EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020012084 (Gene tree)
Gene ID: 112650700
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 85619 bases
Position: chrQKWQ01001739.1:2586905-2672523
Accession: 112650700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020015031	ResIII	PF04851.15	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020017475	-	2739	XM_025433531	ENSCAFP00020015031	912 (aa)	XP_025289315	UPI000DC6C15F

Gene Model

Click here to download ENSCAFG00020012084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020012084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020012084	-	64	32.721	ENSCAFG00020001751	SMARCA1	51	32.554
ENSCAFG00020012084	-	54	31.955	ENSCAFG00020003994	SMARCAD1	57	31.955
ENSCAFG00020012084	-	52	36.715	ENSCAFG00020004809	HELLS	57	36.715
ENSCAFG00020012084	-	68	45.723	ENSCAFG00020015066	RAD54L	84	45.723
ENSCAFG00020012084	-	55	30.934	ENSCAFG00020020121	CHD1L	52	30.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020012084	-	79	88.828	ENSG00000265817	FSBP	99	88.828	Homo_sapiens
ENSCAFG00020012084	-	99	85.275	ENSG00000197275	RAD54B	99	85.275	Homo_sapiens
ENSCAFG00020012084	-	99	93.085	ENSAMEG00000005834	-	100	93.085	Ailuropoda_melanoleuca
ENSCAFG00020012084	-	99	55.277	ENSACIG00000013005	rad54b	99	55.277	Amphilophus_citrinellus
ENSCAFG00020012084	-	99	55.403	ENSAOCG00000008523	rad54b	99	55.403	Amphiprion_ocellaris
ENSCAFG00020012084	-	99	55.847	ENSAPEG00000001673	rad54b	99	56.004	Amphiprion_percula
ENSCAFG00020012084	-	99	55.206	ENSATEG00000001527	rad54b	99	55.206	Anabas_testudineus
ENSCAFG00020012084	-	99	68.525	ENSAPLG00000014366	-	99	68.525	Anas_platyrhynchos
ENSCAFG00020012084	-	87	71.465	ENSACAG00000003671	-	99	71.465	Anolis_carolinensis
ENSCAFG00020012084	-	71	86.111	ENSANAG00000019528	-	99	86.111	Aotus_nancymaae
ENSCAFG00020012084	-	99	55.338	ENSACLG00000007826	rad54b	99	55.338	Astatotilapia_calliptera
ENSCAFG00020012084	-	85	58.333	ENSAMXG00000039985	rad54b	94	58.198	Astyanax_mexicanus
ENSCAFG00020012084	-	99	85.950	ENSBTAG00000000632	RAD54B	100	85.950	Bos_taurus
ENSCAFG00020012084	-	80	35.553	WBGene00013792	Y116A8C.13	86	35.286	Caenorhabditis_elegans
ENSCAFG00020012084	-	99	83.095	ENSCJAG00000000080	-	99	86.759	Callithrix_jacchus
ENSCAFG00020012084	-	100	99.671	ENSCAFG00000009179	RAD54B	100	99.671	Canis_familiaris
ENSCAFG00020012084	-	99	85.291	ENSCHIG00000008230	-	100	85.291	Capra_hircus
ENSCAFG00020012084	-	99	83.974	ENSTSYG00000013234	-	100	83.974	Carlito_syrichta
ENSCAFG00020012084	-	99	80.681	ENSCPOG00000011643	-	99	80.681	Cavia_porcellus
ENSCAFG00020012084	-	99	83.205	ENSCCAG00000011754	-	99	86.759	Cebus_capucinus
ENSCAFG00020012084	-	99	84.945	ENSCATG00000030661	-	99	88.690	Cercocebus_atys
ENSCAFG00020012084	-	99	81.538	ENSCLAG00000010476	-	99	81.538	Chinchilla_lanigera
ENSCAFG00020012084	-	99	85.055	ENSCSAG00000012712	-	99	85.055	Chlorocebus_sabaeus
ENSCAFG00020012084	-	99	68.730	ENSCPBG00000003204	-	99	69.022	Chrysemys_picta_bellii
ENSCAFG00020012084	-	99	85.385	ENSCANG00000017939	-	99	88.828	Colobus_angolensis_palliatus
ENSCAFG00020012084	-	99	77.218	ENSCGRG00001020184	Rad54b	100	77.218	Cricetulus_griseus_chok1gshd
ENSCAFG00020012084	-	99	75.652	ENSCGRG00000016752	Rad54b	100	75.652	Cricetulus_griseus_crigri
ENSCAFG00020012084	-	86	58.890	ENSCSEG00000001601	rad54b	93	58.890	Cynoglossus_semilaevis
ENSCAFG00020012084	-	99	57.746	ENSCVAG00000009200	rad54b	99	57.746	Cyprinodon_variegatus
ENSCAFG00020012084	-	99	53.290	ENSDARG00000092134	rad54b	100	61.043	Danio_rerio
ENSCAFG00020012084	-	99	82.495	ENSDNOG00000015535	-	99	82.495	Dasypus_novemcinctus
ENSCAFG00020012084	-	99	80.044	ENSDORG00000002492	Rad54b	100	80.044	Dipodomys_ordii
ENSCAFG00020012084	-	87	79.545	ENSETEG00000010605	-	100	79.545	Echinops_telfairi
ENSCAFG00020012084	-	99	47.696	ENSEBUG00000009104	rad54b	98	47.696	Eptatretus_burgeri
ENSCAFG00020012084	-	97	85.989	ENSEASG00005004021	-	100	85.989	Equus_asinus_asinus
ENSCAFG00020012084	-	99	86.732	ENSECAG00000021949	-	99	86.732	Equus_caballus
ENSCAFG00020012084	-	83	82.609	ENSEEUG00000008056	-	83	82.609	Erinaceus_europaeus
ENSCAFG00020012084	-	99	54.074	ENSELUG00000009287	rad54b	99	54.286	Esox_lucius
ENSCAFG00020012084	-	99	90.999	ENSFCAG00000015513	-	100	92.837	Felis_catus
ENSCAFG00020012084	-	99	67.576	ENSFALG00000005467	-	99	67.576	Ficedula_albicollis
ENSCAFG00020012084	-	99	82.418	ENSFDAG00000020541	-	100	82.418	Fukomys_damarensis
ENSCAFG00020012084	-	89	57.627	ENSFHEG00000014382	rad54b	90	57.627	Fundulus_heteroclitus
ENSCAFG00020012084	-	86	57.285	ENSGMOG00000014774	rad54b	98	57.285	Gadus_morhua
ENSCAFG00020012084	-	99	67.650	ENSGALG00000043597	RAD54B	99	67.650	Gallus_gallus
ENSCAFG00020012084	-	99	56.441	ENSGAFG00000007901	rad54b	99	56.441	Gambusia_affinis
ENSCAFG00020012084	-	99	56.034	ENSGACG00000009128	rad54b	99	56.022	Gasterosteus_aculeatus
ENSCAFG00020012084	-	99	68.627	ENSGAGG00000018747	-	99	68.627	Gopherus_agassizii
ENSCAFG00020012084	-	99	84.962	ENSGGOG00000023516	-	100	84.962	Gorilla_gorilla
ENSCAFG00020012084	-	100	54.459	ENSHBUG00000016017	rad54b	99	54.459	Haplochromis_burtoni
ENSCAFG00020012084	-	99	81.481	ENSHGLG00000008263	RAD54B	99	81.481	Heterocephalus_glaber_female
ENSCAFG00020012084	-	99	80.736	ENSHGLG00100008108	-	99	80.736	Heterocephalus_glaber_male
ENSCAFG00020012084	-	99	54.545	ENSHCOG00000004764	rad54b	99	55.529	Hippocampus_comes
ENSCAFG00020012084	-	99	53.207	ENSIPUG00000018531	rad54b	99	53.207	Ictalurus_punctatus
ENSCAFG00020012084	-	99	81.567	ENSSTOG00000010791	-	99	81.567	Ictidomys_tridecemlineatus
ENSCAFG00020012084	-	99	78.947	ENSJJAG00000010314	Rad54b	100	78.947	Jaculus_jaculus
ENSCAFG00020012084	-	99	54.575	ENSKMAG00000004744	rad54b	99	54.575	Kryptolebias_marmoratus
ENSCAFG00020012084	-	81	68.984	ENSLACG00000000859	-	100	68.984	Latimeria_chalumnae
ENSCAFG00020012084	-	100	59.023	ENSLOCG00000010100	rad54b	98	62.395	Lepisosteus_oculatus
ENSCAFG00020012084	-	89	83.931	ENSLAFG00000015315	-	100	83.931	Loxodonta_africana
ENSCAFG00020012084	-	99	84.835	ENSMFAG00000031629	-	99	88.414	Macaca_fascicularis
ENSCAFG00020012084	-	99	84.835	ENSMMUG00000005659	-	99	84.835	Macaca_mulatta
ENSCAFG00020012084	-	99	84.835	ENSMNEG00000016408	-	99	84.835	Macaca_nemestrina
ENSCAFG00020012084	-	99	85.275	ENSMLEG00000006946	-	99	85.275	Mandrillus_leucophaeus
ENSCAFG00020012084	-	99	56.156	ENSMAMG00000012269	rad54b	99	56.156	Mastacembelus_armatus
ENSCAFG00020012084	-	99	54.633	ENSMZEG00005005281	rad54b	95	60.076	Maylandia_zebra
ENSCAFG00020012084	-	99	67.760	ENSMGAG00000012024	-	99	67.760	Meleagris_gallopavo
ENSCAFG00020012084	-	99	76.342	ENSMAUG00000013586	Rad54b	100	76.342	Mesocricetus_auratus
ENSCAFG00020012084	-	99	81.538	ENSMICG00000000754	-	99	81.538	Microcebus_murinus
ENSCAFG00020012084	-	99	75.930	ENSMOCG00000020035	Rad54b	99	75.930	Microtus_ochrogaster
ENSCAFG00020012084	-	99	54.437	ENSMMOG00000003394	rad54b	99	54.437	Mola_mola
ENSCAFG00020012084	-	88	76.119	ENSMODG00000007343	-	99	76.119	Monodelphis_domestica
ENSCAFG00020012084	-	71	60.836	ENSMALG00000001520	rad54b	99	60.836	Monopterus_albus
ENSCAFG00020012084	-	99	76.999	MGP_CAROLIEiJ_G0025810	Rad54b	100	76.999	Mus_caroli
ENSCAFG00020012084	-	99	76.864	ENSMUSG00000078773	Rad54b	100	76.864	Mus_musculus
ENSCAFG00020012084	-	99	77.547	MGP_PahariEiJ_G0023933	Rad54b	100	77.547	Mus_pahari
ENSCAFG00020012084	-	99	77.437	MGP_SPRETEiJ_G0026758	Rad54b	100	77.437	Mus_spretus
ENSCAFG00020012084	-	89	92.222	ENSMPUG00000008878	-	100	92.222	Mustela_putorius_furo
ENSCAFG00020012084	-	99	83.772	ENSMLUG00000008953	-	99	83.772	Myotis_lucifugus
ENSCAFG00020012084	-	99	79.630	ENSNGAG00000017537	Rad54b	100	79.630	Nannospalax_galili
ENSCAFG00020012084	-	99	55.180	ENSNBRG00000013394	rad54b	99	55.180	Neolamprologus_brichardi
ENSCAFG00020012084	-	99	84.945	ENSNLEG00000003062	-	99	88.552	Nomascus_leucogenys
ENSCAFG00020012084	-	82	72.541	ENSMEUG00000012426	-	82	72.541	Notamacropus_eugenii
ENSCAFG00020012084	-	89	77.750	ENSODEG00000002650	-	96	84.154	Octodon_degus
ENSCAFG00020012084	-	99	80.482	ENSODEG00000019564	-	100	80.482	Octodon_degus
ENSCAFG00020012084	-	99	55.822	ENSONIG00000006067	rad54b	99	55.822	Oreochromis_niloticus
ENSCAFG00020012084	-	82	75.166	ENSOANG00000011348	-	100	75.166	Ornithorhynchus_anatinus
ENSCAFG00020012084	-	99	82.127	ENSOCUG00000016478	-	99	82.127	Oryctolagus_cuniculus
ENSCAFG00020012084	-	99	55.591	ENSORLG00000008918	rad54b	99	63.369	Oryzias_latipes
ENSCAFG00020012084	-	71	63.369	ENSORLG00020012171	rad54b	99	63.369	Oryzias_latipes_hni
ENSCAFG00020012084	-	99	55.614	ENSORLG00015018536	rad54b	99	55.614	Oryzias_latipes_hsok
ENSCAFG00020012084	-	84	60.516	ENSOMEG00000004345	rad54b	99	60.516	Oryzias_melastigma
ENSCAFG00020012084	-	99	82.876	ENSOGAG00000007854	-	99	82.876	Otolemur_garnettii
ENSCAFG00020012084	-	89	88.192	ENSOARG00000007691	-	100	88.192	Ovis_aries
ENSCAFG00020012084	-	99	83.626	ENSPPAG00000029572	-	99	83.626	Pan_paniscus
ENSCAFG00020012084	-	99	90.889	ENSPPRG00000007571	-	100	92.975	Panthera_pardus
ENSCAFG00020012084	-	80	92.975	ENSPTIG00000012670	-	100	92.975	Panthera_tigris_altaica
ENSCAFG00020012084	-	99	85.055	ENSPTRG00000020427	-	99	88.690	Pan_troglodytes
ENSCAFG00020012084	-	99	85.165	ENSPANG00000019566	-	99	85.165	Papio_anubis
ENSCAFG00020012084	-	99	59.150	ENSPKIG00000014974	rad54b	99	59.150	Paramormyrops_kingsleyae
ENSCAFG00020012084	-	99	66.992	ENSPSIG00000002383	-	98	71.605	Pelodiscus_sinensis
ENSCAFG00020012084	-	99	77.108	ENSPEMG00000012133	Rad54b	100	77.108	Peromyscus_maniculatus_bairdii
ENSCAFG00020012084	-	86	58.427	ENSPMAG00000002916	rad54b	99	58.677	Petromyzon_marinus
ENSCAFG00020012084	-	88	77.750	ENSPCIG00000020151	-	94	77.125	Phascolarctos_cinereus
ENSCAFG00020012084	-	99	55.732	ENSPFOG00000023411	rad54b	99	55.732	Poecilia_formosa
ENSCAFG00020012084	-	99	55.839	ENSPLAG00000010430	rad54b	99	55.685	Poecilia_latipinna
ENSCAFG00020012084	-	99	55.579	ENSPMEG00000016873	rad54b	95	60.049	Poecilia_mexicana
ENSCAFG00020012084	-	99	56.489	ENSPREG00000018443	rad54b	99	56.489	Poecilia_reticulata
ENSCAFG00020012084	-	99	84.835	ENSPPYG00000018750	-	99	84.835	Pongo_abelii
ENSCAFG00020012084	-	99	85.510	ENSPCOG00000026845	-	99	88.276	Propithecus_coquereli
ENSCAFG00020012084	-	87	88.934	ENSPVAG00000000261	-	92	88.934	Pteropus_vampyrus
ENSCAFG00020012084	-	87	59.799	ENSPNYG00000018303	rad54b	96	59.799	Pundamilia_nyererei
ENSCAFG00020012084	-	99	54.054	ENSPNAG00000000295	rad54b	99	54.054	Pygocentrus_nattereri
ENSCAFG00020012084	-	99	74.808	ENSRNOG00000039949	Rad54b	100	74.808	Rattus_norvegicus
ENSCAFG00020012084	-	99	84.835	ENSRBIG00000020419	-	99	84.835	Rhinopithecus_bieti
ENSCAFG00020012084	-	99	84.835	ENSRROG00000039897	-	99	84.835	Rhinopithecus_roxellana
ENSCAFG00020012084	-	62	42.045	YBR073W	RDH54	61	42.045	Saccharomyces_cerevisiae
ENSCAFG00020012084	-	99	83.315	ENSSBOG00000028501	-	99	83.315	Saimiri_boliviensis_boliviensis
ENSCAFG00020012084	-	99	72.628	ENSSHAG00000017038	-	99	72.628	Sarcophilus_harrisii
ENSCAFG00020012084	-	64	65.646	ENSSFOG00015008483	rad54b	91	65.646	Scleropages_formosus
ENSCAFG00020012084	-	99	53.115	ENSSMAG00000018659	rad54b	99	54.426	Scophthalmus_maximus
ENSCAFG00020012084	-	99	54.739	ENSSDUG00000001122	rad54b	98	55.011	Seriola_dumerili
ENSCAFG00020012084	-	99	54.747	ENSSLDG00000013787	rad54b	99	54.747	Seriola_lalandi_dorsalis
ENSCAFG00020012084	-	99	66.813	ENSSPUG00000016497	-	99	66.813	Sphenodon_punctatus
ENSCAFG00020012084	-	99	55.761	ENSSPAG00000012800	rad54b	99	55.761	Stegastes_partitus
ENSCAFG00020012084	-	99	84.615	ENSSSCG00000006101	-	99	88.250	Sus_scrofa
ENSCAFG00020012084	-	99	67.102	ENSTGUG00000011880	-	99	67.102	Taeniopygia_guttata
ENSCAFG00020012084	-	99	53.846	ENSTRUG00000010015	rad54b	99	54.459	Takifugu_rubripes
ENSCAFG00020012084	-	99	82.766	ENSTTRG00000006312	-	100	82.766	Tursiops_truncatus
ENSCAFG00020012084	-	99	93.085	ENSUMAG00000016401	-	100	93.085	Ursus_maritimus
ENSCAFG00020012084	-	99	83.974	ENSVPAG00000003157	-	100	83.974	Vicugna_pacos
ENSCAFG00020012084	-	99	54.775	ENSXETG00000025924	rad54b	99	59.125	Xenopus_tropicalis
ENSCAFG00020012084	-	99	55.713	ENSXMAG00000013141	rad54b	99	55.713	Xiphophorus_maculatus