EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020012800 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 2813 bases
Position: chrQKWQ01000898.1:89124963-89127775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020015942	LSM	PF01423.22	6.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020018511	-	387	-	ENSCAFP00020015942	128 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020012800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020012800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020012800	-	63	36.585	ENSCAFG00020001822	LSM1	61	36.585
ENSCAFG00020012800	-	55	38.272	ENSCAFG00020016234	-	97	33.333
ENSCAFG00020012800	-	66	98.824	ENSCAFG00020007643	-	89	98.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020012800	-	66	98.824	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSCAFG00020012800	-	66	91.765	ENSAPOG00000008649	lsm8	89	91.765	Acanthochromis_polyacanthus
ENSCAFG00020012800	-	66	98.824	ENSAMEG00000001162	LSM8	89	98.824	Ailuropoda_melanoleuca
ENSCAFG00020012800	-	50	96.875	ENSACIG00000014694	lsm8	85	96.875	Amphilophus_citrinellus
ENSCAFG00020012800	-	66	91.765	ENSAOCG00000013926	lsm8	89	91.765	Amphiprion_ocellaris
ENSCAFG00020012800	-	66	91.765	ENSAPEG00000023502	lsm8	89	91.765	Amphiprion_percula
ENSCAFG00020012800	-	50	96.875	ENSATEG00000023432	lsm8	85	96.875	Anabas_testudineus
ENSCAFG00020012800	-	62	93.671	ENSAPLG00000005115	LSM8	80	93.671	Anas_platyrhynchos
ENSCAFG00020012800	-	66	98.824	ENSANAG00000027771	LSM8	89	98.824	Aotus_nancymaae
ENSCAFG00020012800	-	66	91.765	ENSACLG00000011253	lsm8	89	91.765	Astatotilapia_calliptera
ENSCAFG00020012800	-	66	94.118	ENSAMXG00000042902	lsm8	89	94.118	Astyanax_mexicanus
ENSCAFG00020012800	-	66	98.824	ENSBTAG00000012649	LSM8	89	98.824	Bos_taurus
ENSCAFG00020012800	-	66	60.000	WBGene00003082	lsm-8	87	60.000	Caenorhabditis_elegans
ENSCAFG00020012800	-	66	98.824	ENSCJAG00000046406	LSM8	89	98.824	Callithrix_jacchus
ENSCAFG00020012800	-	66	98.824	ENSCAFG00000016459	LSM8	86	98.824	Canis_familiaris
ENSCAFG00020012800	-	69	84.091	ENSCHIG00000014201	LSM8	94	84.091	Capra_hircus
ENSCAFG00020012800	-	66	98.824	ENSTSYG00000032434	LSM8	89	98.824	Carlito_syrichta
ENSCAFG00020012800	-	58	83.784	ENSCAPG00000008253	LSM8	100	83.784	Cavia_aperea
ENSCAFG00020012800	-	66	98.824	ENSCPOG00000035673	LSM8	89	98.824	Cavia_porcellus
ENSCAFG00020012800	-	66	98.824	ENSCCAG00000021329	LSM8	89	98.824	Cebus_capucinus
ENSCAFG00020012800	-	66	98.824	ENSCATG00000045302	LSM8	89	98.824	Cercocebus_atys
ENSCAFG00020012800	-	66	98.824	ENSCLAG00000003726	LSM8	89	98.824	Chinchilla_lanigera
ENSCAFG00020012800	-	66	98.824	ENSCSAG00000010802	-	89	98.824	Chlorocebus_sabaeus
ENSCAFG00020012800	-	66	94.118	ENSCSAG00000019007	-	89	94.118	Chlorocebus_sabaeus
ENSCAFG00020012800	-	66	87.059	ENSCPBG00000008154	LSM8	87	87.059	Chrysemys_picta_bellii
ENSCAFG00020012800	-	75	69.792	ENSCING00000024877	-	100	69.792	Ciona_intestinalis
ENSCAFG00020012800	-	66	98.824	ENSCANG00000040728	LSM8	89	98.824	Colobus_angolensis_palliatus
ENSCAFG00020012800	-	66	98.824	ENSCGRG00001000450	Lsm8	89	98.824	Cricetulus_griseus_chok1gshd
ENSCAFG00020012800	-	66	87.059	ENSCGRG00000005587	Lsm8	100	87.059	Cricetulus_griseus_crigri
ENSCAFG00020012800	-	66	78.824	ENSCSEG00000004164	lsm8	88	78.824	Cynoglossus_semilaevis
ENSCAFG00020012800	-	66	90.588	ENSCVAG00000020547	lsm8	89	90.588	Cyprinodon_variegatus
ENSCAFG00020012800	-	66	90.588	ENSDARG00000091656	lsm8	89	90.588	Danio_rerio
ENSCAFG00020012800	-	66	98.824	ENSDNOG00000034613	LSM8	89	98.824	Dasypus_novemcinctus
ENSCAFG00020012800	-	66	98.824	ENSDORG00000027868	Lsm8	89	98.824	Dipodomys_ordii
ENSCAFG00020012800	-	65	68.675	FBgn0035271	CG2021	87	68.675	Drosophila_melanogaster
ENSCAFG00020012800	-	66	98.824	ENSETEG00000011594	LSM8	89	98.824	Echinops_telfairi
ENSCAFG00020012800	-	75	88.542	ENSEASG00005008932	LSM8	62	88.542	Equus_asinus_asinus
ENSCAFG00020012800	-	69	84.091	ENSECAG00000024025	LSM8	80	84.091	Equus_caballus
ENSCAFG00020012800	-	66	91.765	ENSELUG00000010138	lsm8	89	91.765	Esox_lucius
ENSCAFG00020012800	-	62	74.684	ENSFCAG00000044794	-	80	74.684	Felis_catus
ENSCAFG00020012800	-	66	98.824	ENSFCAG00000036620	-	89	98.824	Felis_catus
ENSCAFG00020012800	-	66	98.824	ENSFALG00000010023	LSM8	89	98.824	Ficedula_albicollis
ENSCAFG00020012800	-	66	98.824	ENSFDAG00000019530	LSM8	89	98.824	Fukomys_damarensis
ENSCAFG00020012800	-	66	91.765	ENSFHEG00000013729	lsm8	89	91.765	Fundulus_heteroclitus
ENSCAFG00020012800	-	66	98.824	ENSGALG00000009110	LSM8	89	98.824	Gallus_gallus
ENSCAFG00020012800	-	66	90.588	ENSGAFG00000001135	lsm8	89	90.588	Gambusia_affinis
ENSCAFG00020012800	-	66	98.824	ENSGAGG00000017366	LSM8	89	98.824	Gopherus_agassizii
ENSCAFG00020012800	-	66	98.824	ENSGGOG00000041883	LSM8	89	98.824	Gorilla_gorilla
ENSCAFG00020012800	-	66	91.765	ENSHBUG00000003646	lsm8	89	91.765	Haplochromis_burtoni
ENSCAFG00020012800	-	53	100.000	ENSHGLG00000001988	-	99	100.000	Heterocephalus_glaber_female
ENSCAFG00020012800	-	66	92.941	ENSHGLG00000019782	-	89	92.941	Heterocephalus_glaber_female
ENSCAFG00020012800	-	66	94.118	ENSHGLG00100012166	-	88	94.118	Heterocephalus_glaber_male
ENSCAFG00020012800	-	66	97.647	ENSHGLG00100003934	-	85	97.647	Heterocephalus_glaber_male
ENSCAFG00020012800	-	66	90.588	ENSHCOG00000005037	lsm8	89	90.588	Hippocampus_comes
ENSCAFG00020012800	-	66	94.118	ENSIPUG00000019811	NAA38	89	94.118	Ictalurus_punctatus
ENSCAFG00020012800	-	67	80.899	ENSSTOG00000034801	-	82	80.899	Ictidomys_tridecemlineatus
ENSCAFG00020012800	-	66	98.824	ENSSTOG00000009039	LSM8	89	98.824	Ictidomys_tridecemlineatus
ENSCAFG00020012800	-	66	98.824	ENSJJAG00000009031	Lsm8	88	98.824	Jaculus_jaculus
ENSCAFG00020012800	-	66	91.765	ENSKMAG00000018983	lsm8	89	91.765	Kryptolebias_marmoratus
ENSCAFG00020012800	-	66	94.118	ENSLACG00000010231	LSM8	89	94.118	Latimeria_chalumnae
ENSCAFG00020012800	-	66	92.941	ENSLOCG00000015580	lsm8	89	92.941	Lepisosteus_oculatus
ENSCAFG00020012800	-	66	97.674	ENSLAFG00000011242	LSM8	89	97.674	Loxodonta_africana
ENSCAFG00020012800	-	66	94.118	ENSMFAG00000013044	-	89	94.118	Macaca_fascicularis
ENSCAFG00020012800	-	66	98.824	ENSMFAG00000035798	LSM8	89	98.824	Macaca_fascicularis
ENSCAFG00020012800	-	66	98.824	ENSMMUG00000046401	LSM8	100	82.432	Macaca_mulatta
ENSCAFG00020012800	-	66	98.824	ENSMNEG00000036764	-	89	98.824	Macaca_nemestrina
ENSCAFG00020012800	-	59	81.333	ENSMNEG00000011141	-	100	81.333	Macaca_nemestrina
ENSCAFG00020012800	-	66	98.824	ENSMLEG00000035828	-	89	98.824	Mandrillus_leucophaeus
ENSCAFG00020012800	-	66	83.529	ENSMLEG00000039324	-	88	83.529	Mandrillus_leucophaeus
ENSCAFG00020012800	-	50	96.875	ENSMAMG00000018839	lsm8	85	96.875	Mastacembelus_armatus
ENSCAFG00020012800	-	66	91.765	ENSMZEG00005019138	lsm8	89	91.765	Maylandia_zebra
ENSCAFG00020012800	-	66	98.824	ENSMGAG00000008808	LSM8	89	98.824	Meleagris_gallopavo
ENSCAFG00020012800	-	66	81.176	ENSMAUG00000015356	-	87	81.176	Mesocricetus_auratus
ENSCAFG00020012800	-	56	80.556	ENSMAUG00000020287	-	100	78.378	Mesocricetus_auratus
ENSCAFG00020012800	-	66	98.824	ENSMAUG00000015721	-	89	98.824	Mesocricetus_auratus
ENSCAFG00020012800	-	66	98.824	ENSMICG00000042730	LSM8	89	98.824	Microcebus_murinus
ENSCAFG00020012800	-	66	98.824	ENSMOCG00000001688	Lsm8	89	98.824	Microtus_ochrogaster
ENSCAFG00020012800	-	50	96.875	ENSMMOG00000006046	lsm8	85	96.875	Mola_mola
ENSCAFG00020012800	-	55	90.141	ENSMODG00000015729	LSM8	91	90.141	Monodelphis_domestica
ENSCAFG00020012800	-	66	92.941	ENSMALG00000000405	lsm8	89	92.941	Monopterus_albus
ENSCAFG00020012800	-	66	98.824	MGP_CAROLIEiJ_G0028125	-	89	98.824	Mus_caroli
ENSCAFG00020012800	-	66	98.824	ENSMUSG00000044155	Lsm8	89	98.824	Mus_musculus
ENSCAFG00020012800	-	66	98.824	MGP_PahariEiJ_G0021881	Lsm8	89	98.824	Mus_pahari
ENSCAFG00020012800	-	66	98.824	MGP_SPRETEiJ_G0029125	-	89	98.824	Mus_spretus
ENSCAFG00020012800	-	66	97.647	ENSMLUG00000027762	-	89	97.647	Myotis_lucifugus
ENSCAFG00020012800	-	66	98.824	ENSMLUG00000006837	-	89	98.824	Myotis_lucifugus
ENSCAFG00020012800	-	66	98.824	ENSNGAG00000016554	Lsm8	89	98.824	Nannospalax_galili
ENSCAFG00020012800	-	66	91.765	ENSNBRG00000014441	lsm8	89	91.765	Neolamprologus_brichardi
ENSCAFG00020012800	-	66	98.824	ENSNLEG00000011768	LSM8	89	98.824	Nomascus_leucogenys
ENSCAFG00020012800	-	66	85.882	ENSMEUG00000007801	LSM8	88	85.882	Notamacropus_eugenii
ENSCAFG00020012800	-	66	87.059	ENSOPRG00000014809	LSM8	100	87.059	Ochotona_princeps
ENSCAFG00020012800	-	66	98.824	ENSODEG00000000418	-	89	98.824	Octodon_degus
ENSCAFG00020012800	-	66	81.176	ENSODEG00000020290	-	99	81.176	Octodon_degus
ENSCAFG00020012800	-	66	97.647	ENSOANG00000014536	LSM8	89	97.647	Ornithorhynchus_anatinus
ENSCAFG00020012800	-	66	97.674	ENSOCUG00000017359	LSM8	89	97.674	Oryctolagus_cuniculus
ENSCAFG00020012800	-	66	80.000	ENSORLG00000017432	lsm8	88	80.000	Oryzias_latipes
ENSCAFG00020012800	-	66	80.000	ENSORLG00020004376	lsm8	88	80.000	Oryzias_latipes_hni
ENSCAFG00020012800	-	66	91.765	ENSORLG00015003757	lsm8	89	91.765	Oryzias_latipes_hsok
ENSCAFG00020012800	-	66	77.647	ENSOMEG00000022509	lsm8	88	78.824	Oryzias_melastigma
ENSCAFG00020012800	-	66	98.824	ENSOGAG00000013377	LSM8	89	98.824	Otolemur_garnettii
ENSCAFG00020012800	-	66	98.824	ENSOARG00000017974	LSM8	89	98.824	Ovis_aries
ENSCAFG00020012800	-	59	85.333	ENSPPAG00000043228	-	100	85.333	Pan_paniscus
ENSCAFG00020012800	-	66	98.824	ENSPPRG00000006444	LSM8	89	98.824	Panthera_pardus
ENSCAFG00020012800	-	66	98.824	ENSPTIG00000004722	LSM8	94	98.529	Panthera_tigris_altaica
ENSCAFG00020012800	-	59	85.333	ENSPTRG00000046596	-	100	85.333	Pan_troglodytes
ENSCAFG00020012800	-	66	94.118	ENSPANG00000019395	-	89	94.118	Papio_anubis
ENSCAFG00020012800	-	66	98.824	ENSPANG00000035470	-	89	98.824	Papio_anubis
ENSCAFG00020012800	-	58	97.297	ENSPKIG00000006092	lsm8	75	97.297	Paramormyrops_kingsleyae
ENSCAFG00020012800	-	59	85.333	ENSPSIG00000017054	LSM8	100	85.333	Pelodiscus_sinensis
ENSCAFG00020012800	-	50	96.875	ENSPMGG00000016442	lsm8	85	96.875	Periophthalmus_magnuspinnatus
ENSCAFG00020012800	-	58	82.432	ENSPEMG00000009153	Lsm8	100	82.432	Peromyscus_maniculatus_bairdii
ENSCAFG00020012800	-	66	98.824	ENSPCIG00000021467	LSM8	89	98.824	Phascolarctos_cinereus
ENSCAFG00020012800	-	66	90.588	ENSPFOG00000012340	lsm8	89	90.588	Poecilia_formosa
ENSCAFG00020012800	-	66	83.529	ENSPLAG00000000516	lsm8	89	83.529	Poecilia_latipinna
ENSCAFG00020012800	-	66	90.588	ENSPMEG00000022567	lsm8	89	90.588	Poecilia_mexicana
ENSCAFG00020012800	-	66	98.824	ENSPPYG00000017942	LSM8	89	98.824	Pongo_abelii
ENSCAFG00020012800	-	66	98.824	ENSPCOG00000003309	-	89	98.824	Propithecus_coquereli
ENSCAFG00020012800	-	66	76.471	ENSPCOG00000017982	-	87	76.471	Propithecus_coquereli
ENSCAFG00020012800	-	66	85.882	ENSPVAG00000000990	LSM8	100	85.882	Pteropus_vampyrus
ENSCAFG00020012800	-	66	91.765	ENSPNYG00000011448	lsm8	89	91.765	Pundamilia_nyererei
ENSCAFG00020012800	-	66	94.118	ENSPNAG00000010252	lsm8	89	94.118	Pygocentrus_nattereri
ENSCAFG00020012800	-	66	98.824	ENSRNOG00000058677	Lsm8	89	98.824	Rattus_norvegicus
ENSCAFG00020012800	-	66	98.824	ENSRBIG00000032851	LSM8	89	98.824	Rhinopithecus_bieti
ENSCAFG00020012800	-	66	98.824	ENSRROG00000039618	LSM8	89	98.824	Rhinopithecus_roxellana
ENSCAFG00020012800	-	66	98.824	ENSSBOG00000023223	LSM8	89	98.824	Saimiri_boliviensis_boliviensis
ENSCAFG00020012800	-	66	98.824	ENSSHAG00000018435	-	89	98.824	Sarcophilus_harrisii
ENSCAFG00020012800	-	66	91.765	ENSSFOG00015004412	lsm8	89	91.765	Scleropages_formosus
ENSCAFG00020012800	-	59	82.667	ENSSMAG00000009458	lsm8	100	82.667	Scophthalmus_maximus
ENSCAFG00020012800	-	66	91.765	ENSSDUG00000014702	lsm8	89	91.765	Seriola_dumerili
ENSCAFG00020012800	-	50	96.875	ENSSLDG00000016870	lsm8	85	96.875	Seriola_lalandi_dorsalis
ENSCAFG00020012800	-	66	98.824	ENSSPUG00000017419	LSM8	89	98.824	Sphenodon_punctatus
ENSCAFG00020012800	-	66	91.765	ENSSPAG00000021422	lsm8	89	91.765	Stegastes_partitus
ENSCAFG00020012800	-	66	98.824	ENSSSCG00000021652	LSM8	89	98.824	Sus_scrofa
ENSCAFG00020012800	-	66	97.647	ENSTGUG00000004730	-	89	97.647	Taeniopygia_guttata
ENSCAFG00020012800	-	66	96.471	ENSTGUG00000016823	-	89	96.471	Taeniopygia_guttata
ENSCAFG00020012800	-	66	91.765	ENSTRUG00000025192	lsm8	89	91.765	Takifugu_rubripes
ENSCAFG00020012800	-	66	91.765	ENSTNIG00000002864	lsm8	89	91.765	Tetraodon_nigroviridis
ENSCAFG00020012800	-	66	98.824	ENSTTRG00000001023	LSM8	89	98.824	Tursiops_truncatus
ENSCAFG00020012800	-	69	84.091	ENSUAMG00000006943	-	92	84.091	Ursus_americanus
ENSCAFG00020012800	-	69	84.091	ENSUMAG00000003073	LSM8	94	84.091	Ursus_maritimus
ENSCAFG00020012800	-	66	98.824	ENSVPAG00000001530	LSM8	89	98.824	Vicugna_pacos
ENSCAFG00020012800	-	59	84.000	ENSVVUG00000013248	-	82	84.000	Vulpes_vulpes
ENSCAFG00020012800	-	61	97.436	ENSXETG00000021829	lsm8	80	97.436	Xenopus_tropicalis
ENSCAFG00020012800	-	66	88.235	ENSXCOG00000012938	lsm8	88	88.235	Xiphophorus_couchianus
ENSCAFG00020012800	-	66	90.588	ENSXMAG00000025919	lsm8	89	90.588	Xiphophorus_maculatus