EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020012622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 885 bases
Position: chrQKWQ01000898.1:85144804-85145688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020015707	RRM_1	PF00076.22	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020018236	-	885	-	ENSCAFP00020015707	294 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020012622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020012622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020012622	-	61	34.211	ENSCAFG00020010699	-	50	34.211
ENSCAFG00020012622	-	61	87.778	ENSCAFG00020006299	-	75	88.636
ENSCAFG00020012622	-	61	66.480	ENSCAFG00020003361	-	82	74.820
ENSCAFG00020012622	-	53	63.743	ENSCAFG00020003488	HNRNPA2B1	51	73.387
ENSCAFG00020012622	-	89	84.791	ENSCAFG00020004585	-	94	84.727
ENSCAFG00020012622	-	60	32.432	ENSCAFG00020025620	MSI2	51	38.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020012622	-	89	80.144	ENSAMEG00000011920	HNRNPA3	92	78.246	Ailuropoda_melanoleuca
ENSCAFG00020012622	-	61	87.778	ENSANAG00000002931	HNRNPA3	93	82.545	Aotus_nancymaae
ENSCAFG00020012622	-	70	67.308	ENSANAG00000023435	-	86	54.138	Aotus_nancymaae
ENSCAFG00020012622	-	61	82.778	ENSANAG00000037566	-	91	78.545	Aotus_nancymaae
ENSCAFG00020012622	-	89	84.791	ENSCAFG00000013497	HNRNPA3	93	84.727	Canis_familiaris
ENSCAFG00020012622	-	89	77.652	ENSTSYG00000026299	HNRNPA3	93	82.246	Carlito_syrichta
ENSCAFG00020012622	-	89	55.682	ENSCCAG00000035178	-	53	68.831	Cebus_capucinus
ENSCAFG00020012622	-	89	73.485	ENSCCAG00000034725	-	95	73.913	Cebus_capucinus
ENSCAFG00020012622	-	94	67.029	ENSCATG00000041727	-	82	69.650	Cercocebus_atys
ENSCAFG00020012622	-	89	64.045	ENSCATG00000042348	-	79	64.516	Cercocebus_atys
ENSCAFG00020012622	-	91	61.538	ENSCATG00000005303	-	53	82.857	Cercocebus_atys
ENSCAFG00020012622	-	92	60.662	ENSCLAG00000015184	-	74	67.399	Chinchilla_lanigera
ENSCAFG00020012622	-	89	77.652	ENSCLAG00000012855	HNRNPA3	92	82.246	Chinchilla_lanigera
ENSCAFG00020012622	-	91	56.667	ENSCLAG00000004953	-	70	51.439	Chinchilla_lanigera
ENSCAFG00020012622	-	89	77.652	ENSCANG00000017508	-	92	74.275	Colobus_angolensis_palliatus
ENSCAFG00020012622	-	89	67.803	ENSCANG00000029162	-	76	68.364	Colobus_angolensis_palliatus
ENSCAFG00020012622	-	64	68.449	ENSCANG00000041842	-	90	55.273	Colobus_angolensis_palliatus
ENSCAFG00020012622	-	93	55.357	ENSCANG00000036899	-	87	60.440	Colobus_angolensis_palliatus
ENSCAFG00020012622	-	94	76.534	ENSCANG00000033385	-	92	81.522	Colobus_angolensis_palliatus
ENSCAFG00020012622	-	89	77.652	ENSCGRG00001008592	Hnrnpa3	93	82.246	Cricetulus_griseus_chok1gshd
ENSCAFG00020012622	-	94	79.000	ENSCGRG00001000079	-	84	79.000	Cricetulus_griseus_chok1gshd
ENSCAFG00020012622	-	65	69.286	ENSCGRG00000006419	-	70	52.000	Cricetulus_griseus_crigri
ENSCAFG00020012622	-	89	77.652	ENSCGRG00000002408	Hnrnpa3	92	82.246	Cricetulus_griseus_crigri
ENSCAFG00020012622	-	55	44.172	ENSDARG00000089302	hnrnpa0a	57	52.846	Danio_rerio
ENSCAFG00020012622	-	89	80.608	ENSDNOG00000019022	HNRNPA3	93	80.727	Dasypus_novemcinctus
ENSCAFG00020012622	-	89	76.046	ENSDORG00000011155	-	93	74.182	Dipodomys_ordii
ENSCAFG00020012622	-	89	59.696	ENSDORG00000024966	-	81	82.143	Dipodomys_ordii
ENSCAFG00020012622	-	62	88.571	ENSEASG00005022530	HNRNPA3	83	79.426	Equus_asinus_asinus
ENSCAFG00020012622	-	89	84.791	ENSFCAG00000012146	HNRNPA3	93	84.727	Felis_catus
ENSCAFG00020012622	-	59	82.857	ENSGGOG00000039142	-	75	70.504	Gorilla_gorilla
ENSCAFG00020012622	-	89	70.881	ENSHGLG00000006166	-	82	73.993	Heterocephalus_glaber_female
ENSCAFG00020012622	-	86	60.079	ENSHGLG00000008275	-	87	63.043	Heterocephalus_glaber_female
ENSCAFG00020012622	-	61	79.444	ENSJJAG00000017527	-	87	72.727	Jaculus_jaculus
ENSCAFG00020012622	-	89	77.652	ENSJJAG00000000149	Hnrnpa3	93	82.246	Jaculus_jaculus
ENSCAFG00020012622	-	89	73.180	ENSMFAG00000031209	-	83	69.963	Macaca_fascicularis
ENSCAFG00020012622	-	89	69.318	ENSMMUG00000045923	-	74	74.275	Macaca_mulatta
ENSCAFG00020012622	-	57	81.437	ENSMMUG00000001858	-	93	80.435	Macaca_mulatta
ENSCAFG00020012622	-	88	71.374	ENSMNEG00000039618	-	84	68.613	Macaca_nemestrina
ENSCAFG00020012622	-	67	61.421	ENSMLEG00000033256	-	52	65.049	Mandrillus_leucophaeus
ENSCAFG00020012622	-	69	71.569	ENSMLEG00000042069	-	69	77.778	Mandrillus_leucophaeus
ENSCAFG00020012622	-	89	63.498	ENSMLEG00000037759	-	89	63.406	Mandrillus_leucophaeus
ENSCAFG00020012622	-	91	71.642	ENSMMOG00000000540	HNRNPA3	58	77.049	Mola_mola
ENSCAFG00020012622	-	58	46.199	ENSMALG00000008866	hnrnpa0b	57	57.724	Monopterus_albus
ENSCAFG00020012622	-	89	77.652	MGP_CAROLIEiJ_G0023678	Hnrnpa3	93	82.246	Mus_caroli
ENSCAFG00020012622	-	89	77.652	ENSMUSG00000059005	Hnrnpa3	93	82.246	Mus_musculus
ENSCAFG00020012622	-	89	76.894	MGP_PahariEiJ_G0025130	Hnrnpa3	93	81.522	Mus_pahari
ENSCAFG00020012622	-	62	70.879	ENSMPUG00000018063	-	70	86.429	Mustela_putorius_furo
ENSCAFG00020012622	-	61	87.778	ENSMPUG00000014103	-	75	88.636	Mustela_putorius_furo
ENSCAFG00020012622	-	59	66.667	ENSMPUG00000009761	-	58	75.194	Mustela_putorius_furo
ENSCAFG00020012622	-	56	70.909	ENSNLEG00000032894	-	73	74.820	Nomascus_leucogenys
ENSCAFG00020012622	-	89	67.424	ENSNLEG00000033890	-	77	73.913	Nomascus_leucogenys
ENSCAFG00020012622	-	92	77.122	ENSNLEG00000015913	-	91	77.899	Nomascus_leucogenys
ENSCAFG00020012622	-	89	75.000	ENSNLEG00000027497	-	77	75.000	Nomascus_leucogenys
ENSCAFG00020012622	-	89	75.000	ENSNLEG00000034545	-	77	74.275	Nomascus_leucogenys
ENSCAFG00020012622	-	91	73.507	ENSODEG00000019611	-	90	79.348	Octodon_degus
ENSCAFG00020012622	-	89	64.639	ENSODEG00000003580	-	73	62.909	Octodon_degus
ENSCAFG00020012622	-	89	80.989	ENSODEG00000003691	-	92	81.522	Octodon_degus
ENSCAFG00020012622	-	89	82.510	ENSODEG00000003755	-	91	78.182	Octodon_degus
ENSCAFG00020012622	-	61	83.425	ENSODEG00000006322	-	91	77.536	Octodon_degus
ENSCAFG00020012622	-	89	76.136	ENSODEG00000019156	-	93	80.435	Octodon_degus
ENSCAFG00020012622	-	94	52.459	ENSOCUG00000005703	-	72	52.459	Oryctolagus_cuniculus
ENSCAFG00020012622	-	60	88.496	ENSOARG00000013451	-	81	85.593	Ovis_aries
ENSCAFG00020012622	-	83	76.327	ENSPPAG00000040512	-	82	76.265	Pan_paniscus
ENSCAFG00020012622	-	94	73.188	ENSPPAG00000007933	-	94	73.188	Pan_paniscus
ENSCAFG00020012622	-	61	87.778	ENSPPRG00000022322	HNRNPA3	93	83.032	Panthera_pardus
ENSCAFG00020012622	-	89	84.791	ENSPPRG00000022225	-	86	84.727	Panthera_pardus
ENSCAFG00020012622	-	89	75.781	ENSPPRG00000015090	-	68	76.230	Panthera_pardus
ENSCAFG00020012622	-	89	84.791	ENSPTIG00000008598	HNRNPA3	86	84.727	Panthera_tigris_altaica
ENSCAFG00020012622	-	89	64.885	ENSPTRG00000052291	-	65	82.143	Pan_troglodytes
ENSCAFG00020012622	-	94	73.188	ENSPTRG00000048252	-	92	73.188	Pan_troglodytes
ENSCAFG00020012622	-	87	75.097	ENSPTRG00000045033	-	82	75.875	Pan_troglodytes
ENSCAFG00020012622	-	62	65.385	ENSPTRG00000018253	-	99	63.953	Pan_troglodytes
ENSCAFG00020012622	-	72	66.509	ENSPANG00000019564	-	69	65.094	Papio_anubis
ENSCAFG00020012622	-	89	69.697	ENSPANG00000034171	-	77	74.638	Papio_anubis
ENSCAFG00020012622	-	89	63.670	ENSPANG00000035630	-	89	63.571	Papio_anubis
ENSCAFG00020012622	-	74	68.807	ENSPANG00000022665	-	55	79.286	Papio_anubis
ENSCAFG00020012622	-	89	77.652	ENSPEMG00000021885	Hnrnpa3	92	82.246	Peromyscus_maniculatus_bairdii
ENSCAFG00020012622	-	89	79.848	ENSPEMG00000018087	-	91	75.273	Peromyscus_maniculatus_bairdii
ENSCAFG00020012622	-	89	76.336	ENSPEMG00000014669	-	84	70.290	Peromyscus_maniculatus_bairdii
ENSCAFG00020012622	-	80	66.667	ENSPPYG00000001212	-	89	65.106	Pongo_abelii
ENSCAFG00020012622	-	90	64.906	ENSPCOG00000020527	-	75	63.060	Propithecus_coquereli
ENSCAFG00020012622	-	89	77.652	ENSRNOG00000052968	Hnrnpa3	93	82.246	Rattus_norvegicus
ENSCAFG00020012622	-	89	82.510	ENSRNOG00000038905	AABR07048397.1	92	81.159	Rattus_norvegicus
ENSCAFG00020012622	-	100	68.027	ENSRBIG00000038007	-	97	68.027	Rhinopithecus_bieti
ENSCAFG00020012622	-	89	73.004	ENSRBIG00000041913	-	90	76.449	Rhinopithecus_bieti
ENSCAFG00020012622	-	100	66.667	ENSRBIG00000037409	-	76	64.286	Rhinopithecus_bieti
ENSCAFG00020012622	-	89	72.243	ENSRROG00000033280	-	91	69.818	Rhinopithecus_roxellana
ENSCAFG00020012622	-	89	77.186	ENSRROG00000045511	-	94	80.797	Rhinopithecus_roxellana
ENSCAFG00020012622	-	97	66.316	ENSRROG00000035998	-	77	63.860	Rhinopithecus_roxellana
ENSCAFG00020012622	-	89	70.076	ENSRROG00000041363	-	77	70.909	Rhinopithecus_roxellana
ENSCAFG00020012622	-	89	81.749	ENSRROG00000040987	-	94	80.435	Rhinopithecus_roxellana
ENSCAFG00020012622	-	78	50.198	ENSSBOG00000020259	-	87	56.420	Saimiri_boliviensis_boliviensis
ENSCAFG00020012622	-	68	69.154	ENSSSCG00000036878	-	72	61.650	Sus_scrofa
ENSCAFG00020012622	-	89	77.273	ENSTTRG00000014225	-	93	81.884	Tursiops_truncatus
ENSCAFG00020012622	-	94	68.841	ENSTTRG00000015563	-	89	69.928	Tursiops_truncatus
ENSCAFG00020012622	-	89	81.369	ENSVVUG00000012651	-	91	78.545	Vulpes_vulpes
ENSCAFG00020012622	-	89	77.186	ENSVVUG00000014202	-	93	77.455	Vulpes_vulpes