eptatretus_burgeri
ENSCAFG00020011572	TRMT13	95	94.909	ENSEASG00005015918	TRMT13	57	95.604	Equus_asinus_asinus
ENSCAFG00020011572	TRMT13	95	94.545	ENSECAG00000022626	TRMT13	57	95.238	Equus_caballus
ENSCAFG00020011572	TRMT13	83	92.500	ENSEEUG00000000294	TRMT13	51	92.500	Erinaceus_europaeus
ENSCAFG00020011572	TRMT13	90	64.093	ENSELUG00000003803	trmt13	55	64.093	Esox_lucius
ENSCAFG00020011572	TRMT13	95	96.364	ENSFCAG00000030618	TRMT13	100	93.636	Felis_catus
ENSCAFG00020011572	TRMT13	94	71.956	ENSFALG00000002424	TRMT13	57	71.956	Ficedula_albicollis
ENSCAFG00020011572	TRMT13	95	91.273	ENSFDAG00000006342	TRMT13	57	91.273	Fukomys_damarensis
ENSCAFG00020011572	TRMT13	90	55.894	ENSFHEG00000022954	trmt13	64	55.894	Fundulus_heteroclitus
ENSCAFG00020011572	TRMT13	89	56.641	ENSGMOG00000013223	trmt13	62	56.641	Gadus_morhua
ENSCAFG00020011572	TRMT13	89	72.374	ENSGALG00000005290	TRMT13	55	72.587	Gallus_gallus
ENSCAFG00020011572	TRMT13	94	52.265	ENSGAFG00000001577	trmt13	83	52.222	Gambusia_affinis
ENSCAFG00020011572	TRMT13	89	56.870	ENSGACG00000013428	trmt13	61	54.182	Gasterosteus_aculeatus
ENSCAFG00020011572	TRMT13	95	74.818	ENSGAGG00000023303	TRMT13	99	75.368	Gopherus_agassizii
ENSCAFG00020011572	TRMT13	95	91.636	ENSGGOG00000005616	TRMT13	100	85.455	Gorilla_gorilla
ENSCAFG00020011572	TRMT13	90	60.000	ENSHBUG00000007754	trmt13	59	60.000	Haplochromis_burtoni
ENSCAFG00020011572	TRMT13	95	91.636	ENSHGLG00000002164	TRMT13	57	91.636	Heterocephalus_glaber_female
ENSCAFG00020011572	TRMT13	95	91.636	ENSHGLG00100001618	TRMT13	57	91.636	Heterocephalus_glaber_male
ENSCAFG00020011572	TRMT13	89	54.826	ENSHCOG00000020553	trmt13	60	54.826	Hippocampus_comes
ENSCAFG00020011572	TRMT13	94	60.741	ENSIPUG00000024787	trmt13	92	59.259	Ictalurus_punctatus
ENSCAFG00020011572	TRMT13	95	92.364	ENSSTOG00000013483	TRMT13	57	93.040	Ictidomys_tridecemlineatus
ENSCAFG00020011572	TRMT13	94	90.406	ENSJJAG00000018012	Trmt13	56	91.011	Jaculus_jaculus
ENSCAFG00020011572	TRMT13	90	54.982	ENSLBEG00000020238	trmt13	58	54.982	Labrus_bergylta
ENSCAFG00020011572	TRMT13	91	68.966	ENSLACG00000013153	TRMT13	55	69.498	Latimeria_chalumnae
ENSCAFG00020011572	TRMT13	90	67.181	ENSLOCG00000000418	trmt13	56	67.181	Lepisosteus_oculatus
ENSCAFG00020011572	TRMT13	95	92.308	ENSMFAG00000034681	TRMT13	100	88.182	Macaca_fascicularis
ENSCAFG00020011572	TRMT13	95	92.308	ENSMMUG00000004243	TRMT13	100	88.182	Macaca_mulatta
ENSCAFG00020011572	TRMT13	95	92.308	ENSMNEG00000036102	TRMT13	100	88.182	Macaca_nemestrina
ENSCAFG00020011572	TRMT13	95	92.000	ENSMLEG00000034258	TRMT13	100	89.091	Mandrillus_leucophaeus
ENSCAFG00020011572	TRMT13	89	56.489	ENSMAMG00000016597	trmt13	55	56.489	Mastacembelus_armatus
ENSCAFG00020011572	TRMT13	90	59.623	ENSMZEG00005020959	trmt13	59	59.623	Maylandia_zebra
ENSCAFG00020011572	TRMT13	78	74.779	ENSMGAG00000006970	TRMT13	54	74.779	Meleagris_gallopavo
ENSCAFG00020011572	TRMT13	94	88.561	ENSMAUG00000010448	Trmt13	56	89.219	Mesocricetus_auratus
ENSCAFG00020011572	TRMT13	95	93.091	ENSMICG00000005283	TRMT13	100	90.909	Microcebus_murinus
ENSCAFG00020011572	TRMT13	94	88.971	ENSMOCG00000019914	Trmt13	57	88.971	Microtus_ochrogaster
ENSCAFG00020011572	TRMT13	93	50.549	ENSMMOG00000007762	trmt13	92	50.549	Mola_mola
ENSCAFG00020011572	TRMT13	94	83.929	ENSMODG00000003646	TRMT13	57	84.672	Monodelphis_domestica
ENSCAFG00020011572	TRMT13	90	56.757	ENSMALG00000020965	trmt13	90	44.286	Monopterus_albus
ENSCAFG00020011572	TRMT13	99	87.108	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.071	Mus_caroli
ENSCAFG00020011572	TRMT13	100	86.458	ENSMUSG00000033439	Trmt13	94	91.071	Mus_musculus
ENSCAFG00020011572	TRMT13	99	88.502	MGP_PahariEiJ_G0027014	Trmt13	93	92.771	Mus_pahari
ENSCAFG00020011572	TRMT13	99	86.760	MGP_SPRETEiJ_G0026518	Trmt13	94	91.071	Mus_spretus
ENSCAFG00020011572	TRMT13	95	91.575	ENSMLUG00000002124	TRMT13	57	91.575	Myotis_lucifugus
ENSCAFG00020011572	TRMT13	90	50.943	ENSNBRG00000006783	trmt13	54	57.741	Neolamprologus_brichardi
ENSCAFG00020011572	TRMT13	95	91.575	ENSNLEG00000035917	TRMT13	100	87.273	Nomascus_leucogenys
ENSCAFG00020011572	TRMT13	86	74.297	ENSMEUG00000013346	-	100	74.297	Notamacropus_eugenii
ENSCAFG00020011572	TRMT13	95	90.476	ENSOPRG00000012048	TRMT13	57	90.476	Ochotona_princeps
ENSCAFG00020011572	TRMT13	58	88.889	ENSODEG00000006075	-	95	88.889	Octodon_degus
ENSCAFG00020011572	TRMT13	90	59.774	ENSONIG00000004574	trmt13	59	59.623	Oreochromis_niloticus
ENSCAFG00020011572	TRMT13	78	81.416	ENSOANG00000012057	TRMT13	52	82.143	Ornithorhynchus_anatinus
ENSCAFG00020011572	TRMT13	95	92.308	ENSOCUG00000023095	TRMT13	57	92.308	Oryctolagus_cuniculus
ENSCAFG00020011572	TRMT13	90	51.504	ENSORLG00000003320	trmt13	57	52.632	Oryzias_latipes
ENSCAFG00020011572	TRMT13	90	51.504	ENSORLG00020005972	trmt13	55	51.504	Oryzias_latipes_hni
ENSCAFG00020011572	TRMT13	90	57.895	ENSORLG00015002270	trmt13	57	57.895	Oryzias_latipes_hsok
ENSCAFG00020011572	TRMT13	90	59.023	ENSOMEG00000006724	trmt13	55	59.023	Oryzias_melastigma
ENSCAFG00020011572	TRMT13	95	92.364	ENSOGAG00000005618	TRMT13	55	93.040	Otolemur_garnettii
ENSCAFG00020011572	TRMT13	95	92.727	ENSOARG00000017983	TRMT13	57	93.407	Ovis_aries
ENSCAFG00020011572	TRMT13	95	91.273	ENSPPAG00000043736	TRMT13	100	86.364	Pan_paniscus
ENSCAFG00020011572	TRMT13	95	96.364	ENSPPRG00000003424	TRMT13	100	93.636	Panthera_pardus
ENSCAFG00020011572	TRMT13	95	96.364	ENSPTIG00000018598	TRMT13	100	93.636	Panthera_tigris_altaica
ENSCAFG00020011572	TRMT13	95	91.273	ENSPTRG00000001001	TRMT13	100	86.364	Pan_troglodytes
ENSCAFG00020011572	TRMT13	95	92.308	ENSPANG00000007598	TRMT13	100	88.182	Papio_anubis
ENSCAFG00020011572	TRMT13	89	61.328	ENSPKIG00000001514	trmt13	57	61.328	Paramormyrops_kingsleyae
ENSCAFG00020011572	TRMT13	84	76.230	ENSPSIG00000012703	TRMT13	58	76.860	Pelodiscus_sinensis
ENSCAFG00020011572	TRMT13	90	55.598	ENSPMGG00000013298	trmt13	54	55.598	Periophthalmus_magnuspinnatus
ENSCAFG00020011572	TRMT13	94	87.132	ENSPEMG00000000275	Trmt13	57	87.132	Peromyscus_maniculatus_bairdii
ENSCAFG00020011572	TRMT13	90	53.558	ENSPMAG00000000823	trmt13	56	53.558	Petromyzon_marinus
ENSCAFG00020011572	TRMT13	93	82.418	ENSPCIG00000007699	TRMT13	57	83.516	Phascolarctos_cinereus
ENSCAFG00020011572	TRMT13	92	54.717	ENSPFOG00000008675	trmt13	58	54.717	Poecilia_formosa
ENSCAFG00020011572	TRMT13	90	54.444	ENSPLAG00000009709	trmt13	60	54.444	Poecilia_latipinna
ENSCAFG00020011572	TRMT13	90	53.704	ENSPMEG00000022954	trmt13	60	53.704	Poecilia_mexicana
ENSCAFG00020011572	TRMT13	93	52.482	ENSPREG00000005645	trmt13	93	49.645	Poecilia_reticulata
ENSCAFG00020011572	TRMT13	95	91.575	ENSPPYG00000001120	TRMT13	57	91.575	Pongo_abelii
ENSCAFG00020011572	TRMT13	95	88.000	ENSPCAG00000002340	TRMT13	57	88.000	Procavia_capensis
ENSCAFG00020011572	TRMT13	95	90.909	ENSPCOG00000017984	TRMT13	100	90.000	Propithecus_coquereli
ENSCAFG00020011572	TRMT13	95	93.091	ENSPVAG00000017430	TRMT13	57	93.773	Pteropus_vampyrus
ENSCAFG00020011572	TRMT13	90	56.604	ENSPNYG00000013690	trmt13	56	58.025	Pundamilia_nyererei
ENSCAFG00020011572	TRMT13	90	61.390	ENSPNAG00000022130	trmt13	56	61.390	Pygocentrus_nattereri
ENSCAFG00020011572	TRMT13	95	87.273	ENSRNOG00000015140	Trmt13	55	87.912	Rattus_norvegicus
ENSCAFG00020011572	TRMT13	95	92.000	ENSRBIG00000037686	TRMT13	100	88.182	Rhinopithecus_bieti
ENSCAFG00020011572	TRMT13	95	92.000	ENSRROG00000044057	TRMT13	100	88.182	Rhinopithecus_roxellana
ENSCAFG00020011572	TRMT13	93	31.193	YOL125W	-	64	31.193	Saccharomyces_cerevisiae
ENSCAFG00020011572	TRMT13	95	92.674	ENSSBOG00000026541	TRMT13	100	88.182	Saimiri_boliviensis_boliviensis
ENSCAFG00020011572	TRMT13	80	84.783	ENSSHAG00000005213	TRMT13	51	85.526	Sarcophilus_harrisii
ENSCAFG00020011572	TRMT13	92	60.902	ENSSFOG00015017560	trmt13	58	60.902	Scleropages_formosus
ENSCAFG00020011572	TRMT13	90	58.491	ENSSMAG00000014592	trmt13	55	58.491	Scophthalmus_maximus
ENSCAFG00020011572	TRMT13	94	54.839	ENSSDUG00000015508	trmt13	57	54.839	Seriola_dumerili
ENSCAFG00020011572	TRMT13	94	54.839	ENSSLDG00000019060	trmt13	58	54.839	Seriola_lalandi_dorsalis
ENSCAFG00020011572	TRMT13	95	74.359	ENSSARG00000010344	TRMT13	56	74.359	Sorex_araneus
ENSCAFG00020011572	TRMT13	89	73.828	ENSSPUG00000016339	TRMT13	55	74.409	Sphenodon_punctatus
ENSCAFG00020011572	TRMT13	89	59.542	ENSSPAG00000011922	trmt13	56	59.542	Stegastes_partitus
ENSCAFG00020011572	TRMT13	95	93.818	ENSSSCG00000006869	TRMT13	57	94.505	Sus_scrofa
ENSCAFG00020011572	TRMT13	91	72.797	ENSTGUG00000005253	TRMT13	56	73.359	Taeniopygia_guttata
ENSCAFG00020011572	TRMT13	91	55.224	ENSTRUG00000008400	trmt13	58	55.224	Takifugu_rubripes
ENSCAFG00020011572	TRMT13	95	85.455	ENSUAMG00000017251	TRMT13	55	85.455	Ursus_americanus
ENSCAFG00020011572	TRMT13	95	94.545	ENSUMAG00000007901	TRMT13	57	95.238	Ursus_maritimus
ENSCAFG00020011572	TRMT13	78	61.778	ENSVPAG00000001034	TRMT13	52	62.332	Vicugna_pacos
ENSCAFG00020011572	TRMT13	95	98.909	ENSVVUG00000021996	TRMT13	74	94.570	Vulpes_vulpes
ENSCAFG00020011572	TRMT13	97	58.511	ENSXETG00000013204	trmt13	61	58.511	Xenopus_tropicalis
ENSCAFG00020011572	TRMT13	90	54.074	ENSXMAG00000010765	trmt13	60	54.074	Xiphophorus_maculatus